Definition Shewanella oneidensis MR-1, complete genome.
Accession NC_004347
Length 4,969,803

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Identifier: 24372575

GI number:

Start: 1016861

End: 1021147

Strand: Reverse

Name: Not Available

Synonym: SO_0988

Alternate gene names: NA

Gene position: NA

Preceding gene: 24372577

Following gene: 24372568

Centisome position: NA

GC content: NA

Gene sequence:

>4287_bases
ATGATAGAACTTCGAATCGACAATAAGATAGTCTCGGCCGAACCGAGCGATAACCTATTACACGCAGCCCGTAAGGCGGG
TATTGCTATTCCCAGCCTGTGCGATCCCACTGACGCCTCACGGCAATTGGACACGCAAGCCCATGCCGAAAAGCAGGACT
GTAACCTCTGTCTGGTGCAAATCGAAAATAGCGATGCCAGCCTACGCTGTGTTAAAGCCTGTGAAACCCCAGCCCAAACA
GGCATGAAGGTCATCACCCAATCGGCGTTTTTAACCAAACAACGCCAAGCAGCACTGAACGCTATTTTGAGCGATCACTT
TGCCGACTGTGAGGCGCCCTGCCAACAAGCCTGCCCAGCGGGTGTTGATGTGCAGCGTTATCTGTACCACATTGCCCAAG
GTGACCACACTCAAGCGGTTAAAGTCATTAAAGAAACATTGCCACTGCCACTGTCGATTGGCCGAGTTTGCCCCGCGTTT
TGCGAAACCGAATGCCGCCGCGGCCTCATCGACGACCCGATTGCCATCCGCCAACTTAAGCGCCATGCCGCCGATTTAGA
TTTAGCCGATGACGAGCACGGCAATAGTTATCAACCGCCACGCCTCGCAGACACTGGCAAGAAAATTGCGATTATTGGCT
CTGGCCCAGCGGGCTTAAGCGCGGGTTATTACCTGTCTAACCAAGGGCATAATATTGAGATTTTTGAGGCCATGCCCAAG
GCCGGTGGTTGGCTGCGCTACGGTATTCCCGAATACCGTTTACCCAAAGCGATTCTCGATAAAGAAATTGAGTTGCTGTG
TCGTAATGGGTTAACCATTCATACCCAAATGCGCCTAGGTCATGAGATCCATTTAAACCAGCTGATCACCGATTTTGATG
CAGTGTGCCTTGCCATCGGCGCCCAAAAAGCAGTGCCAATGCACTATAAAGGCTCCGAGCTTGCTGGCTGCTATCTTGGG
GTGGATTTTCTTAAGGATCATTGCCTCGATAAGCAATTGAAGCTTGGTAAAAAAGTGGCGGTAATTGGCGGCGGCAACAC
CGCCATAGATTGTGCTCGCACAGCGGTGCGCGAAGGCTGCGATGTCACCTTAATCTACCGCCGTACCCGCGCCGAAATGC
CCGCTGAAGCCTACGAAGTGCACGAGGCCGAAGTTGAAGGGGTTAAGTTTCACTTCTTAACCAATCCACTTGAAAACCAT
AGTGATGCCGACGGTCGAGTGCAGTCGGTCACCTTTAGCAAAATGACGCTCGGCGAAGCCGATGCCTCGGGCAGACGTGC
GCCAGTGGACACGGGGGAAACCTTTACCGAAGCCTTTGATACAGTGATCGCCGCCGTATCTCAAGCGCCAGATCTGAGCT
TTATGCAAGATCCTAAAGGACAGCTTAGCCATGGCGAACTGGCGCTGAGCCGTTGGAACACACTAATGGGTTGTGAGCAA
ACCATGTCATCGGGCGTGGAAAAGCTGTTTGTGATGGGCGATGCCCGCCGCGGCCCAGCCACCGCCGTTGCCGCCATTGG
TGATGGCCGAAAGGCAGCAAAAGCCATTGATAAAATGCTTCAAATTGGCCTTAGCTGCGATTTGCATGCCCATGAATTTA
ACTCGGTAAAAACCATTCCGGGCTCCCTTAAACAGGCTGAGGTCAAATCAGCAGAAGCAAGTTCACCCCTCTACCCCCAT
ACAAAACGTCAGCCCCGCTTAAAAATGCCCGAACTCACGGCGCTGCAACGACTACTCAATTACAGTGAAGTAGAATTGGG
CTTTCCCGCAGATGCCGCCATGCAAGAAGCGGCACGTTGCCTTGAGTGTGCTTGCCAAGCCAATACTGACTGTAAACTTA
GGGATTACGCCACGGATTACGGTGTTGAGAGCAAAAGCTTAGCCACCGAAAATGCACGGTATTTTAGCGTAGATAAGAGT
