Definition Shewanella oneidensis MR-1, complete genome.
Accession NC_004347
Length 4,969,803

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Identifier: 24374604

GI number:

Start: 3205035

End: 3209303

Strand: Direct

Name: Not Available

Synonym: SO_3084

Alternate gene names: NA

Gene position: NA

Preceding gene: 24374603

Following gene: 24374605

Centisome position: NA

GC content: NA

Gene sequence:

>4269_bases
ATGCCGAAAGTACTCTTAAAAATTTTCATCTACAGTTGCCTATGCCTAAGCACCTTGTATCCATCAGATTCTATTGCAAT
ATATTCTAAGGAGCTCGACTCATCCATAGTTTTGAATTCAAACCTATTTGGAGTTCCGCAAGGTCTTTCACAAGGAACAG
TAACCTCGATTGTTCAAGATAATGATGGATACCTATGGATAGGTACATTTAATGGTCTTAATCGCTTTGATGGAAGCAAC
TTCAAATATTTTTTCGCTGATGGAACAAATTCAGGACTCCCTAGCTCTTTTATTCGAAGTTTACAAATTGATAAGAATGG
CATTCTATATGTAGGAACTGACAATGGCCTAGCTGTATATGATAAGAACAACGATTCCTTCATTAAATACGGAGCACCAC
TAGACAACACTCCAATCTGGAGTATAAATACCACTATTGAAACCTTAATTGTTGGCACCAACAACGCAATCATTGACATC
CATGGAAAAGAGAACCATCTAGACCTATCGTCTAAAGGGATTGGTGAAATAAAAAAATCTATCAAAATTGGTGATGATTA
TTTTTTAAAGGATTACTCCGGAAAATTATTTAAAATAAATCAAGAAAGTTCAATCTTAATAAAAGAAAACATTATCGACA
TTGAACAAAAAAACAATAAATCTCTAATTATATCCACAAAAGATGGACTTTTTGAATATGATGGCGTTTTGATAAATAGA
ATTGACAACCGTTCTTTTTCACAGCTTGCAAAGAACAATAACACCATCTATGGCATCTCTGAAAACTACATTATTGACAT
CAACAATAAAAAAACGATAGGACTAATTTCAGCATTCAACCCAGATAAAACCACCGTTTTTTATGCCAACAATAACTTTT
TTACACTAGGAAGTGTAGATCAAGGTTTTTTTATCATAAAAAAACAAAATAACTTAGTCAAAAAAACCTCTCTAACAACT
AATAGCACTTGGCATTTAAGTAAAAACTCTCAAGGTTTTCTAGTTTCATCAGAAGCTGAAAAAATAACCTTATTCAACAA
TGAATTCAAAAAAATTAGAGATTACAACACATATACCACAGGATATAAATATGCATTACTCCATAAAAACCAGCTTTTAT
ATGGAACAAGTAATGGATTGTTTTTGGATAATAGTAATTCTGTAAAAAAACTTAGCAATGAAACCATATCAGCATTGTCA
AGTAATGAAGATGATTCTATTTTATCAGCTGGAACCCCCGATGGTAAAATCTTAATAATAAAAAACTCAGAAATAATAAA
AACTTTTAACACAGAAAGGAAGGAACCTATTTTTGATATTGAAACCATATCAGAAAACTTGTTTTATATAGCCAGTCAGG
GAGGACTTAGAAAGTATGACAACGGTCAGGAAACACTTATAAGCGAGCAACTGACATATAGTATTCAAAAAGATAGAAAT
TATTTATTATTCGGCACATCAAAAGCCTTAATGCGTTATGATATAACTAATGAAAAAATAGACACCTTATTCTCAAAAAA
TAAAGAAATCTACTCAATTGCAAGTGATACCAACTTTATTACTGTTTCATCATTAGGAGAGGTAATTATTTTTGATAAGA
ATAGTAAAACTTCTTATGCGCTGGGAACATCAAATGGGAGTCAATATGAATACAACTCACCTAGCGCAATAAAAATTAAT
GATTTTATATTGTTGGCAGGAATTAACGGGGTAAGCTTAGTATCTCCACAAGAAATTTCTGATTATATAAAAAGTCAAAA
AGCAAACAAAACAGAAATATCTAAATTTTCCGTTTTCAACATGAGTCAAGAAAAAAATGGAAAGTATTTAAAAAAACCAA
TCGATGTAACAAAAGAAATAACACTTAAATATTCAGACTATCCATTTTCTTTTGATTTCATATCTCCTATGTCTGATGAA
