Definition Shewanella oneidensis MR-1, complete genome.
Accession NC_004347
Length 4,969,803

Click here to switch to the map view.

The map label for this gene is Not Available

Identifier: 24374042

GI number:

Start: 2623052

End: 2625379

Strand: Reverse

Name: Not Available

Synonym: SO_2498

Alternate gene names: NA

Gene position: NA

Preceding gene: 24374043

Following gene: 24374039

Centisome position: NA

GC content: NA

Gene sequence:

>2328_bases
GTGGCCGATGTTGCTGTTTTGAATATAGATAGTGTAATCTGCGTCAACAAAAATAATGATAAATCGACTCCATTAACACA
GCTCTTTTTGGTGTTAGTTGCAGCAGAATCGTTTTACCCAACACGACGTTTTGTAGGGATCAGAGTGAAGCGACGTCAGC
ATCAGCACTTATTAGAGTCTTTAGTCCATTCTACGGCAAAGCAACAGGGTGATTTCACTAAGACGGCAGAGTTAGCGACA
GAGCTACTCTGTCAGAATTTAGCGGTTTCTTTGGTGTCAATATGGATTTTTTCTGCCGATCAAGGCACGCAATCTCTTGT
TGCTCAATTTGGCTCCATGGCGTTGCAGGACACGTATCGTCCCAGTCTGCTGCATACGGTGCCACGTTATTTAAATGAAC
TCAAAAATTATCGCCATATTGATGCAGGCAATACCCTTATCGACCCGCGATTGACCGAATTAGTCGATAGTTATTTTATT
CCACGCCAAATTTTATCCAGTCTTGATGTCGGCATTCGCATCAATGGTCATCTTGAGGGCGTGCTCTGTATTGAACGGGC
GCAGGTCACTCATCATTGGCACGATAGTGAAATTCATCTTGCTTGCCAAATGGCCGATCAATTAGCCCTCACCCTCGCCA
CAAAACATGCTTACGATAAAGAAGAGCGCCTTAGTCTTTTCCGTTGTGCCATAGAACAATCTCGCCAGATGAGTATGCTG
ATTAACTTGCACACTGAAAAAGTGGAATATGTTAATCAAGCCCATGAGGATATTACTGGGATTGCGCGGGATAAGAGTAT
AGGCACTAATTTACGCGATTTAACTTTTTTCAGGCAGCACAATGCGTTAGCTGAGCAGACCTTAGCAAAAATTTTCAGAG
GGGATCAAGCAAAGGGTGAAGTGCAATTTAGTCGTACAGATGGCAGTCGTTACTGGCTGAAATACATCGTGAGCCAATTT
ATCACCGATAGAGGCAATCATTACGCTTTAGTGTCGGGTGAAGAAAACTCCGATGAGCATAACTACAAAGCGGAGCTGGA
GCGGTTGGCGTGGCGTTGTGGTTTGACAGGGCTTAACAATCGCAGTCACTTTAATCGCGTGCTCGAGCGAACAACCCATG
GATTACTCTTGTTGGTCGATTTGGTCGCCTTTAAGCGTTTTAATGATACTTATGGCCATGAAAATGGCGATAGCCTGTTG
ATTGAGGTCGGTCGGCGCTTAAAACATTTTTCAGAAATTAACAAAGCGACTGAAATCGCCCGCGTTGGTAGTGATGAATT
TGCCGTGTTACTCACCGACGATAATGCGGTTTATGATCTCGACTATTTCAGTACCCGCTTATATCAGCATTTAGCTATGC
CGATATTAATTGGCCGTGAGCAAGTCGAACCTAAGCCCGCGCTGGCCGTGGTTGATATTGCCTCCGTGGCGAATCTATTT
GCGCCACTGACCTGCGCCGATATCGCAGTGCAATACGCAAAGAAGAAAAAAGGTACAGCAATTCAAGTCTTTAACAGTAC
ATTGCTGAGTGCATTTAAGGAAGACGCGCAAATTGAGCGCGATTTACATAGTGCCATTCGTGGTCGCCAGTTTGAACTTT
ATTATCAACCCTTAAGGGACCTTGAGCAGCAAACCTATATCGGCGCCGAAGCCTTGATCCGCTGGCATCATCCCAAGAAA
GGTGTGCTGTATCCCGGCGCATTTATCGATATTGCCGAACAGTCAGGCATGATTAACGCGATAGGCAGTTGGGTGTTAGA
GGCGGCGTGTCGGCAATTGAATATTTGGCAGCATCATAATGCCGATCTTAGCATGCACGTTAACGTGTCAGCGCGGCAGT
TTTTTAGTGGTAATCTGTATGAGCAAGTGTGGCAGCTTTTGACCCGTTATCGTTTAAAGCCCAAAACCTTAATTTTGGAA
ATCACTGAGACGGAACTGATGGGGGATATTCGCCATGCCACCTTATTGTGTCAGGAGTTAGCAGAACTGGGGGTTGGCTT
AGCTATCGACGATTTCGGCACGGGTTACAGCTCGATGCGTTACCTTAAACAGTTCCCCATCAGCAAGTTAAAAATCGATC
GCTCGTTTATCTCTGATTTGACCATTAGCCGCGAAAGTCAGGAAATTGTGTCAGCCATTATTGCGATGGCCAATGCGCTC
AATATTTCCTTGACGGCCGAAGGGGTTGAAACCGCTGAACAGGAGGCATTTTTAGCCAAGAGTTTGTGTCATCAAGCGCA
GGGATTTTTATACAGCCCAGCCCTGCGAGAACCCGAGTTTGCACAGTTTTTACTGACGGCTAAACAACCGAATCTTATCG
CGCACTAA

