Definition Shewanella oneidensis MR-1, complete genome.
Accession NC_004347
Length 4,969,803

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The map label for this gene is gspD

Identifier: 24371766

GI number:

Start: 172301

End: 174415

Strand: Direct

Name: gspD

Synonym: SO_0166

Alternate gene names: NA

Gene position: NA

Preceding gene: 24371765

Following gene: 24371767

Centisome position: NA

GC content: NA

Gene sequence:

>2115_bases
ATGAATAACAAACGGATTCGACGCAAACTGATTGCTGGAGTTGTGGCGGGCGCCACCATGCTGACCTCGCAATTTGTTTG
GTCTGAACAATATGCGGCCAACTTTAAGGGCACAGATATTCAAGAATTTATCAATATTGTTGGTAAAAATCTGAATAAAA
CCATTATCGTTGACCCAACAATTCGCGGCAAGATCAACGTTCGCAGCTATGATCTACTCAATGATGAGCAATACTATCAA
TTTTTCCTCAACGTGCTGCAAGTGTACGGTTATGCCATCGTCGAGATGGAAAATAACGTTATCAAAGTCATCAAAGATAA
AGATGCGAAAACGGCAGCGATTCGTGTTGCCAATGACAATGACCCAGGTCTGGGTGATGAAATGGTTACCCGTATCGTGG
CGCTGTATAACACAGAGGCTAAGCAATTAGCGCCGTTATTACGTCAGTTAAACGATAACGCTGGTGGTGGAAACGTTGTT
AACTACGACCCTTCAAACGTGCTGATGCTGTCTGGTCGCGCTGCGGTCGTAAACAAGCTAGTGGAAATCATTCGCCGAGT
CGATAAACAGGGTGATACCTCTGTACAAGTAGTGCCGCTCGAATATGCCTCTGCCGGTGAAATGGTACGAATTATCGATA
CTCTGTACCGCGCAACCGCTAACCAATCGCAGCTTCCAGGTCAAGCGCCCAAAGTGGTGGCCGATGAGCGGATTAACGCT
GTCGTCGTGAGTGGTGACGAAAAGAGCCGCCAACGTGTGGTTGAGTTGATCCACCGTCTCGATGCTGAACAAGCCAGCAC
GGGTAACACTAAGGTACGTTATTTACGTTATGCCAAGGCCGAAGACTTAGTTGAAGTGTTAACTGGCTTTGCGCAGAAGC
TCGAAAGCGAAAAAGATCCGAGCGCTCAAGCTGCAGGTGGTGGTAAACGTCGTAATGAAATTAATATTATGGCCCACACC
GACACTAACGCATTAGTGATCAGTGCTGAGCCGGACCAAATGCGCACCATTGAGAGCGTCATCAACCAACTCGATATTCG
TCGTGCTCAGGTACTCGTAGAAGCCATTATCGTGGAAGTCGCCGAAGGCGATAACGTGGGCTTTGGTGTGCAATGGGCCG
CCAAAGCTGGTGGTGGTACTCAGTTTAATAACTTAGGCCCAACTATTGGTGAAATTGGCGCGGGTATTTGGCAGGCGCAG
GATAAAGAAGGTACTTACATTACGAACCCGAGCACGGGTGAGGTGATTGGCCAAAACCCCAAAACCAAGGGTGATGTGAC
CTTATTGGCGCAGGCCTTAGGTAAAGTGAATGGTATGGCATGGGGCGTTGCCATGGGTGACTTTGGTGCCTTAGTACAAG
CGGTCTCCGCCGATACCAACTCAAACGTACTGGCAACGCCTTCGATTACCACCTTAGATAACCAAGAAGCTTCCTTCATC
GTCGGTGACGAAGTGCCCATTCTGACGGGTTCTACCGCCAGTTCAAACAACAGTAACCCATTCCAAACCGTTGAGCGTAA
AGAGGTTGGGGTGAAGTTAAAAGTGGTGCCACAGATTAACGAAGGCAACGCGGTTAAACTCGCCATTGAGCAGGAAGTCT
CCGGCGTAAACGGTAACACTGGGGTGGATATTTCCTTCGCGACACGCCGGTTAACTACCACTGTTATGGCCGATTCAGGC
CAAATCGTGGTACTCGGTGGTTTGATTAACGAAGAAGTCCAAGAAAGTATCCAGAAAGTGCCATTCCTTGGTGATATTCC
GATACTCGGACACTTATTCAAATCCTCTTCTAGCAAGAAGACCAAGAAAAACCTGATGATCTTCATCAAGCCCACCATCA
TCCGTGATGGTGTGACGATGGAAGGTATCGCGGGTCGCAAATATAACTATTTCAGAGCGTTGCAGCTTGAACAGCAAGAG
CGTGGTGTCAATTTAATGCCTGATACTAAAGTGCCGGTATTAGATGAGTGGAACCAGTCTGAGTACTTGCCACCTGAAGT
GAACGATATTTTAGAGCGTTACAAAGAAGGCAAAGGGTTAGAGACTCAGATGCGTAAAACTGACCCGACCCTCAAGTCGT
TGGATGAAAACAAAAACAAAGATAAAACACAATGA

