Definition Shewanella oneidensis MR-1, complete genome.
Accession NC_004347
Length 4,969,803

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The map label for this gene is Not Available

Identifier: 24374466

GI number:

Start: 3076443

End: 3080468

Strand: Reverse

Name: Not Available

Synonym: SO_2940

Alternate gene names: NA

Gene position: NA

Preceding gene: 24374467

Following gene: 24374465

Centisome position: NA

GC content: NA

Gene sequence:

>4026_bases
ATGGGTATTCCAGCATTAAATCAAAAACTCGTTATCCATGGCGCGAAAGCAGGTGAGAGCGAGCAGCGTACTCCGGTTGA
ATCGCCTGATGATCTGCGCTCAATTGCCAAAGCTAAAATCTTGCTGGCGATCGGAGAAGGTGAATTTGAGGGACAATTAT
CCGGCAAAAATGTATTTTTAGATGGCACTCCATTGCTTGATGCCAATGGCGCTGAAAACTTCCCAGGTGTGATTTGGGAC
TTTCGTCATGGCTCTGTGCATCAAACTTATATTCCTGGTGTCCCCGCAGTTGAAAACGAGGTTGCCTTAGGGATTGAATT
AAAATCAGAGCAGCCTTACACCCGCGCCATCACAAACTCACTGCTCTCTGCTGTGCGGGTTCGCTTTCGCTGGCCAGCGC
TGCAACAGCAATTAGATAACGGTGATGTAAACGGCTATCGCATTGAGTACGCCATTGATCTATCTACTAATGGCGGTAGC
TATCAAACGGTATTAAGCACGGCGGTTGACGGCAAAACTACCCAGCCCTATGAGCGCAGCCACCGTATTGATTTACCTGC
TGGTAACAGCTGGCAAATACGCATTCGCCGCCTCACGCCAAACCAAAACAACAACCGTGTGGCTGACTTAATGCAAATTG
CGGCGATCACCGATGTAATTGACCGCAAACTAAAGTATCCAAATACGGCATTGTTGTACGTGGAATTTGATGCCAGCCAA
TTCCAGAATATCCCCGTGGTATCGTGCGAACCTTTTATGCGAAAAGTAAAGGTGCCAACAAACTACAATCCACTGACCCG
CCAATATACTGGCGTGTGGGATGGTAGCTTTAAAATCGCATGGACAGATAACCCTGCTTGGGTGAGTTACGACATTATCC
TTGATGATCGCTTTGGCACAGGAAAGCGCATCAATGCGTCGCTGGTGGACAAATGGGAGCTTTACCGGATTGCCCAGTAT
TGCGATCAGCTTGTACCAAACGGTAAAGGCGGCATGGAGCCTCGCTATATCTGCAATATCTACATTCAGCAAGCAACAGA
AGCGTGGCAAGTGCTACGCGATTTGGCGTCTATCTACCGTGGCATGACGTACTGGTCAAACGGACAAATCTATTCTGTGG
CCGATATGCCTCGCGATATGGATTTTATCTACACCAATGCCAACGTGATCGACGGCAAATTTAGCTATTCATCCAGTAGC
GAAAAAGTGAAGTACACTCGCGCGTTAATTAGCTGGGATAACCCAGATAACGCCTATGAATCCGATGTTACCTCTGTATC
AGATCAAGCATTACAGCGCCGATATGGCGACAATGTAGTCGAATTATCGGCATTAGGTTGCACTCGCGAATCAGAAGCGC
AGCGCCGCGGTAAGTGGGCACTTTATACCAATAACAATGACCGCGCGGTTAATTTTAAAGTGGGCATGGATGGAAGCATT
CCTTTACCTGGCTTTGTGATTGGAATTGCCGACCAATTGATTGCAGGTAGCCGCATTGGTGGGCGTATCTCGGCGGTTAA
CGGCAAACAAATCACTTTGGACCGCGCGACCACAATCGCAGTTAATGATCGCCTGATTATCAACTTACCCAGCGGCAAGG
CTCAGGCGCGTACCATTGAGGCCGTTAATGGCCGAGTGGTAACGGTAACTACTGAATACAGCGAAACGCCATTACCACAG
CTGTTATGGTCGGTTGAGTCAGACGAGCTAAAGCTACAGCAATTTAGAGTGCTGCGTGTCGCCAAAGCCAATAGTGATAG
