Definition Shewanella oneidensis MR-1, complete genome.
Accession NC_004347
Length 4,969,803

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The map label for this gene is topA

Identifier: 24374246

GI number:

Start: 2822980

End: 2825616

Strand: Reverse

Name: topA

Synonym: SO_2705

Alternate gene names: NA

Gene position: NA

Preceding gene: 24374248

Following gene: 24374203

Centisome position: NA

GC content: NA

Gene sequence:

>2637_bases
ATGGGTAAATCGCTAGTTATTGTCGAATCACCGGCCAAAGCTAAGACCATCAATAAATATCTTGGCAAAGAATTCATCGT
TAAATCGAGCGTGGGTCATATCCGTGATCTACCTACATCTTCTATATCTGACGGCACTGAAAAGGTGAAATCCGCCGCCG
AAGTGAAGAAGATGTCGCCAGAAGAAAAGGCGCGATACAAAAAGGTGAAAGACCATCAAGCGCTGGTATCGCGTATGGGC
GTTAACCCTGAAAAGGGCTGGGCGGCTAAATATCAAATCCTACCGGGTAAAGAGAAAGTCGTTAAAGAGCTGCAAGCCTT
AGCGGATTCTGCTGACCAAATTTATCTCGCAACGGACTTAGACCGTGAAGGGGAAGCAATCGCCTGGCATTTGCAAGAGG
TGATTGGTGGCGATCCTTCACGGTATCAGCGTGTGGTGTTTAACGAGATCACCAAATCAGCGATTCAAGAAGCCTTTAGC
AAGCCTGCATCCCTCGATACCAATATGGTCAATGCTCAGCAAGCACGGCGCTTTTTAGACCGTGTGGTGGGCTTTATGGT
GTCACCTTTGTTGTGGAAAAAGGTCGCCCGCGGTTTATCAGCAGGCCGAGTGCAATCGGTTGCTGTGCGCTTAGTGGTTG
AACGCGAAAGTGAAATCAAAGCCTTTGTGCCAGAAGAGTTTTGGGATGTACATGCCCAGCTTAATACCCCTAGCAGCGAA
GCGCTGCGGATGGAAGTGGTTAAGTATTTAGATTCGGCCTTTGAGCCCACCAATGAGCAGCAAGCGTTAGCCGCAGTGCA
AGCTTTATCTTCGGCAAGCTTTAAAGTGATTGCCCGTGAAGATAAAGCGACTCAAAGTAAACCTTCGGCTCCCTTTATTA
CCTCCACCTTACAGCAAGCAGCCAGTACTCGTTTAGGCTTTGGGGTGAAGAAAACCATGATGATGGCCCAGCGCTTATAC
GAAGCTGGCCATATCACGTATATGCGTACTGACTCGACTAACCTAAGCCAAGAAGCCTTAGACAGCGTACGTGAGATGAT
CGGCAAAGAATACGGCGCCAAGTATTTACCTGCCGAGCCAATCCGCTACGGCTCTAAGGAAGGCGCTCAAGAGGCGCACG
AAGCGATTCGCCCATCGAACGTAAAAGTAGAAGCCGCGGCATTAACCGATATGGAACGCGATGCCCAGCGCCTATACGAA
CTGATTTGGCGTCAATTTGTCTCATGCCAGATGACTCCCGCCCTATACGATGCCACTAAATTGACCGTAAAAGCGGCTGA
CTACGAGCTTAAAGCAACGGGGCGAATTTTGCGTTTTGACGGTTGGACGCGCGTTCAGACCGCAATCAAGAAGAAAAACG
AAGAAGATAATACGCTACCCGCGGTGAATGAAGGCGACGTATTATCCCTCGTTGAACTCGAGCCGAAACAGCATTTTACC
AAGCCGCCAGCGCGATACAGTGAAGCGTCATTGGTTAAAGAATTAGAAAAACGCGGTATTGGTCGCCCATCGACTTACGC
CACTATTATTTCGACTATCCAAGAACGCGGTTATGTCAAAGTTGAAAACCGTCGCTTTTATGCCGAAAAAATGGGCGAAA
TTGTCAGTGAACGCTTAGTAAATAGTTTTGCCGAGTTGATGAGTTATGACTTCACCGCCAGTATGGAGCAGACTCTAGAC
GATGTCGCCAAAGGTGAGCTGGATTGGAAAAAAGTCCTTGATGGTTTCTATGCGGATTTCACTAAACAGTTAGAGAAAGC
TGAACTTGCACCAGAAGAAGGCGGTATGCGCCTTAATCAAATGGTGATGACCAATATTAAATGTCCGACTTGCGGGCGTC
CAATGGGGATCCGTACCGGCACCACAGGGGTTTTCCTTGGTTGTTCTGGCTATGAGCTACCGCCAAAAGAGCGCTGCAAA
ACCACCATGAACTTAACGCCAGGCATTGAAGCGATAAGCGACAGCGAAGATGCTGAAACCGATGCGTTACGTGCGAAGCA
CCGCTGTGGCATATGTGGCACTGCGATGGACAGTTACCTTCTTGACGAGAAACGCAAACTGCATGTTTGTGGTAATAACC
CAGTTTGTGAAGGTTATGAGGTCGAAGAAGGACAATTTAAGATTAAAGGTTATGAAGGGCCGTTAATCGAATGTGACCGT
TGTGGCCATGATATGGAACTGAAAAACGGTCGTTTCGGCAAGTATTTCGGCTGTACTAACGAGGAATGTAAGAATACCCG
TAAGTTACTGAAAAATGGCGAAGCTGCGCCTCCAAAAGAAGATCCCATTTATCTGCCTGAGCTGAAATGCAGTAAATCGG
ATGCGCACTTTGTACTGCGTGATGGTGCCGCGGGGATTTTCTTAGCGGCGAGTACGTTCCCTAAATCGAGGGAAACCCGT
GCGCCATTGGTTGAAGAGTTGGTCAAATACCGAGAATTCTTATGGCCTAAGTATCAGTATCTTGCTGATGCGCCTATCGC
CGATGATGACGGTAATAAGGCGGTGGTGAAGTTTAGCCGTAAGACCAAAGACCAATATGTGGCGACCGAGGTTGACGGTA
AAGCCACTGGATGGTCCGCCCATTATGTCAATGGCAAGTGGGTAAGCGAATCGTCAGCTAAAAAAGCGAAGAAATAA