TCGCCCTTTATTCAATTCGATGCCAACCGTTGTATTAGCTGCGGCAAATGCGTCGATGTGTGTCAGCAGCAGAGTGGTCA
CTGCGCGATTCAATTCGCGAAAGACTCCTACCAAGTACTGCCGCAGAGCATCAGTCCTGCTGATGAGCGAAGAGCCCCCA
GAGTTGGCTTTAGTGCCAGCATGGCCGATAGCCACTGCGTACAATGTGGTAACTGTGTGCAGGTTTGCCCAACGGGCGCG
CTGGTCGATGCGCGGGATAAACGCCAAGGCGATTGTACAGAGTTAACAACCGCCTCCACCATTTGTACTTACTGCGGTGT
CGGCTGTCGTCTCGATCTTAAAATCGACCCCAGCACCAATCGTATTCGCCATATCGAAGGCAACAAAGACTCGGTCGTTA
ACCAAGGCATGTTATGTGTTAAAGGGCGTTTTGGCTTCGATTTTATTCACAGCGACAAACGCCTAACCACCCCACTAATA
CGTAAAAACGGCAAACTGCAACCTTGTAGTTGGCCGGAAGCTATCGACTATGTAGCAAAACGTTTAACCGAGATAAAACA
AAAAGATGGCAGCAATGCCTTCGCAAGTCTCGCCTCGGCCAAGGCCACCAATGAAGATAACTTTGTACTGCAAAAGTTTG
TCCGTAGCGTCCTTGGCACCAACAACATCGACCATTGCGCCCGCCTGTGTCACTCCTCGACCGTTACGGGCCTGCAGCAG
AGCATTGGTAGCGGCGCCATGACCAATGATATTCTGAGTATAAAGGACTCCGACGTCATTTTTATTCTGGGTTCCGATAC
CACCTGCGCCCATCCGATTATCGCCTCAAAAATCCAGCAGGCAGTCAACCTGTACGGCGCTCGGTTGATCGTGGCCGATC
CGAAACGCGTTGGCATAGCAGAAAAGGCCGAACTCTATGTTGCCCACAGACCGGGCACGGATGTGATGCTGCTCAACGCC
ATTATGGCAGAAATTATTCGCAATAATTGGCAGGATAAAGACTATATTGCCAAGCGGACCGAAGGCATTGAGGCACTGTA
TGCCGAGCTTGCCAAGGAGGATTACTCCCTTGAAAAAGCGGCACTTATCACAGGTGTTAAAGCTGAGAATATCGCCCGTA
TTGCGCGTACCATAGGCACGGCGCAAAAAACGGCGGTGTACTACGCCATGGGGATAACCCAACATACCACGGGGCACGAT
AACGTCACCGCCATATCTAATCTGCAGCTACTTTGCGGCAATATTGGTGTGTCAGGAGCTGGCATCAACCCACTGCGCGG
CCAGAGTAATGTGCAGGGCGCCTGCGATATGGGCGCGCTGCCCAACTATTTTACCGGTTACCAAAAGGTCACGGATATTC
ATGCCAGAATGCGCTTCGAAAGCCATTGGCAAACTCCGTTATCGGGGGAGATTGGCGTCACAGCAACCCATATGATGCAT
GATATTGCCAAGGGCAAAATCAACGCCTTATATGTGATGGGTGAAAACCCAGTGCTGAGCGATCCTGACCAAGCCCATGT
GCTTAACGCCTTAAGCCAGATTGAGTTTTTAGTTGTCCAGGACATCTTTTTAACCGAGACCGCTGAGCTTGCCCATGTGG
TGTTGCCCGCCGCCGCTTTTGTGGAAAAACGCGGCCACTTTACCAACACCGAACGACGAGTACAGCGACTTGAGCAAGCG
CTTGCCTCACCGGGTGAAGCGCTGCCCGATTGGCAAATCGTACAAGCGATTGCCAATGCTATGGGAGCAAACTGGGATTA
TAAAGATGAAGCAGCAATTTGGGCTGAAATTAATGCATTAACGCCTCAGTATCGCGGCATTCTTTGGGAGAGATTAACCG
CTGGTGAGGATGGTCAAATCCCTCAAGGTATTCAATGGCCTTGTCCGGATGAAAAGCATCCGGGAACACCGATTATGCAC
CAAGGTCAATTCACCCGCGGTTTAGGTTTATTTACGCCGGTCAGCTATCGCCTTCCCGCTGAAATGCCCTGCAACGAGTA
TCCACTTACGCTCTCGACAGGTCGTCTATTGGAGCAATTCCATACGGGCACCTTAACGCGCAAAACGCCCGGGCTGGACT
TACTTGGTGCACCTAAAGTGATGATTTCTGTCTACGATGCCGAACAACTCGGGATTAATAACGGCGATAAAATTCGCCTA
ACCACCCGCCGTGGCGAGATTGAAATTGATGCCTTTGTGACAAAACGCGCTCAGGCAGGCGTACTGTTCTTACCCTTCCA
TTTTGTCGAAGCCGCAGCGAACAAACTCACCATCAATGCATTAGATCCCGTGGCTTATATCCCCGAGTATAAAGTGTGTG
CGGTAAGAGTTGAAAAGGTGACAAAGCAGATGTGTGAGCCCACCTAA