CATTGAGTACGAGATCACCGCAGTTGAGCATAACCCAAGCAAGTACCCATACATTGATACAGGCGCACGGCTAGAAGATC
GGCCAATTAGCAAATTGCCTGTGGGTGCGCAGCAAGCACCAGCTACAGTGACAATCAGCCAATCAACATTTACTGAGCAA
ACACTGTCAGTCACGACTATGACAATTCAGTGGGCCACAGCCAAAAATGCAGTGGCTTACGAAGTGGAATGGCGCAAAGA
CTCAGGCGAGTGGGTTAAGCTGCCAAAAACTAGCGGCACCTCGGTTGATATTCGTGGCGTTTACACCGGGCAATATATTG
CTCGAGTTCGCGCGATCAACTCTGTTGATGTGTCGTCAGTGCCTAAGTCCTCTGATCTGACCAATATCACGGGTAAAACT
GGCTTGCCGCCAGCGGTAGCCTCGTTCACCACAACTCCTTTAGTGTTTGGTATTGCGTTAAATTGGTTATTCCCTGCTGG
TGCAGAGGATACCTTGCGCACCGAAATTGAGTACGGCCCCAACAATAACGACAACGGTATGATCAAGTTAGGTGATTTTG
CCTACCCCATAAACAGCCACACCATGACAGGCCTGAGCGCAGGGGTGAGTTTTTGGTTTAGAGCGCGTTTAGTTGACCGC
ACAGGCAACGTGGGACCATGGTCTAACTTTGTAAACGGCCAAAGCTCAACCGACCAAACCAAATATGATGAGTACTTCAG
CGAGCGCATTACATCATCAGCACTTGGGCAAGAACTACTAGATGAAATTGAGCTAATCCCAGTCATTAAAGCCGAAACCG
ATAAAATCCCCGATATTGAAAACGATATTGCAGTTGCACAGAGCAAGATCGATCAAATGCAAGCGGATATCGCTGACATC
GCTGGGGCGCCAGAGTGGGATAGCAATATCGCCTATTTTAGTGGGCAATTAGTAAAATATCAGGGCAAATTGTACTCGGC
TAAGCAAGATGTGCCAGCAGGAACGCTACCAACAAACGCGACTTATTGGGAAAAAATAGGCGAGTACTCAACCATCGGTG
AAGCGCTTGCCGCATTAACTGTGCGAGTGGATACAGTTGAAACATCAATTGAAGAGATTGATGGCAAACTGACTGCTGAA
TCATCACGTATTGATGGAATTTTTGCTCAAGTTAATCCGCCATTGGCTGGCGATACTGGTTGGAATGCCGGATCAACCGT
GGTATTTGCTGGCGTTTGGTCGGAGCAATATGCAAGAGCTGCCGCTGATGAGGCATTGGCAAAAAGTATTGAAACTGTTG
CCGCTACCATTGATAAAAACGCGGCGGCAATCATCACTGAGCAAATGGCGAGAGCCACTGCAGATGAATCATTGGCAAAA
CAAATCATCAGTATTTCCGCAACGGTAAACGGCAATGCTGCATTAATTAAACAAGAGCAAACAGCGCGAGCAGATGCTGA
TAGCGCCTTAGGTCAACGTATCGACACAGTGCAGGCAACAACAGGGGCTAACACTGCCGCAATCCAGCAAGAGCAAACAG
CGCGAGCAAATGCTGATAGCGCCTTAGGTCAACGTATCGACACGGTGCAGGCCACAACAGGGGCTAACACTGCCGCAATC
CAGCAAGAGCAAACAGCGCGAGCAAATGCTGATAGCGCCTTAGGTCAACGTATCGACACAGTGCAGGCCACAACAGGGGC
TAACACTGCAGCAATCCAACAAGAGCAAACCGCCCGTGCTAATGCCGACAGCGCATTAGGCCAACGCATAGATACCGTGC
AGGCCACTGCAGGCGCTAACACTGCCGCTGTGCAGCAAACATCAACGGCGTTAGCTGAGTTAGACGGCAAGCTGCAAGCA
ATGTACTCGATCAAAGTTGGGGTAACTGCAGACGGTAAATATTACGGCGCAGGCATGGCAATCGGTGTGGAGAACACGCC
AGAAGGCATGCAATCGCAAGTACTCTTTACTGCAGATAGATTTGCAATTGTGAATAAAATTACTGGAACATCAACTATCA
CTACGCCTTTTGCTGTCCAAGGTGGTCAGGTATTTATTAACAGCGCTGTTATTGGTGATGGCACAATCACCAACGCTAAG
ATCGGGGATTATATCGAATCAACAAACTATATTGCACAAAATACTGGCTGGAAACTGGATAAGTCCGGTGTATTTGAAAT
TAATGGAAACACTGCAGGCGAGGGACGAATGCAAATATCAAATAATCAAATAGATGTTTATGACAATAGCGGTAATTTAG
TTTGCAGAATGGGTAAATTAACATGA

