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The map label for this gene is ydeK [H]

Identifier: 23502745

GI number: 23502745

Start: 1826107

End: 1826964

Strand: Reverse

Name: ydeK [H]

Synonym: BR1893

Alternate gene names: 23502745

Gene position: 1826964-1826107 (Counterclockwise)

Preceding gene: 23502746

Following gene: 23502739

Centisome position: 86.68

GC content: 61.42

Gene sequence:

>858_bases
ATGAACAAGACAGCGGGATGGATTAACGGATTTTTAGGGGTGCTGATCTTTTCCGGGTCACTGCCAGCAACGCGACTGGC
CGTGATCGATATCGATCCGACCTTCCTGACCATGGCGCGGGCGTCCATCGCGGGATTGCTTGGAATGGTGTTTCTGCTCC
TGTTTCGGGAGCCTTTTCCGCGCAAAAGCGATGCTGTTTCACTGGTTGTCGTGGCGCTGGGCGTCGTGGTCGGCTTTCCG
CTTCTGACCGGGCTTGCGCTCCAACACATGACCTCCGCCCATGCGATTGTCTTTATCGGCCTGCTGCCGCTTTCGACGGC
GATCTTCGCAGTCCTGCGCGGCGGCGAGCGGCCGCGGCCACTGTTCTGGCTGTTTTCGGTTGTGGGAAGCCTGGTCGTCG
CATCCTATGCCTATGGGCAGGGAAGTCAGTCCACGCTTATGGGCGATGGCTTGATGCTGGCGGCGATCATCGTCTGCGGG
CTTGGCTATGCAGAAGGGGCGCGCCTTTCACGCAGGCTGGGCGGCTGGCAGGTCATATGCTGGGCGCTGGTGTTCGCGCT
GCCCGTCATGTTGCCCTTGAGCGTCTTCACACGCCCTGAGACATGGAATGGCATCGGCGCGATGGCCTGGGGCGGGCTTG
CCTATGTGTCCCTGTTTTCGATGCTGATCGGCTTTGTGTTCTGGTATCGCGGGCTGGCGCAGGGTGGTACGGCAACGGTC
GGCCAGCTTCAGCTCCTCCAGCCTTTTTTCGGGCTGATGCTGGCGGCAGGCGTGGCAGGGGAACCGGTCAGCATGGGCAT
GGTAGCAACGGCGGCCGTGGTTGTTGTCTGCGTGGCGGGTGCGAAGAAATTCGCTTAG

Upstream 100 bases:

>100_bases
TTGCCAGAATTGTCTGGAAACTGTCTCTGATTTTTTAGACGAGTTCACGGCATTGTCCGTAAAAGCCATATACGATTTTG
CAGAAAGCCGAAAAGACAGA

Downstream 100 bases:

>100_bases
AGCATTTTCGAGCCAAAACTGTTTCACACTTTTGCTGGAAATGCTCTAAATAAATGCCCAGACGGTCGTGCGCTTCACTT
CCGCGTCTTCAAGGGCGCGC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 285; Mature: 285

Protein sequence:

>285_residues
MNKTAGWINGFLGVLIFSGSLPATRLAVIDIDPTFLTMARASIAGLLGMVFLLLFREPFPRKSDAVSLVVVALGVVVGFP
LLTGLALQHMTSAHAIVFIGLLPLSTAIFAVLRGGERPRPLFWLFSVVGSLVVASYAYGQGSQSTLMGDGLMLAAIIVCG
LGYAEGARLSRRLGGWQVICWALVFALPVMLPLSVFTRPETWNGIGAMAWGGLAYVSLFSMLIGFVFWYRGLAQGGTATV
GQLQLLQPFFGLMLAAGVAGEPVSMGMVATAAVVVVCVAGAKKFA

Sequences:

>Translated_285_residues
MNKTAGWINGFLGVLIFSGSLPATRLAVIDIDPTFLTMARASIAGLLGMVFLLLFREPFPRKSDAVSLVVVALGVVVGFP
LLTGLALQHMTSAHAIVFIGLLPLSTAIFAVLRGGERPRPLFWLFSVVGSLVVASYAYGQGSQSTLMGDGLMLAAIIVCG
LGYAEGARLSRRLGGWQVICWALVFALPVMLPLSVFTRPETWNGIGAMAWGGLAYVSLFSMLIGFVFWYRGLAQGGTATV
GQLQLLQPFFGLMLAAGVAGEPVSMGMVATAAVVVVCVAGAKKFA
>Mature_285_residues
MNKTAGWINGFLGVLIFSGSLPATRLAVIDIDPTFLTMARASIAGLLGMVFLLLFREPFPRKSDAVSLVVVALGVVVGFP
LLTGLALQHMTSAHAIVFIGLLPLSTAIFAVLRGGERPRPLFWLFSVVGSLVVASYAYGQGSQSTLMGDGLMLAAIIVCG
LGYAEGARLSRRLGGWQVICWALVFALPVMLPLSVFTRPETWNGIGAMAWGGLAYVSLFSMLIGFVFWYRGLAQGGTATV
GQLQLLQPFFGLMLAAGVAGEPVSMGMVATAAVVVVCVAGAKKFA

Specific function: Unknown

COG id: COG0697

COG function: function code GER; Permeases of the drug/metabolite transporter (DMT) superfamily

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 2 DUF6 domains [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000620 [H]

Pfam domain/function: PF00892 DUF6 [H]

EC number: NA

Molecular weight: Translated: 29947; Mature: 29947

Theoretical pI: Translated: 10.07; Mature: 10.07

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
4.2 %Met     (Translated Protein)
5.3 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
4.2 %Met     (Mature Protein)
5.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNKTAGWINGFLGVLIFSGSLPATRLAVIDIDPTFLTMARASIAGLLGMVFLLLFREPFP
CCCCHHHHHHHHHHHHHCCCCCCCEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHCCCCC
RKSDAVSLVVVALGVVVGFPLLTGLALQHMTSAHAIVFIGLLPLSTAIFAVLRGGERPRP
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCH
LFWLFSVVGSLVVASYAYGQGSQSTLMGDGLMLAAIIVCGLGYAEGARLSRRLGGWQVIC
HHHHHHHHHHHHHHHHHCCCCCCCHHHCCHHHHHHHHHHCCCCHHHHHHHHHHCCHHHHH
WALVFALPVMLPLSVFTRPETWNGIGAMAWGGLAYVSLFSMLIGFVFWYRGLAQGGTATV
HHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHH
GQLQLLQPFFGLMLAAGVAGEPVSMGMVATAAVVVVCVAGAKKFA
HHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MNKTAGWINGFLGVLIFSGSLPATRLAVIDIDPTFLTMARASIAGLLGMVFLLLFREPFP
CCCCHHHHHHHHHHHHHCCCCCCCEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHCCCCC
RKSDAVSLVVVALGVVVGFPLLTGLALQHMTSAHAIVFIGLLPLSTAIFAVLRGGERPRP
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCH
LFWLFSVVGSLVVASYAYGQGSQSTLMGDGLMLAAIIVCGLGYAEGARLSRRLGGWQVIC
HHHHHHHHHHHHHHHHHCCCCCCCHHHCCHHHHHHHHHHCCCCHHHHHHHHHHCCHHHHH
WALVFALPVMLPLSVFTRPETWNGIGAMAWGGLAYVSLFSMLIGFVFWYRGLAQGGTATV
HHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHH
GQLQLLQPFFGLMLAAGVAGEPVSMGMVATAAVVVVCVAGAKKFA
HHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]