Definition Shewanella oneidensis MR-1, complete genome.
Accession NC_004347
Length 4,969,803

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Identifier: 24373054

GI number:

Start: 1542160

End: 1543950

Strand: Direct

Name: Not Available

Synonym: SO_1480

Alternate gene names: NA

Gene position: NA

Preceding gene: 24373053

Following gene: 24373055

Centisome position: NA

GC content: NA

Gene sequence:

>1791_bases
TTGAAGTTTTTTAGTGTTTTCATTTTGGCAATCTTGAGCATACTTTGTATGCCCTTGATTGCTTCAACTACAAATTATGA
TGAAACGCTAACTAAGATTGAAACATTACAACATTCTGATTTACCTGCTGCTATAAACCTAATTAAAACAATTGAATCTG
AATTTGGTGCTATGTCTCGCTTACAGCAGGGACGAGTTTTGCTCTTTAAAGGTGCAGCTTCTATTTATTCAGGACAATAT
CAAACTGCTATTGAGTTATTGGGCCAAGCAGAAGCCTTACTCAAAGACTCGGAAATGTTATTTTCTGCATATAGTTATGA
GGCAACAGCCTATATTGCTTTACGTCATTTCAATGATGCATTTATTGCAATGGGAAAGAGTCTTGGTTTAATCGAACGAA
TAGAGGACACAAATCTTAAACGTGCGTCTTACTTACGTTTAGCTAGCTTGTATTCGGCTATGGGGATCTCAGAGGAAGTT
GCTACATATGCAACTAAAGCGCTTGCTCTTGCCTCCGAAAGTGATGTTAAAGATATTTGTGGGGCTAGGCTTTATCTATC
AGTACATCAATTAGAGATAGCGTCGTATGCACAAGCATTTGATGAATTTAAGTCTACTCGTAGTTATTGTGAATCCAGTG
GTTACCCACTAATTGCGAATATTGCATTAAAAGGTATGGGAGAATCGAGTCTTAGATTGAATGAGCCACAGCTTGCTATC
TCTTACTTATTAGATTCTCTAAAGGGGTATGAATCATTTAATTTTGAGCTGGAGATTAATAGCGTACATGAGTTGCTCAG
TGAAGCTTATTTGTTGTTGCAAGATTCTACGAAAGCTGAGTTACATGCTCAATATGTTATGAATCTTGTGGATGATTCTA
GCAATACAGAGCTTAAGCACGGTGCATCAGGTGTACTCGCTAAGATTTATGCTCAAAAACAGCAATTTGAACAGGCCTAT
GAATACTCCAGAAAAGAGCAGCATTATAATCAACTGATTTTTGATGAGTCGAGGATGAAAACCCTTGCTTATCAGGCGGC
TAAGTTTAATGCCGATGAGCAGGCGCGTGAAATCAACTTGCTGAATAAAGAGCGTGAACTTTACATCGCCCAGCAAATGG
TAAAAGAGCGTGAGTACACTAATATGCTCATGTTTATCACCATATTAGTGGGTGGGCTGTTTTTTCTTGCGATTTTGTTA
GTGGTGGGCAATTTGCAAAAACGGCGTTTTATGCGCATGGCCAAAATGGATGCGCTGACGGGCGTGCTTAACCGTGGTGC
AGGGCAAGATCTTGGCGAAAATATGTTTGTGCAAGCCGCTGCCCGAGGGGGGGATTATTGCGTGATTTTATTCGACTTAG
ATCATTTTAAACGGATTAATGATTCCTACGGCCATGGCACGGGTGACTGGGCGCTTAAAAAAGTCGTTGAGGTGTTAAAA
CCTCATATTCGTAATGGCGATGTATTTGCTCGGATTGGCGGCGAAGAGTTTGCCTTATTTTTACCCTATGCCAATGAGGC
TAAGGGGCTGGACGTTGCCGAACAATGCCGCAGCCGAATAGAAGCGATTGATACTCATCTGTCGGGGCATAAATTTACCA
TTACCGCGAGTTTTGGGGTCAGCGGTATGACAAAAGATGATTTAAGCTTAGATCCACTTTTGCACCGTGCTGATATGGCG
CTCTATGCCGCAAAATCGAATGGTCGTAACTGCGTATCTTGTTACCAGGATGCCTTAATGTGCGATAAGCGAGTCACCAA
TCTCACCAGCGAGTTAGCAAGGCAGCCTTAA

Upstream 100 bases:

>100_bases
TAACGCTGTAATGACTGGGGATATGGAAAAGCTCAAAACGTTAAGTGGTGATAGTAGCTATCAATCTTACCTTGTTATTT
CACATGGTAATGGTGATTAA

Downstream 100 bases:

>100_bases
GTGGATTTGTACTCTATCTGTAACTGATTGTTTGGACTAATGTAAAACTACTCGATACTTTTACACTCTCTAGATTTTTC
TGCTTTTTTCTGACGATTTT

Product: GGDEF family protein

Products: NA

Alternate protein names: NA

Number of amino acids: NA

Protein sequence:

>596_residues
MKFFSVFILAILSILCMPLIASTTNYDETLTKIETLQHSDLPAAINLIKTIESEFGAMSRLQQGRVLLFKGAASIYSGQY
QTAIELLGQAEALLKDSEMLFSAYSYEATAYIALRHFNDAFIAMGKSLGLIERIEDTNLKRASYLRLASLYSAMGISEEV
ATYATKALALASESDVKDICGARLYLSVHQLEIASYAQAFDEFKSTRSYCESSGYPLIANIALKGMGESSLRLNEPQLAI
SYLLDSLKGYESFNFELEINSVHELLSEAYLLLQDSTKAELHAQYVMNLVDDSSNTELKHGASGVLAKIYAQKQQFEQAY
EYSRKEQHYNQLIFDESRMKTLAYQAAKFNADEQAREINLLNKERELYIAQQMVKEREYTNMLMFITILVGGLFFLAILL
VVGNLQKRRFMRMAKMDALTGVLNRGAGQDLGENMFVQAAARGGDYCVILFDLDHFKRINDSYGHGTGDWALKKVVEVLK
PHIRNGDVFARIGGEEFALFLPYANEAKGLDVAEQCRSRIEAIDTHLSGHKFTITASFGVSGMTKDDLSLDPLLHRADMA
LYAAKSNGRNCVSCYQDALMCDKRVTNLTSELARQP

Sequences:
NA

Specific function: NA

COG id: COG2199

COG function: function code T; FOG: GGDEF domain

Gene ontology:

Cell location: NA

Metaboloic importance: NA

Operon status: NA

Operon components: NA

Similarity: NA

Homologues:

NA

Paralogues:

NA

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: NA

Theoretical pI: NA

Prosite motif: NA

Important sites: NA

Signals:

NA

Transmembrane regions:

NA

Cys/Met content:

NA

Secondary structure: NA

PDB accession: NA

Resolution: NA

Structure class: NA

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: NA

TargetDB status: NA

Availability: NA

References: NA