Upstream 100 bases:

>100_bases
ATTAGTGCAGGCATTTATGCAGAAGACATCGCAACCAGCAAGCGCCCAATTCAATCCGGTGGCGGTAATGGCAACGGCAA
TCAACAGGAGCCTTAACTGA

Downstream 100 bases:

>100_bases
GTTATGCTCTTGCTGTTTATAACGCTGGCAAAGAGGTGCTTTACGATGCGACACCATACAATTTGTTTTGGTGTTTACGT
GTAAAGGACCTTTACCCAGG

Product: prophage LambdaSo, host specificity protein J, putative

Products: NA

Alternate protein names: NA

Number of amino acids: NA

Protein sequence:

>1341_residues
MGIPALNQKLVIHGAKAGESEQRTPVESPDDLRSIAKAKILLAIGEGEFEGQLSGKNVFLDGTPLLDANGAENFPGVIWD
FRHGSVHQTYIPGVPAVENEVALGIELKSEQPYTRAITNSLLSAVRVRFRWPALQQQLDNGDVNGYRIEYAIDLSTNGGS
YQTVLSTAVDGKTTQPYERSHRIDLPAGNSWQIRIRRLTPNQNNNRVADLMQIAAITDVIDRKLKYPNTALLYVEFDASQ
FQNIPVVSCEPFMRKVKVPTNYNPLTRQYTGVWDGSFKIAWTDNPAWVSYDIILDDRFGTGKRINASLVDKWELYRIAQY
CDQLVPNGKGGMEPRYICNIYIQQATEAWQVLRDLASIYRGMTYWSNGQIYSVADMPRDMDFIYTNANVIDGKFSYSSSS
EKVKYTRALISWDNPDNAYESDVTSVSDQALQRRYGDNVVELSALGCTRESEAQRRGKWALYTNNNDRAVNFKVGMDGSI
PLPGFVIGIADQLIAGSRIGGRISAVNGKQITLDRATTIAVNDRLIINLPSGKAQARTIEAVNGRVVTVTTEYSETPLPQ
LLWSVESDELKLQQFRVLRVAKANSDSIEYEITAVEHNPSKYPYIDTGARLEDRPISKLPVGAQQAPATVTISQSTFTEQ
TLSVTTMTIQWATAKNAVAYEVEWRKDSGEWVKLPKTSGTSVDIRGVYTGQYIARVRAINSVDVSSVPKSSDLTNITGKT
GLPPAVASFTTTPLVFGIALNWLFPAGAEDTLRTEIEYGPNNNDNGMIKLGDFAYPINSHTMTGLSAGVSFWFRARLVDR
TGNVGPWSNFVNGQSSTDQTKYDEYFSERITSSALGQELLDEIELIPVIKAETDKIPDIENDIAVAQSKIDQMQADIADI
AGAPEWDSNIAYFSGQLVKYQGKLYSAKQDVPAGTLPTNATYWEKIGEYSTIGEALAALTVRVDTVETSIEEIDGKLTAE
SSRIDGIFAQVNPPLAGDTGWNAGSTVVFAGVWSEQYARAAADEALAKSIETVAATIDKNAAAIITEQMARATADESLAK
QIISISATVNGNAALIKQEQTARADADSALGQRIDTVQATTGANTAAIQQEQTARANADSALGQRIDTVQATTGANTAAI
QQEQTARANADSALGQRIDTVQATTGANTAAIQQEQTARANADSALGQRIDTVQATAGANTAAVQQTSTALAELDGKLQA
MYSIKVGVTADGKYYGAGMAIGVENTPEGMQSQVLFTADRFAIVNKITGTSTITTPFAVQGGQVFINSAVIGDGTITNAK
IGDYIESTNYIAQNTGWKLDKSGVFEINGNTAGEGRMQISNNQIDVYDNSGNLVCRMGKLT

Sequences:
NA

Specific function: NA

COG id: COG4733

COG function: function code S; Phage-related protein, tail component

Gene ontology:

Cell location: NA

Metaboloic importance: NA

Operon status: NA

Operon components: NA

Similarity: NA

Homologues:

NA

Paralogues:

NA

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: NA

Theoretical pI: NA

Prosite motif: NA

Important sites: NA

Signals:

NA

Transmembrane regions:

NA

Cys/Met content:

NA

Secondary structure: NA

PDB accession: NA

Resolution: NA

Structure class: NA

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: NA

TargetDB status: NA

Availability: NA

References: NA