TCATCTACTAACTACTACTACAGAATGCTAGGGTTGTCTGATACTTGGATTTACTCTAATGGAACAAACTCCGCAACCTA
TACCAACCTATCTCCTGGCGAATACGTATTTCAGGTTTACACCATAAATAATCTTTCAGGCGAAAAATCATCTGAGAGAG
AAGTTAACGTAATAATTACGCCTCCTTGGTGGTCATCTACTCAAGCCAAAATATTTTATTTTTTAATAACAATGTTTTTG
TCCCTATTTATATTCAAAGCAATTCTTCGTAAAAGAGAAATTCAGCGTCAAATTGCTTTGAGTGAAGAACGACTAAAGCT
ATCTCTATGGGGCAGCGGTGATGAAATGTGGGACTGGGATATAGAAACGGGTAATATTTTCCGCTCGAATATTTGGGGTG
CATTAGAGTTCCCACGAGATGGACATCGCTCGGGTAATCGAGATGAAGAAAGTAATATACATCCCATGGATCAAGAACGC
GTTAGAGAAGCACTAAATAAACACTTCTATGGTGAGACAGATCATTTCGAAGCGGCATATAGAGTTAAAGGCAAAGATGA
TAGTTGGATATGGATTTTAGATAGGGCTAAAATTGTAGAACGAGATGATAAAGACAACGCTCTACGAATGACTGGCACTA
TTAAAAATATCAGTCAATTTAAACAAAAAGAAGAACAATTAAGACTCTTCGAAAAAGCGATTGAAAATATTTCTGAAGGT
ATGTTTATTCTTGACAGTGAATACCGTTTCGTAGAAGTGAACGAGGCTTGCTGTAGAATATCACAACGAAATAGGTCTGA
TTTTATTGGCAATTTACTTACCTTTGAATTATATCCTGAATCCTTCTCAAATCAGATTCGTACTATGCTGAAACAGCAAG
GTCGATGGGCAAGTGAAGTCGAAGCAAATCGAGGCGATAACAGCCATTTTCATATGGAGCTCACGATTGACGCTATCTAC
GATGAATTAGGTGAATTGTCGCATTATGTGGGTGTTTTCTCTGATATATCAAGACGTAAACAGCAGGAAGAAGAACTTCG
TAAACTCACCAACAATGATTTATTGACTGGCCTACCCAACCGGTCAAACCTACAAGTCACATTAGGAAACTTAGTCAATA
AAGAAATTAATCATGCATTAATGGTACTCGATTTAGATAATTTTAAGCGTATCAATGACTCATTAGGTCACCAAGTTGGT
GATAAATTACTAAAACTTGTATCAGTCAGAATTAAATCTTCTGTACCTAAAAACACCAACATCTATCGTTTAGGAGGAGA
TGAGTTTGCCATTGTTCTCGATAAAACGTCGGATATTTTAGCCTCCGCCGCTATTGCGGGACGAATTGTTGATGCTTTTA
ACACTGTATATGAAATAGACAATGAACAACTTGTCTTAGGTGTGAGTGTTGGAATTGTACTGTATCCAGATGATGAGCAG
AATGAGCAAGCCTTACTCAGAAAAGCTGATATTGCCATGTACCATGCAAAATCTGCAGGCGGTAACTGTTACCAATTTTA
CTCTGAATCACTCAATGAACATGCAATTAAACAGCTTGAGACCGAAAATCTTATCCGTGAAGGCTTAAAAGAAGATTTAT
TTGAAGTTTATTATCAACCCAAAGTCGATCTGAAACATGGTCATGTTGCTGGAATGGAAGCTTTAGTCAGATTAAATCAT
CCAACCTTAGGACTTATTCCACCGAATGATTTTATCCCTCTTGCAGAAGAGAATGGTCTGATTGTTGAAATAGGTGAAAT
TGTACTCAGAAAGGCCTGTTTTGCCGCGCAGAAGTGGCGTGAGCAAGGTCTATTTAAGGGCCGAGTCGCCGTCAATTTAT
CGTCACGACAATTTGCCCTACCCGATCTACAACAGCGGATAGAGTCAATTTTACGACTCACCCAATTACCTGCCTCTCAT
TTAGAGCTAGAAATAACTGAAGGTACTGTTATTAAGCAACCAGAAATGGCTATTACTGTTATGCAGCAATTAGCCAAAAT
GGGTGTGAGCCTTGCTTTAGATGACTTTGGAACGGGTTATTCATCGCTTTCTTACTTAAAAAGATTCCCGATTCATACGC
TGAAAATCGATAAAGCATTTGTTGACGATATTGATAAATCCGACCGCGATTTAAAAATGGTCGATTCCATTATTACCATC
GCCCACAATATGGGTCTATCCGTCGTTGGTGAGGGAGTTGAGCAAGCTGCACAGCTAAATATCCTTCGAGCCCTAAATTG
TGAAGAAATACAAGGTTACATCTTCAGTAAGGCCATTAATGAAGCAGAGTTTACCCTTTTACTACAGGAGGACCAGGCTA
AATCCATCGCGATAAACAACACATTGTAA

