| Definition | Shewanella oneidensis MR-1, complete genome. |
|---|---|
| Accession | NC_004347 |
| Length | 4,969,803 |
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Identifier: 24372651
GI number:
Start: 1105523
End: 1108138
Strand: Direct
Name: Not Available
Synonym: SO_1066
Alternate gene names: NA
Gene position: NA
Preceding gene: 24372650
Following gene: 24372652
Centisome position: NA
GC content: NA
Gene sequence:
>2616_bases ATGGAAAATGTTAATAAGTTAACAGCTGTTTCTTTAGCTGTAGCCGCGGCTTTGCCTATGATGGCAAACGCTAATGTAAT GATCACTGAGTATGTTGAAGGTAGCTCAAATAACAAAGCGATTGAATTATATAACAGTGGCAATACAGCAATAGATCTTA CCGGTTATAAACTCGTTCGTTATAAAGATGGCGCCACCGATGCGGCAGATATGCAAGTGTTAGATGGACAAAGCATCGCA CCTAAAGCTACTAAAGTCATTCTCAATTCAAGTGGTGTTATTACCCTGCCTCAAGGCGTTGATAGTTTTTCTGGTACCTT AAGTTTTAACGGTGGCGATGCGGTTGCCTTAGTTAAAGATGGTGCGGTTGTCGATATTATTGGTGACGTGCCAACCCCTG TGGGTTGGGGGCTTGATGTTACCCTTAAGCGCAAGCTTGACTCATTAGTGGCAAATACTGTCTTTAATCCTGCCCAGTGG GAACAATTACCTAAAGATACTTTCACTGGCCTTGGCTCACTGGATACCCCTACTAAGCCTGAAACACCTGCATTTAGCTG CAGCGGTGCAAAAATTGTCCCAATTTACCAAGTTCAAGGTGCGGGAGAGTCTAGTCCTTATGTGCCAGCTGGCGCATTCG AGTCTGAAAGCGAAGTAACCGTTCGCGGTGTCGTCACTGCCCGTGGTGAGAATTTATTTAAAGGTTTTTATCTACAAGAA GTGAAGGGTGATAACTCGCCATACACTTCCGATGGTGTATTTGTGTTTTTAGGTGAAGCGCCACCTCCAGCGATTCAGCC TGGGGTTGAAATTTGTGTTCAGGGTAAGGTGAAGGAATACTTCGGCTTGACTCAAATTGATATCAAAACCGATAAGAAAT TTGAAGCTGGCACTAAGGGTGAAGTCCCAGTCGCCGCGCCTTTCTATGTTGCAGAAGGTGAAACTTTAGCTCAGGCATTA GAGCGTTTTGAAGGGATGAATGTACTATTGGATGCGGGCAGCGATTTGAAGATCAACCGTACCTTTAGCTACGACTACGC AGGTAAGCGCAATAACATGTTGGTGTCATACAAAGCACCCCTGATGAAGCCGACCCAGTTATATCCAGCACTTTCTGCCG AGGCGACGGCATTAGCTAAATCAAACCGCGAGAATCAGCTGTTTATTGAATCCGATTACAAGCCTGCGGATGGCATTATT CCTTACTTCCCCGACTTTAACGCCGAAACAGGTTATATCCGCGTGGGCGATCAACTGACAAATCTGCAAGGTGTGGTTGG CTACAGCTACGGGGCTTACCGTTTAGTGGCAACTAATACTATTACTGCTGGCGATTTTATCCGTGGCGATGATAGAACCG ATGCACCCAGCGTGGCCACCAAAGGCGATATTCGTGTGGCCAGTTTCAACGTGCTTAACTTCTTCAACGATGTTGTGGGT GGCGATACTAACCCATCAGGTGGTAACCGCGGCGCATTGACCGAAGAAGAAATGCTATTACAACGCACAAAAATCGTCAG TGCGATTACCGCCATGAATGCCGATATCGTTGGCTTAATGGAAATTGCTAACAACGGTTTTGGCGAAAAGAGCGCGATTA AGAACTTGGTCGATGCCTTAAACGAGAAGCAAACCACAGAAAATGCTTACAGCTATATTCAAATCGCCGACACAGATAAA TACGACGGCAAGTACTTTGGTAGCGATGCCATTACTGTTGGTATGCTTTATCGTGCTGGTAAAGTAAGCCTTGCGGGTGC GGCTCGTACTATTGAAACTCCTGAGCAACATGCGAGTGTGGGCAGTGTGACTCGCATTAAAGATGGCAAGACTGAGACTA ACCCTGGCAATGATGCTTACCAACGTCACAGCTTAGCGCAAACCTTTAAGATCCATGATCAAAACTTAACCGTTGTTGTT AACCACCTTAAATCAAAGAATTCAGGCTGTTTGGAAGATTGGGTTAACTTCGAAGAGTCAGTCGATCCTGCTGATCTACA