Definition Shewanella oneidensis MR-1, complete genome.
Accession NC_004347
Length 4,969,803

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Identifier: 24372139

GI number:

Start: 567052

End: 568779

Strand: Direct

Name: Not Available

Synonym: SO_0545

Alternate gene names: NA

Gene position: NA

Preceding gene: 28275200

Following gene: 24372140

Centisome position: NA

GC content: NA

Gene sequence:

>1728_bases
GTGTATATGGATTTACTACTGATCGATGATGATGAAGTCGATAGAACAGCTATTATTCGGGCGCTGCGACAATCCAAGCT
CGCCTTTAATGTGGTTGAGGCGAATTGTGCTTTTGATGGCTTAAATCTTGCCTTACAGCGTCATTTTGATGGGATTTTAC
TCGACTACCTATTGCCAGATGCCAACGGCTTAGAGGTGCTGATCAAACTTAATTCGATGACTCAGGAACAAACGGTTGTG
GTGATGCTGAGCCGTTATGAAGATGAAAAACTTGCACAGCGTTGTATCGAATTAGGCGCACAGGATTTTTTACTTAAGGA
TGAAGTTAACTCAAGAATTCTCAGTCGTTCAATTCGTTACGCTAAACAGCGAGCTTCTATGGCGCTTGCCTTGAGGAATA
GTCATGAAAAACTGAAAGAGCTAGCTGAACACGATTCTCTCACCAAATTAATGAATCGATATGGTTTTGAGCTGTGCTTA
AATCGGGCAATCGCCAGGGTAAAACGCAGTAATGATTTGTTAGCAGTGATCTTGCTCGATCTGGATGATTTTAAAGCAAT
TAATGATACTCTTGGTCACCAGACTGGTGATATTTTGTTAGTGAAGGTCGCATCGAGATTGAGCACAGTGTTGCGGGATG
GGGATGTGATTGCTCGTTTAGGCGGGGATGAATTTGTGGTGTTAGTGACTGACAATGACTACAAATATTTCCCCATGATA
GTGGCTAACCGTCTACTTAAAGCTTTTGAAGAAGTGTTTTGTCTTGGCGATAACGATGTGATGATCGGCGCTAGCATCGG
AGTGGCTTTTTATAATGAAGCGGCCTCAGATAGCTCCGAGTTAATGAAATGTGCCGATATTGCGATGTATCGTGCTAAAA
AAATGGGACGTAACCAGATCCAGTTTTACTCCGAGGCGCTAGATAAAGAGGTGCGCTATCGCAATCATATTGAATCTAGT
TTGAGAATAGCCTTAAGGCTGAATCAGTTTAAGGTTTATTATCAAGTACAAGTTGATGCTCAAACACATCAAATGGTGGG
GATGGAGGCACTGATCCGTTGGTTGCATCCAGAGGATGGCTTGATTTCACCAGACCAATTTCTGCCCATTGCTGAAGAAA
TAGGGCTGATGGAAGAGATTGGTGATTGGGTCTTGTTCGAAACCTGTCGTCAGGCCCAGTATTGGCTTAATCAATTAGCG
CCAACTGGACATAGTTTCACCATTGCGGTGAATTTATCAGCATCTCAAATTGGTCATGTCGACTTATATGAGAAAATTGC
CCATGTTCTAAAAGTGACAGGGCTAACACCAGGCGCGCTAGAGTTAGAAATTACCGAAAACTGTTTAATTGAAGAGCCCC
ACGAGCATGCGAAGATCCTCGATAAAATAGCCCAACTTGGAGTGCGATTCGCCTTGGATGATTTTGGTACGGGATTTTCA
TCTCTTGAACACATTAAATTGTTTCCTATCAGTGTGCTAAAAATCGATAAAAGCTTTATCGCTTCCTACGATAAGGATGA
AAAGGACACTCGTTTGCTCAGTGCACTGCTGAACTTTGCCTATGGTTTTAACGTTACCTCCGTTGCCGAAGGGATTGAAA
CTCTTGAACAAGCAGAGTTTTGCACGGTAAGACATTGTAATCTATTGCAGGGCTACCTCTTTTCTCGCCCCTTAGAGGCA
AGTGAGTTTGAGGCAAAATACATCACGCCGTTACTTTCTAAATTGTGA

Upstream 100 bases:

>100_bases
TGGCTATATGGTGAAAACGGATATCAAATATGGTTTCCATAATATTTTTAATATGTTGGAAGGCTACTGGCGCATCGTTG
AATTGCCAAGTGTATAGGGT

Downstream 100 bases:

>100_bases
AGGTTATCTTACGTTTGGCTTAGGCTTGGGTTTTCGTCTGGTGAGGAATATTTTCTTGCTTTACACTGAGCAATAGACAA
CTATCTGCGCCCCTTTCTGA

Product: response regulator

Products: NA

Alternate protein names: NA

Number of amino acids: NA

Protein sequence:

>575_residues
MYMDLLLIDDDEVDRTAIIRALRQSKLAFNVVEANCAFDGLNLALQRHFDGILLDYLLPDANGLEVLIKLNSMTQEQTVV
VMLSRYEDEKLAQRCIELGAQDFLLKDEVNSRILSRSIRYAKQRASMALALRNSHEKLKELAEHDSLTKLMNRYGFELCL
NRAIARVKRSNDLLAVILLDLDDFKAINDTLGHQTGDILLVKVASRLSTVLRDGDVIARLGGDEFVVLVTDNDYKYFPMI
VANRLLKAFEEVFCLGDNDVMIGASIGVAFYNEAASDSSELMKCADIAMYRAKKMGRNQIQFYSEALDKEVRYRNHIESS
LRIALRLNQFKVYYQVQVDAQTHQMVGMEALIRWLHPEDGLISPDQFLPIAEEIGLMEEIGDWVLFETCRQAQYWLNQLA
PTGHSFTIAVNLSASQIGHVDLYEKIAHVLKVTGLTPGALELEITENCLIEEPHEHAKILDKIAQLGVRFALDDFGTGFS
SLEHIKLFPISVLKIDKSFIASYDKDEKDTRLLSALLNFAYGFNVTSVAEGIETLEQAEFCTVRHCNLLQGYLFSRPLEA
SEFEAKYITPLLSKL

Sequences:
NA

Specific function: NA

COG id: COG5001

COG function: function code T; Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain

Gene ontology:

Cell location: NA

Metaboloic importance: NA

Operon status: NA

Operon components: NA

Similarity: NA

Homologues:

NA

Paralogues:

NA

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: NA

Theoretical pI: NA

Prosite motif: NA

Important sites: NA

Signals:

NA

Transmembrane regions:

NA

Cys/Met content:

NA

Secondary structure: NA

PDB accession: NA

Resolution: NA

Structure class: NA

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: NA

TargetDB status: NA

Availability: NA

References: NA