Click here to switch to the map view.

The map label for this gene is 23502823

Identifier: 23502823

GI number: 23502823

Start: 1903895

End: 1904482

Strand: Reverse

Name: 23502823

Synonym: BR1975

Alternate gene names: NA

Gene position: 1904482-1903895 (Counterclockwise)

Preceding gene: 23502824

Following gene: 23502819

Centisome position: 90.35

GC content: 61.05

Gene sequence:

>588_bases
ATGGTCAAGCTGAACAAGATTTATACCCGGACGGGCGACAAGGGCACCACGGGCCTTGCCAGCGGGCCGCGGCGGCTGAA
ATGTGACCTGCGCGTGGAAGCCTATGGCACGGTGGATGAAGCCAATGCCTGTGTCGGCATGGCGCGTATCCATACGGGCG
CGCAGGATGCCCATGCTGAAATCGATGCCATGCTGGCGCGTATCCAGAACGACCTCTTCGACCTTGGGGCCGATCTTTCG
ACGCCGGACGATGGCCAACCGCTTTCCTACGAACCCTTGCGCATTGTCGCCTCGCAGGTTTCGCGCGTCGAAGCGGATAT
CGACCGGCTGAATGCCAATCTGCAACCCCTGCGCTCGTTTATCCTGCCCGGCGGTTCGCCAGCATCTGCGGCACTGCATC
TGGCACGCACCGTGTCGCGCCGCGCGGAACGGTTGATGGTGGCGCTGTCGCGCATGGAAGGCGAAAAGGTTTCACCGGAG
GCGCTGCAATATATCAATCGCCTGTCCGATTTTCTCTTCGTTGCGGGCCGTGCCGTCAATGATAATGGCGCAAGCGATAT
TCTCTGGGTGCCGGGCGCCAATCGTTGA

Upstream 100 bases:

>100_bases
TCCAACAAGATGATGCAATTGTGCGTGTTCCTGCAATTCATCGCGGTGCTTTTGATTGTTGGCGCGATCTATTTCGCGCG
TCATGCAGGCGGACAATAAG

Downstream 100 bases:

>100_bases
GCGAGCGCGGCGGTTCTGTTTTAGAGCGCGTTTCGATCTGATTGAATCAGATCGGCGCTCTAATCCTTTGTTTTGACACG
CGTCTTTTCCGAAAACCGTT

Product: ATP:cob(I)alamin adenosyltransferase

Products: NA

Alternate protein names: Cob(I)alamin adenosyltransferase [H]

Number of amino acids: Translated: 195; Mature: 195

Protein sequence:

>195_residues
MVKLNKIYTRTGDKGTTGLASGPRRLKCDLRVEAYGTVDEANACVGMARIHTGAQDAHAEIDAMLARIQNDLFDLGADLS
TPDDGQPLSYEPLRIVASQVSRVEADIDRLNANLQPLRSFILPGGSPASAALHLARTVSRRAERLMVALSRMEGEKVSPE
ALQYINRLSDFLFVAGRAVNDNGASDILWVPGANR

Sequences:

>Translated_195_residues
MVKLNKIYTRTGDKGTTGLASGPRRLKCDLRVEAYGTVDEANACVGMARIHTGAQDAHAEIDAMLARIQNDLFDLGADLS
TPDDGQPLSYEPLRIVASQVSRVEADIDRLNANLQPLRSFILPGGSPASAALHLARTVSRRAERLMVALSRMEGEKVSPE
ALQYINRLSDFLFVAGRAVNDNGASDILWVPGANR
>Mature_195_residues
MVKLNKIYTRTGDKGTTGLASGPRRLKCDLRVEAYGTVDEANACVGMARIHTGAQDAHAEIDAMLARIQNDLFDLGADLS
TPDDGQPLSYEPLRIVASQVSRVEADIDRLNANLQPLRSFILPGGSPASAALHLARTVSRRAERLMVALSRMEGEKVSPE
ALQYINRLSDFLFVAGRAVNDNGASDILWVPGANR

Specific function: Unknown

COG id: COG2096

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasm (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the Cob(I)alamin adenosyltransferase family [H]

Homologues:

Organism=Homo sapiens, GI16418349, Length=184, Percent_Identity=39.1304347826087, Blast_Score=107, Evalue=5e-24,
Organism=Caenorhabditis elegans, GI115534154, Length=169, Percent_Identity=36.6863905325444, Blast_Score=99, Evalue=2e-21,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR017858
- InterPro:   IPR002779
- InterPro:   IPR016030
- ProDom:   PD007457 [H]

Pfam domain/function: PF01923 Cob_adeno_trans [H]

EC number: =2.5.1.17 [H]

Molecular weight: Translated: 21100; Mature: 21100

Theoretical pI: Translated: 6.79; Mature: 6.79

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVKLNKIYTRTGDKGTTGLASGPRRLKCDLRVEAYGTVDEANACVGMARIHTGAQDAHAE
CCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEEEECCCHHHHHHHHHHHHHHCCCCHHHHH
IDAMLARIQNDLFDLGADLSTPDDGQPLSYEPLRIVASQVSRVEADIDRLNANLQPLRSF
HHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHH
ILPGGSPASAALHLARTVSRRAERLMVALSRMEGEKVSPEALQYINRLSDFLFVAGRAVN
HCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCEEC
DNGASDILWVPGANR
CCCCCCEEECCCCCC
>Mature Secondary Structure
MVKLNKIYTRTGDKGTTGLASGPRRLKCDLRVEAYGTVDEANACVGMARIHTGAQDAHAE
CCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEEEECCCHHHHHHHHHHHHHHCCCCHHHHH
IDAMLARIQNDLFDLGADLSTPDDGQPLSYEPLRIVASQVSRVEADIDRLNANLQPLRSF
HHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHH
ILPGGSPASAALHLARTVSRRAERLMVALSRMEGEKVSPEALQYINRLSDFLFVAGRAVN
HCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCEEC
DNGASDILWVPGANR
CCCCCCEEECCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11234002 [H]