Upstream 100 bases:

>100_bases
TGAATTAACTGAAGTTTCCATTATGGTTGAGCGGGAAGGACAATTGGTTGAAATCATGTTTAGTTTGCCGCAATAACACG
CGTTAGGGGAAAGAAAAATA

Downstream 100 bases:

>100_bases
GTGAAATACAAGTATCCCAAGTCGAGGATTTAAGCTTAGTTTCCAATGAACTAGGTCTTGAAGCCGAAGGTGATGAGGTA
TTTCGCTCCAGCAGCAAAGA

Product: general secretion pathway protein D

Products: NA

Alternate protein names: NA

Number of amino acids: NA

Protein sequence:

>704_residues
MNNKRIRRKLIAGVVAGATMLTSQFVWSEQYAANFKGTDIQEFINIVGKNLNKTIIVDPTIRGKINVRSYDLLNDEQYYQ
FFLNVLQVYGYAIVEMENNVIKVIKDKDAKTAAIRVANDNDPGLGDEMVTRIVALYNTEAKQLAPLLRQLNDNAGGGNVV
NYDPSNVLMLSGRAAVVNKLVEIIRRVDKQGDTSVQVVPLEYASAGEMVRIIDTLYRATANQSQLPGQAPKVVADERINA
VVVSGDEKSRQRVVELIHRLDAEQASTGNTKVRYLRYAKAEDLVEVLTGFAQKLESEKDPSAQAAGGGKRRNEINIMAHT
DTNALVISAEPDQMRTIESVINQLDIRRAQVLVEAIIVEVAEGDNVGFGVQWAAKAGGGTQFNNLGPTIGEIGAGIWQAQ
DKEGTYITNPSTGEVIGQNPKTKGDVTLLAQALGKVNGMAWGVAMGDFGALVQAVSADTNSNVLATPSITTLDNQEASFI
VGDEVPILTGSTASSNNSNPFQTVERKEVGVKLKVVPQINEGNAVKLAIEQEVSGVNGNTGVDISFATRRLTTTVMADSG
QIVVLGGLINEEVQESIQKVPFLGDIPILGHLFKSSSSKKTKKNLMIFIKPTIIRDGVTMEGIAGRKYNYFRALQLEQQE
RGVNLMPDTKVPVLDEWNQSEYLPPEVNDILERYKEGKGLETQMRKTDPTLKSLDENKNKDKTQ

Sequences:
NA

Specific function: NA

COG id: COG1450

COG function: function code NU; Type II secretory pathway, component PulD

Gene ontology:

Cell location: NA

Metaboloic importance: NA

Operon status: NA

Operon components: NA

Similarity: NA

Homologues:

NA

Paralogues:

NA

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: NA

Theoretical pI: NA

Prosite motif: NA

Important sites: NA

Signals:

NA

Transmembrane regions:

NA

Cys/Met content:

NA

Secondary structure: NA

PDB accession: NA

Resolution: NA

Structure class: NA

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: NA

TargetDB status: NA

Availability: NA

References: NA