Definition Shewanella oneidensis MR-1, complete genome.
Accession NC_004347
Length 4,969,803

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The map label for this gene is Not Available

Identifier: 24372135

GI number:

Start: 560624

End: 562060

Strand: Direct

Name: Not Available

Synonym: SO_0541

Alternate gene names: NA

Gene position: NA

Preceding gene: 24372134

Following gene: 24372138

Centisome position: NA

GC content: NA

Gene sequence:

>1437_bases
ATGACATTGCAGTTTTTAGGTGCAGCTCGGGAAGTCACTGGTTCTTGTCATTTAGTCACAGTGGCGGGGAAGCACCTGTT
GCTCGATTGCGGCTTAATCCAAGGTGGTAAGGCGGATGAATTACGTAATCACGAACCTTTCGTCTTTGATCCGCAAACCA
TTGTCGCCGTTGTGCTAAGCCATGCCCATATCGACCATTCAGGGCGTTTACCGCTCTTGGTCAAAGCGGGTTTTGATGGA
CCCATCTATACCCATAAAGCCACTGCAGAGCTGTGTGCCATCATGCTGAAAGATGCGGCCATGCTGCAGGTGCGCGATAC
CGAAAGGACCAATAAAAAGCGCGCTAAACATGATCTTGCCCCCCTAGAGCCACTTTTCACCGTTGAAGATGCCGAACAGG
CCATCAGCCAGTTTGTTTCGCTGGAATATGGCCAAGTAACTCGGGTTATCCCCCATGTGGATATTTGCCTCTCAGATGCG
GGGCATATTTTAGGCTCTGCCTTAGTCGAGCTGTGGTTAGGCGAAGGTAAGTCCCAGAAGAAAATCGTTTTCAGTGGTGA
TCTTGGCCGGGCGGGCATGCCCATTTTGCAAAATCCTACCTTAGTGGATACGGCGGATTTAGTGTTAATGGAAAGCACCT
ACGGCAACCGTTTTCACCGCAGTTGGACCGATACCCTTGCCGAGTTAAAGGACATTTTTGCTAAGACAGTCAACGAGAGC
CAAGGTAATATCTTGCTACCGGCTTTCTCGGTTGGGCGGGCACAGGAACTTTTATATCTATTTCATTTATATGCTAAAGA
ATGGGATCTTGGTCGCTGGAAAATCTGTCTAGATAGCCCTATGGCGATTGAGGCAACCCGTGTCTATGTTAATAATTATC
CGTTAATGGATGAGGACTTTAAGCGCTTTACCCGCCAGCATCCGGGGCAACACCCATTACTGTCGAATGTGGAGTTTATT
CAAACCACGGAAGAATCTATCGCCCTCAACGAGGTGCATAAAGGGTTGATTATTATTGCTGGTAGCGGCATGTGTAACGG
CGGTCGTATTCGCAGCCACCTCGAACATAATCTGTGGCGATCTGAATGTGATGTGATTATCTGTGGTTTCCAAGCACTCG
GCACGCCCGGCCGCGCCTTAGTTGATGGTGCCAAGGAGCTTACTATCCATGGCAATAGCGTCAACGTTGCTGCTAAGTTG
CATACTGTGGGGGGCTTATCTGCCCATGCGGACCAGGCAGAGTTGTTACGTTGGTATCGCCATTTTGAAGAGCAGCCCCC
TTTGGTGCTGGTTCATGGGGAGCCCGAAGCCCAGCAGGGATTAGTGGCGGTCATGAATCAAGATCCTAAAACTAAACCTA
AAGCGCTCGCCATCGCCACCCGTGGCGACATGTTGGATTTAACCGCTTTACCCAAACTGGTATGGGTGACGGCTTAA

Upstream 100 bases:

>100_bases
TGAGTTTTACTCATTGTTTACTAATTATTCCTTTTTCTTTTAGGAATAAGGGCATAGTCTATCTTTAGATGAAAAAATAG
GCTGGAGGCAGATTATGCAA

Downstream 100 bases:

>100_bases
GCGCTCGCCCACAGCCTAAAGGGGCTGTGGGCAAATTGCAGGGTTAGTCAGAGTTATTATCAAATTCAGTATCGTCTAGT
AACTCGAGACTCGGGTCGAT

Product: metallo-beta-lactamase family protein

Products: NA

Alternate protein names: NA

Number of amino acids: NA

Protein sequence:

>478_residues
MTLQFLGAAREVTGSCHLVTVAGKHLLLDCGLIQGGKADELRNHEPFVFDPQTIVAVVLSHAHIDHSGRLPLLVKAGFDG
PIYTHKATAELCAIMLKDAAMLQVRDTERTNKKRAKHDLAPLEPLFTVEDAEQAISQFVSLEYGQVTRVIPHVDICLSDA
GHILGSALVELWLGEGKSQKKIVFSGDLGRAGMPILQNPTLVDTADLVLMESTYGNRFHRSWTDTLAELKDIFAKTVNES
QGNILLPAFSVGRAQELLYLFHLYAKEWDLGRWKICLDSPMAIEATRVYVNNYPLMDEDFKRFTRQHPGQHPLLSNVEFI
QTTEESIALNEVHKGLIIIAGSGMCNGGRIRSHLEHNLWRSECDVIICGFQALGTPGRALVDGAKELTIHGNSVNVAAKL
HTVGGLSAHADQAELLRWYRHFEEQPPLVLVHGEPEAQQGLVAVMNQDPKTKPKALAIATRGDMLDLTALPKLVWVTA

Sequences:
NA

Specific function: NA

COG id: COG1236

COG function: function code J; Predicted exonuclease of the beta-lactamase fold involved in RNA processing

Gene ontology:

Cell location: NA

Metaboloic importance: NA

Operon status: NA

Operon components: NA

Similarity: NA

Homologues:

NA

Paralogues:

NA

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: NA

Theoretical pI: NA

Prosite motif: NA

Important sites: NA

Signals:

NA

Transmembrane regions:

NA

Cys/Met content:

NA

Secondary structure: NA

PDB accession: NA

Resolution: NA

Structure class: NA

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: NA

TargetDB status: NA

Availability: NA

References: NA