Upstream 100 bases:

>100_bases
AATTTTTACATTCTCACTTTTGACAAAAGCGGGTATTTCTGGAAAAGTGATGTAACACAATTGTTTCATGGCATCCTCGG
ACAATACTAAGAACAACACT

Downstream 100 bases:

>100_bases
TCATTATATTACTCATCAGGGCAACTTGAAACATTGGCACAACATCTGCATCAACTGTATCAGTGTCAATAATAAATATT
ATCAACTACCCTGAGAGAGA

Product: sensory box protein

Products: NA

Alternate protein names: NA

Number of amino acids: NA

Protein sequence:

>1422_residues
MPKVLLKIFIYSCLCLSTLYPSDSIAIYSKELDSSIVLNSNLFGVPQGLSQGTVTSIVQDNDGYLWIGTFNGLNRFDGSN
FKYFFADGTNSGLPSSFIRSLQIDKNGILYVGTDNGLAVYDKNNDSFIKYGAPLDNTPIWSINTTIETLIVGTNNAIIDI
HGKENHLDLSSKGIGEIKKSIKIGDDYFLKDYSGKLFKINQESSILIKENIIDIEQKNNKSLIISTKDGLFEYDGVLINR
IDNRSFSQLAKNNNTIYGISENYIIDINNKKTIGLISAFNPDKTTVFYANNNFFTLGSVDQGFFIIKKQNNLVKKTSLTT
NSTWHLSKNSQGFLVSSEAEKITLFNNEFKKIRDYNTYTTGYKYALLHKNQLLYGTSNGLFLDNSNSVKKLSNETISALS
SNEDDSILSAGTPDGKILIIKNSEIIKTFNTERKEPIFDIETISENLFYIASQGGLRKYDNGQETLISEQLTYSIQKDRN
YLLFGTSKALMRYDITNEKIDTLFSKNKEIYSIASDTNFITVSSLGEVIIFDKNSKTSYALGTSNGSQYEYNSPSAIKIN
DFILLAGINGVSLVSPQEISDYIKSQKANKTEISKFSVFNMSQEKNGKYLKKPIDVTKEITLKYSDYPFSFDFISPMSDE
SSTNYYYRMLGLSDTWIYSNGTNSATYTNLSPGEYVFQVYTINNLSGEKSSEREVNVIITPPWWSSTQAKIFYFLITMFL
SLFIFKAILRKREIQRQIALSEERLKLSLWGSGDEMWDWDIETGNIFRSNIWGALEFPRDGHRSGNRDEESNIHPMDQER
VREALNKHFYGETDHFEAAYRVKGKDDSWIWILDRAKIVERDDKDNALRMTGTIKNISQFKQKEEQLRLFEKAIENISEG
MFILDSEYRFVEVNEACCRISQRNRSDFIGNLLTFELYPESFSNQIRTMLKQQGRWASEVEANRGDNSHFHMELTIDAIY
DELGELSHYVGVFSDISRRKQQEEELRKLTNNDLLTGLPNRSNLQVTLGNLVNKEINHALMVLDLDNFKRINDSLGHQVG
DKLLKLVSVRIKSSVPKNTNIYRLGGDEFAIVLDKTSDILASAAIAGRIVDAFNTVYEIDNEQLVLGVSVGIVLYPDDEQ
NEQALLRKADIAMYHAKSAGGNCYQFYSESLNEHAIKQLETENLIREGLKEDLFEVYYQPKVDLKHGHVAGMEALVRLNH
PTLGLIPPNDFIPLAEENGLIVEIGEIVLRKACFAAQKWREQGLFKGRVAVNLSSRQFALPDLQQRIESILRLTQLPASH
LELEITEGTVIKQPEMAITVMQQLAKMGVSLALDDFGTGYSSLSYLKRFPIHTLKIDKAFVDDIDKSDRDLKMVDSIITI
AHNMGLSVVGEGVEQAAQLNILRALNCEEIQGYIFSKAINEAEFTLLLQEDQAKSIAINNTL

Sequences:
NA

Specific function: NA

COG id: COG5001

COG function: function code T; Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain

Gene ontology:

Cell location: NA

Metaboloic importance: NA

Operon status: NA

Operon components: NA

Similarity: NA

Homologues:

NA

Paralogues:

NA

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: NA

Theoretical pI: NA

Prosite motif: NA

Important sites: NA

Signals:

NA

Transmembrane regions:

NA

Cys/Met content:

NA

Secondary structure: NA

PDB accession: NA

Resolution: NA

Structure class: NA

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: NA

TargetDB status: NA

Availability: NA

References: NA