| Definition | Shewanella oneidensis MR-1, complete genome. |
|---|---|
| Accession | NC_004347 |
| Length | 4,969,803 |
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The map label for this gene is pspF
Identifier: 24373371
GI number:
Start: 1896559
End: 1897650
Strand: Reverse
Name: pspF
Synonym: SO_1806
Alternate gene names: NA
Gene position: NA
Preceding gene: 24373379
Following gene: 24373370
Centisome position: NA
GC content: NA
Gene sequence:
>1092_bases GTGGATAATAAATTTCAGCAAGACAATCTAATCGGTCAATCAAACGCCCTGCTTGAAGTATTAGAGCATGTCTCACAAAT CGCCCCGTTATCAAAACCAGTACTGATTATTGGTGAACGGGGGACAGGTAAAGAGCTGATTGCCGAACGCTTACATTATC TGTCTAAGCGCTGGGATCAAAATTTTATTAAGCTAAACTGTTCATCTTTAAGTGAAAACTTGCTTGAAAGTGAATTGTTT GGCCACGAATCTGGGGCCTTTACTGGCGCCAAAGGCAAACACGAAGGCCGTTTTGAACGGGCCGATGGTGGAACGCTGTT TCTTGACGAGTTAGCCAATACCTCAGGGTTAATTCAAGAAAAACTGCTGCGTGTCATCGAATACGGTGAATTTGAACGCG TTGGCGGCAGCAAAACGATGCAAGCAGACGTGCGTCTGATCTGTGCTGCCAACGAAGATCTGCCTTCATTAGCCGAAGCG GGCGAATTTAGGGCCGACTTACTCGATCGTTTGGCTTTTGATGTTATCACCCTGCCACCACTGCGTTGTCGCCCTGAAGA TATCATGACCTTAGCGGAGTACTTTGCTGTGGGTATGGCTAGGCAGCTCAAGTTAGAACTCTTTAGCGGCTTTAGTGCAA ATGCCATCGAGCAATTGATGAGTCATGACTGGCCCGGTAATATCCGTGAGCTTAAAAACGTGGTCGAGCGTAGTGTTTAC CGTAATTATGGTGAGAATAGGCCCATTGAGCATATTATTCTCGACCCCTTCGCCTCACCGTACAGACCGACAACCCGAAT TCGCACTCGAGAGCGACAAATCACACCACTACCTCATGTGCCCTTAACGAGCCCGCCTGTCGTTACCACAATAACCGATA CAGAGGTTGTCGGAACCTCGGAGTCCATGACATTCAACTTTAACTTTCCCTTAGACTTTAAAGAGCAAACCGAGCGATAT GAGATGGAGCTTATTCAGCAAGCCTTATCAGCCAGTCAGTACAATCAAAAGAAGACCGCTGAAATCCTTGGCTTAAGCTA CCATCAGCTGCGCGGCATCCTTAAAAAGTACAATTTGCTCGATAAAGCATAA
Upstream 100 bases:
>100_bases TCAAATAGATAAACATTTTATTAACTTTTGCTTTATTTTACACCTCAAGCCACTTATTATGATTTTCACCAAAATTTAGC GTTAAAGACTAAAAAATATC
Downstream 100 bases:
>100_bases GCAGATTGCCCATGGGCGAGATGCACTGCTAAAATAGCGATTCATAGTCGATAAAATAATGATTTTTAAATGAGTGTGCT AATAAGACGCCTTTGCCTAA
Product: psp operon transcriptional activator
Products: NA
Alternate protein names: NA
Number of amino acids: NA
Protein sequence:
>363_residues MDNKFQQDNLIGQSNALLEVLEHVSQIAPLSKPVLIIGERGTGKELIAERLHYLSKRWDQNFIKLNCSSLSENLLESELF GHESGAFTGAKGKHEGRFERADGGTLFLDELANTSGLIQEKLLRVIEYGEFERVGGSKTMQADVRLICAANEDLPSLAEA GEFRADLLDRLAFDVITLPPLRCRPEDIMTLAEYFAVGMARQLKLELFSGFSANAIEQLMSHDWPGNIRELKNVVERSVY RNYGENRPIEHIILDPFASPYRPTTRIRTRERQITPLPHVPLTSPPVVTTITDTEVVGTSESMTFNFNFPLDFKEQTERY EMELIQQALSASQYNQKKTAEILGLSYHQLRGILKKYNLLDKA
Sequences:
NA
Specific function: NA
COG id: COG1221
COG function: function code KT; Transcriptional regulators containing an AAA-type ATPase domain and a DNA-binding domain
Gene ontology:
Cell location: NA
Metaboloic importance: NA
Operon status: NA
Operon components: NA
Similarity: NA
Homologues:
NA
Paralogues:
NA
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: NA
Theoretical pI: NA
Prosite motif: NA
Important sites: NA
Signals:
NA
Transmembrane regions:
NA
Cys/Met content:
NA
Secondary structure: NA
PDB accession: NA
Resolution: NA
Structure class: NA
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: NA
TargetDB status: NA
Availability: NA
References: NA