Upstream 100 bases:

>100_bases
CTGGTATTTGATGTCAGTGTCGAAAAAATGATTTTCCAGTTAGAGAATGGTCTATAGCAAAAAACCTGTGATACAAGTCG
AGGTTAATTTGTAATAAAGT

Downstream 100 bases:

>100_bases
ATCTGATGTTGGCATTCGGTGTAATGATAAAAACAAAGGCAATCAATTGATTGCCTTTGTTTTATGAGTCTATGCTGTCA
TCACGTACAATTAACGTGTT

Product: sensory box protein

Products: NA

Alternate protein names: NA

Number of amino acids: NA

Protein sequence:

>775_residues
MADVAVLNIDSVICVNKNNDKSTPLTQLFLVLVAAESFYPTRRFVGIRVKRRQHQHLLESLVHSTAKQQGDFTKTAELAT
ELLCQNLAVSLVSIWIFSADQGTQSLVAQFGSMALQDTYRPSLLHTVPRYLNELKNYRHIDAGNTLIDPRLTELVDSYFI
PRQILSSLDVGIRINGHLEGVLCIERAQVTHHWHDSEIHLACQMADQLALTLATKHAYDKEERLSLFRCAIEQSRQMSML
INLHTEKVEYVNQAHEDITGIARDKSIGTNLRDLTFFRQHNALAEQTLAKIFRGDQAKGEVQFSRTDGSRYWLKYIVSQF
ITDRGNHYALVSGEENSDEHNYKAELERLAWRCGLTGLNNRSHFNRVLERTTHGLLLLVDLVAFKRFNDTYGHENGDSLL
IEVGRRLKHFSEINKATEIARVGSDEFAVLLTDDNAVYDLDYFSTRLYQHLAMPILIGREQVEPKPALAVVDIASVANLF
APLTCADIAVQYAKKKKGTAIQVFNSTLLSAFKEDAQIERDLHSAIRGRQFELYYQPLRDLEQQTYIGAEALIRWHHPKK
GVLYPGAFIDIAEQSGMINAIGSWVLEAACRQLNIWQHHNADLSMHVNVSARQFFSGNLYEQVWQLLTRYRLKPKTLILE
ITETELMGDIRHATLLCQELAELGVGLAIDDFGTGYSSMRYLKQFPISKLKIDRSFISDLTISRESQEIVSAIIAMANAL
NISLTAEGVETAEQEAFLAKSLCHQAQGFLYSPALREPEFAQFLLTAKQPNLIAH

Sequences:
NA

Specific function: NA

COG id: COG2200

COG function: function code T; FOG: EAL domain

Gene ontology:

Cell location: NA

Metaboloic importance: NA

Operon status: NA

Operon components: NA

Similarity: NA

Homologues:

NA

Paralogues:

NA

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: NA

Theoretical pI: NA

Prosite motif: NA

Important sites: NA

Signals:

NA

Transmembrane regions:

NA

Cys/Met content:

NA

Secondary structure: NA

PDB accession: NA

Resolution: NA

Structure class: NA

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: NA

TargetDB status: NA

Availability: NA

References: NA