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The map label for this gene is rlpA [C]

Identifier: 23502983

GI number: 23502983

Start: 2059697

End: 2060053

Strand: Reverse

Name: rlpA [C]

Synonym: BR2135

Alternate gene names: 23502983

Gene position: 2060053-2059697 (Counterclockwise)

Preceding gene: 23502992

Following gene: 23502981

Centisome position: 97.74

GC content: 61.06

Gene sequence:

>357_bases
ATGAACTTCAAGACCCGTATGGCTATGCTTGCCGTTGCGGCAACCGGCCTTCTCGCCGCCACCGCAATCGAGGCTTCAGC
AGAGCAATGCGGCGGTGCCTCCTGGTACGCCCTTACTTCCCGCACGGCTTCAGGCGAACGCATGAACCCGGCCGGACTGA
CCGCAGCCCACCGCACCCTGCCGCTTGGCAGCAAGGTCAAGGTCACCAATCAGAAAAACGGCAAATCGCTCGTCGTGCGC
ATCAATGATCGCGGTCCGTTCATCAAGGGGCGCGTACTCGATCTTTCCAAGGGCGCTGCAAGCCGTCTGGGCTTCATCGG
CGCCGGGCACACCAAAGTCTGCTTCAAGCCACTTTAG

Upstream 100 bases:

>100_bases
TCATTCAAACCACGCCAGTGCCACATTTAGATTCCAGTTCGCATGGGCCTTGCTCAGCAATGACTGCGCAGACACCCCGT
AAACAACTAGTGGATCTGGT

Downstream 100 bases:

>100_bases
GCAAAGCGGCGTTCTGGCGGCCCCCGCCCTATTTCTTTATTTTCACGCCTTATCCGACGCATCGAAGCGGGATCAGAAAT
CAGCCCAGTAGACTGATTTC

Product: rare lipoprotein A family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 118; Mature: 118

Protein sequence:

>118_residues
MNFKTRMAMLAVAATGLLAATAIEASAEQCGGASWYALTSRTASGERMNPAGLTAAHRTLPLGSKVKVTNQKNGKSLVVR
INDRGPFIKGRVLDLSKGAASRLGFIGAGHTKVCFKPL

Sequences:

>Translated_118_residues
MNFKTRMAMLAVAATGLLAATAIEASAEQCGGASWYALTSRTASGERMNPAGLTAAHRTLPLGSKVKVTNQKNGKSLVVR
INDRGPFIKGRVLDLSKGAASRLGFIGAGHTKVCFKPL
>Mature_118_residues
MNFKTRMAMLAVAATGLLAATAIEASAEQCGGASWYALTSRTASGERMNPAGLTAAHRTLPLGSKVKVTNQKNGKSLVVR
INDRGPFIKGRVLDLSKGAASRLGFIGAGHTKVCFKPL

Specific function: Unknown

COG id: COG0797

COG function: function code M; Lipoproteins

Gene ontology:

Cell location: Attached To The Membrane By A Lipid Anchor [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the rlpA family [H]

Homologues:

Organism=Escherichia coli, GI1786852, Length=77, Percent_Identity=51.9480519480519, Blast_Score=80, Evalue=4e-17,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR014733
- InterPro:   IPR009009
- InterPro:   IPR012997 [H]

Pfam domain/function: PF03330 DPBB_1 [H]

EC number: NA

Molecular weight: Translated: 12330; Mature: 12330

Theoretical pI: Translated: 11.46; Mature: 11.46

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
5.1 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
5.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNFKTRMAMLAVAATGLLAATAIEASAEQCGGASWYALTSRTASGERMNPAGLTAAHRTL
CCHHHHHHHHHHHHHHHHHHHHHHCCHHHCCCEEEEEEECCCCCCCCCCCCCCCCCCEEC
PLGSKVKVTNQKNGKSLVVRINDRGPFIKGRVLDLSKGAASRLGFIGAGHTKVCFKPL
CCCCEEEEECCCCCCEEEEEECCCCCEEEEEEEECCCCCCHHCEEEECCCCEEEEECC
>Mature Secondary Structure
MNFKTRMAMLAVAATGLLAATAIEASAEQCGGASWYALTSRTASGERMNPAGLTAAHRTL
CCHHHHHHHHHHHHHHHHHHHHHHCCHHHCCCEEEEEEECCCCCCCCCCCCCCCCCCEEC
PLGSKVKVTNQKNGKSLVVRINDRGPFIKGRVLDLSKGAASRLGFIGAGHTKVCFKPL
CCCCEEEEECCCCCCEEEEEECCCCCEEEEEEEECCCCCCHHCEEEECCCCEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 11759840 [H]