Upstream 100 bases:

>100_bases
GGTACATATAAAAGAGGGATTAGCTTGAAACTCTCAGTGCAACCCTCTATATATGGAGCCAATTTCCACCTTCTTGAGAT
TTTTTGGCGCAAATCAAACT

Downstream 100 bases:

>100_bases
GCTTGCCCTTAAGGGCATGTTTGCAAGTTATCATTTAGGATGAGCACTATTGCCAATATGCCCGATGAGCCGCGCCGCGA
AAAATAAGCAAGAAGGACTA

Product: DNA topoisomerase I

Products: NA

Alternate protein names: NA

Number of amino acids: NA

Protein sequence:

>878_residues
MGKSLVIVESPAKAKTINKYLGKEFIVKSSVGHIRDLPTSSISDGTEKVKSAAEVKKMSPEEKARYKKVKDHQALVSRMG
VNPEKGWAAKYQILPGKEKVVKELQALADSADQIYLATDLDREGEAIAWHLQEVIGGDPSRYQRVVFNEITKSAIQEAFS
KPASLDTNMVNAQQARRFLDRVVGFMVSPLLWKKVARGLSAGRVQSVAVRLVVERESEIKAFVPEEFWDVHAQLNTPSSE
ALRMEVVKYLDSAFEPTNEQQALAAVQALSSASFKVIAREDKATQSKPSAPFITSTLQQAASTRLGFGVKKTMMMAQRLY
EAGHITYMRTDSTNLSQEALDSVREMIGKEYGAKYLPAEPIRYGSKEGAQEAHEAIRPSNVKVEAAALTDMERDAQRLYE
LIWRQFVSCQMTPALYDATKLTVKAADYELKATGRILRFDGWTRVQTAIKKKNEEDNTLPAVNEGDVLSLVELEPKQHFT
KPPARYSEASLVKELEKRGIGRPSTYATIISTIQERGYVKVENRRFYAEKMGEIVSERLVNSFAELMSYDFTASMEQTLD
DVAKGELDWKKVLDGFYADFTKQLEKAELAPEEGGMRLNQMVMTNIKCPTCGRPMGIRTGTTGVFLGCSGYELPPKERCK
TTMNLTPGIEAISDSEDAETDALRAKHRCGICGTAMDSYLLDEKRKLHVCGNNPVCEGYEVEEGQFKIKGYEGPLIECDR
CGHDMELKNGRFGKYFGCTNEECKNTRKLLKNGEAAPPKEDPIYLPELKCSKSDAHFVLRDGAAGIFLAASTFPKSRETR
APLVEELVKYREFLWPKYQYLADAPIADDDGNKAVVKFSRKTKDQYVATEVDGKATGWSAHYVNGKWVSESSAKKAKK

Sequences:
NA

Specific function: NA

COG id: COG0550

COG function: function code L; Topoisomerase IA

Gene ontology:

Cell location: NA

Metaboloic importance: NA

Operon status: NA

Operon components: NA

Similarity: NA

Homologues:

NA

Paralogues:

NA

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: NA

Theoretical pI: NA

Prosite motif: NA

Important sites: NA

Signals:

NA

Transmembrane regions:

NA

Cys/Met content:

NA

Secondary structure: NA

PDB accession: NA

Resolution: NA

Structure class: NA

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: NA

TargetDB status: NA

Availability: NA

References: NA