GGGTAGATGTAACGAATTCCGTGTGTCAGCGGCGAAAGTGTTAGGTGAAGCGTTAAAAGACGTGAAAGGCGATTTACTGG TTATCGGCGATATGAATGCCTATGGTATGGAAGATCCTCTGCGCGTATTGACTGACTTCGATGCCAGCAAGTCTGACCGC GACATCATGACTGCCTCTTGGACCACCTTAAATGGCAAAGTGTATGAACGCCAAGGTAGCAAGATTGACAAGGGCTATGG TCTTATCAATCTCAATACTAAAGCTCACGGTACTGGCACTTACTCATACAGCTACAATGGTGAGTTAGGCAACCTCGACC ATGCCTTGGCAAACACTAGCCTTGCCAAGCGTTTAGTGGATATCGAAGATTGGCATATCAACTCGGTGGAGTCTAGCCTG TTCGAATTCGGTAAAAAATTCTCAGGTAATCTTGTCAAATCTGAGAATGCGTTTTCTGCTTCAGACCATGACCCTGTGAT TGTGGCGTTAAGCTATCCAGCACCTGTGGTGCCACCAAAACCGCAGCCGACGCCAAAGGATGATGGCGGTGCGCTAGGTT ACTTGGGCTTAGCCTTGTTATCGCTATTGGGTTTACAACGTCGTCGCCGTTATTGA
Upstream 100 bases:
>100_bases GTGAGATCTTGCCCCCTTTTTTTAGCCCTGCAACTCTGGAATAATCTGCCCGCACGTTAATAAAAATTAGCGGCAATATT ATAATGATGGGGTTGTTGAT
Downstream 100 bases:
>100_bases ACTGTTTGCACTCTCACGACTAGGTTGTAAGCTAAACTCAAAACTAAGGGATGGTTTGCCATCCCTTTTTTATGGTGCTG GTTTAGTTGAGCTTTCATAG
Product: extracellular nuclease
Products: NA
Alternate protein names: NA
Number of amino acids: NA
Protein sequence:
>871_residues MENVNKLTAVSLAVAAALPMMANANVMITEYVEGSSNNKAIELYNSGNTAIDLTGYKLVRYKDGATDAADMQVLDGQSIA PKATKVILNSSGVITLPQGVDSFSGTLSFNGGDAVALVKDGAVVDIIGDVPTPVGWGLDVTLKRKLDSLVANTVFNPAQW EQLPKDTFTGLGSLDTPTKPETPAFSCSGAKIVPIYQVQGAGESSPYVPAGAFESESEVTVRGVVTARGENLFKGFYLQE VKGDNSPYTSDGVFVFLGEAPPPAIQPGVEICVQGKVKEYFGLTQIDIKTDKKFEAGTKGEVPVAAPFYVAEGETLAQAL ERFEGMNVLLDAGSDLKINRTFSYDYAGKRNNMLVSYKAPLMKPTQLYPALSAEATALAKSNRENQLFIESDYKPADGII PYFPDFNAETGYIRVGDQLTNLQGVVGYSYGAYRLVATNTITAGDFIRGDDRTDAPSVATKGDIRVASFNVLNFFNDVVG GDTNPSGGNRGALTEEEMLLQRTKIVSAITAMNADIVGLMEIANNGFGEKSAIKNLVDALNEKQTTENAYSYIQIADTDK YDGKYFGSDAITVGMLYRAGKVSLAGAARTIETPEQHASVGSVTRIKDGKTETNPGNDAYQRHSLAQTFKIHDQNLTVVV NHLKSKNSGCLEDWVNFEESVDPADLQGRCNEFRVSAAKVLGEALKDVKGDLLVIGDMNAYGMEDPLRVLTDFDASKSDR DIMTASWTTLNGKVYERQGSKIDKGYGLINLNTKAHGTGTYSYSYNGELGNLDHALANTSLAKRLVDIEDWHINSVESSL FEFGKKFSGNLVKSENAFSASDHDPVIVALSYPAPVVPPKPQPTPKDDGGALGYLGLALLSLLGLQRRRRY
Sequences:
NA
Specific function: NA
COG id: COG2374
COG function: function code R; Predicted extracellular nuclease
Gene ontology:
Cell location: NA
Metaboloic importance: NA
Operon status: NA
Operon components: NA
Similarity: NA
Homologues:
NA
Paralogues:
NA
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: NA
Theoretical pI: NA
Prosite motif: NA
Important sites: NA
Signals:
NA
Transmembrane regions:
NA
Cys/Met content:
NA
Secondary structure: NA
PDB accession: NA
Resolution: NA
Structure class: NA
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: NA
TargetDB status: NA
Availability: NA
References: NA