Upstream 100 bases:

>100_bases
CATAAACATCTTCTAAAGCGCTCTAGTTATACTCAAATCCACCTAAGTCTGCCGCTTTACGCTATGCAGCAAGCACCCTA
TAAATATAAAAGGCCATGGG

Downstream 100 bases:

>100_bases
GCTGACATCTTCTGGGTGAACACCCAATAGACAGATATAAAAAAACGGGAGATGTTATCTCCCGTTTTATTTTCTAACTC
AATAATAAATGATGATTAAA

Product: formate dehydrogenase, alpha subunit

Products: NA

Alternate protein names: NA

Number of amino acids: NA

Protein sequence:

>1428_residues
MIELRIDNKIVSAEPSDNLLHAARKAGIAIPSLCDPTDASRQLDTQAHAEKQDCNLCLVQIENSDASLRCVKACETPAQT
GMKVITQSAFLTKQRQAALNAILSDHFADCEAPCQQACPAGVDVQRYLYHIAQGDHTQAVKVIKETLPLPLSIGRVCPAF
CETECRRGLIDDPIAIRQLKRHAADLDLADDEHGNSYQPPRLADTGKKIAIIGSGPAGLSAGYYLSNQGHNIEIFEAMPK
AGGWLRYGIPEYRLPKAILDKEIELLCRNGLTIHTQMRLGHEIHLNQLITDFDAVCLAIGAQKAVPMHYKGSELAGCYLG
VDFLKDHCLDKQLKLGKKVAVIGGGNTAIDCARTAVREGCDVTLIYRRTRAEMPAEAYEVHEAEVEGVKFHFLTNPLENH
SDADGRVQSVTFSKMTLGEADASGRRAPVDTGETFTEAFDTVIAAVSQAPDLSFMQDPKGQLSHGELALSRWNTLMGCEQ
TMSSGVEKLFVMGDARRGPATAVAAIGDGRKAAKAIDKMLQIGLSCDLHAHEFNSVKTIPGSLKQAEVKSAEASSPLYPH
TKRQPRLKMPELTALQRLLNYSEVELGFPADAAMQEAARCLECACQANTDCKLRDYATDYGVESKSLATENARYFSVDKS
SPFIQFDANRCISCGKCVDVCQQQSGHCAIQFAKDSYQVLPQSISPADERRAPRVGFSASMADSHCVQCGNCVQVCPTGA
LVDARDKRQGDCTELTTASTICTYCGVGCRLDLKIDPSTNRIRHIEGNKDSVVNQGMLCVKGRFGFDFIHSDKRLTTPLI
RKNGKLQPCSWPEAIDYVAKRLTEIKQKDGSNAFASLASAKATNEDNFVLQKFVRSVLGTNNIDHCARLCHSSTVTGLQQ
SIGSGAMTNDILSIKDSDVIFILGSDTTCAHPIIASKIQQAVNLYGARLIVADPKRVGIAEKAELYVAHRPGTDVMLLNA
IMAEIIRNNWQDKDYIAKRTEGIEALYAELAKEDYSLEKAALITGVKAENIARIARTIGTAQKTAVYYAMGITQHTTGHD
NVTAISNLQLLCGNIGVSGAGINPLRGQSNVQGACDMGALPNYFTGYQKVTDIHARMRFESHWQTPLSGEIGVTATHMMH
DIAKGKINALYVMGENPVLSDPDQAHVLNALSQIEFLVVQDIFLTETAELAHVVLPAAAFVEKRGHFTNTERRVQRLEQA
LASPGEALPDWQIVQAIANAMGANWDYKDEAAIWAEINALTPQYRGILWERLTAGEDGQIPQGIQWPCPDEKHPGTPIMH
QGQFTRGLGLFTPVSYRLPAEMPCNEYPLTLSTGRLLEQFHTGTLTRKTPGLDLLGAPKVMISVYDAEQLGINNGDKIRL
TTRRGEIEIDAFVTKRAQAGVLFLPFHFVEAAANKLTINALDPVAYIPEYKVCAVRVEKVTKQMCEPT

Sequences:
NA

Specific function: NA

COG id: COG0243

COG function: function code C; Anaerobic dehydrogenases, typically selenocysteine-containing

Gene ontology:

Cell location: NA

Metaboloic importance: NA

Operon status: NA

Operon components: NA

Similarity: NA

Homologues:

NA

Paralogues:

NA

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: NA

Theoretical pI: NA

Prosite motif: NA

Important sites: NA

Signals:

NA

Transmembrane regions:

NA

Cys/Met content:

NA

Secondary structure: NA

PDB accession: NA

Resolution: NA

Structure class: NA

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: NA

TargetDB status: NA

Availability: NA

References: NA