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The map label for this gene is ctpA [H]

Identifier: 23502690

GI number: 23502690

Start: 1768435

End: 1769709

Strand: Reverse

Name: ctpA [H]

Synonym: BR1837

Alternate gene names: 23502690

Gene position: 1769709-1768435 (Counterclockwise)

Preceding gene: 23502691

Following gene: 23502689

Centisome position: 83.96

GC content: 58.75

Gene sequence:

>1275_bases
ATGGTGATGGTCCAGGGCGCACCAGCTTCCACCGCTTTTGCGGCAGGAAAAGACAGCGATGTCTATAAGGAGCTGGCTCT
TTTCGGCGATATTTTCGAGCGTGTACGCGCGCAATATGTGACGCCGCCCGACGACAAGAAGCTGATCGAGAGCGCCATCA
ATGGCATGCTGACTTCTCTTGATCCCCATTCGTCCTATCTCAACCCGGAAGCCGCGCAGGACATGCGTGTGCAGACCAAG
GGTGAGTTTGGCGGCCTTGGCATCGAAGTCACCATGGACAATGATCTCGTGAAGGTCATCGCGCCGATCGACGATACGCC
CGCCTCGAAGGCCGGTGTGCTGTCGGGCGACCTGATCACCAAGATCGACGGACAGGAAGTGCGCGGCCTTTCGCTGACCG
ACGCTGTGGACAAGATGCGCGGCGAGGTTGGTGCGCCAATCGAACTGACGATCCTGCGCAAGGGCGCCGACAAGCCGATC
ACGCTCAAGATCAATCGCGCCATTATCAAGGTGAAGGCGGTTCGCTCGCGCGTTGAGAATGATGTTGGCTATCTGCGTAT
CATCTCGTTTACCGAACAGACCTCTGAAGACCTCAAGAAGGCGATCAAGGACATTCAGGAAAAGGTTCCCGCTGACAAGC
TCAAGGGCTATGTGCTCGACCTTCGTCTCAATCCGGGCGGCCTTCTGGATCAGGCGGTTGCCGTTTCCGATGCCTTCCTC
GACAAGGGCGAGATCGTTTCCACCCGTGGCCGCGATCCGCAGGATGTGACCCGTTTCGATGCCCGTAAGGGTGACCTGAC
GAATGGCAAGCCGCTGATCGTTCTGATCAATGGCGGTTCGGCCAGTGCCTCGGAAATCGTTGCCGGTGCGCTTCAGGATC
ATCGCCGCGCCACGGTGCTCGGTACGCAGTCCTTCGGCAAGGGCTCTGTGCAGACAATCATCCCGCTTGGCGAAAACGGT
TCGCTGCGTCTGACGACGGCGCTTTATTACACGCCGTCTGGCAAGTCGATCCAGGGCAAGGGCATTACGCCGGACATCAA
GGTGGATCAGCCGCTGCCGCCGGAACTTAAAGGCGAGGACGTTGTTCGCGGCGAATCCGAACTCAAGGGCCATATCAAGG
GCAATGCCGAAGATGCGAGCGGCTCCGGTTCGTCGGCTTATGTTCCGCCTGATCCGAAGGATGATCTCCAGCTCAATGAG
GCACTGAAGCTTCTGCGGGGCGAAGTGCCCAATGCCGCTTTCCCGCCGGACCCGAAAAAGGGCGTGCTGAACTGA

Upstream 100 bases:

>100_bases
GATCCCGCCCCGTGGTGGACTGAACGGCTTTCTGGAAGGACACAAAATGATACGTAAACTGTCGCTGCTGTTCGCCGGGG
CCCTTCTGGGGGCATCCGCC

Downstream 100 bases:

>100_bases
CCCTGAAATGAGCAAGACAAAAACGCGGGAGCCCTGGCTTCCGCGTTTTGCTTTCGGTCAAAGTGCGTTTCATATGTTTG
CTGGGCAGGCATCTGGTCTG

Product: carboxyl-terminal protease

Products: NA

Alternate protein names: C-terminal-processing protease [H]

Number of amino acids: Translated: 424; Mature: 424

Protein sequence:

>424_residues
MVMVQGAPASTAFAAGKDSDVYKELALFGDIFERVRAQYVTPPDDKKLIESAINGMLTSLDPHSSYLNPEAAQDMRVQTK
GEFGGLGIEVTMDNDLVKVIAPIDDTPASKAGVLSGDLITKIDGQEVRGLSLTDAVDKMRGEVGAPIELTILRKGADKPI
TLKINRAIIKVKAVRSRVENDVGYLRIISFTEQTSEDLKKAIKDIQEKVPADKLKGYVLDLRLNPGGLLDQAVAVSDAFL
DKGEIVSTRGRDPQDVTRFDARKGDLTNGKPLIVLINGGSASASEIVAGALQDHRRATVLGTQSFGKGSVQTIIPLGENG
SLRLTTALYYTPSGKSIQGKGITPDIKVDQPLPPELKGEDVVRGESELKGHIKGNAEDASGSGSSAYVPPDPKDDLQLNE
ALKLLRGEVPNAAFPPDPKKGVLN

Sequences:

>Translated_424_residues
MVMVQGAPASTAFAAGKDSDVYKELALFGDIFERVRAQYVTPPDDKKLIESAINGMLTSLDPHSSYLNPEAAQDMRVQTK
GEFGGLGIEVTMDNDLVKVIAPIDDTPASKAGVLSGDLITKIDGQEVRGLSLTDAVDKMRGEVGAPIELTILRKGADKPI
TLKINRAIIKVKAVRSRVENDVGYLRIISFTEQTSEDLKKAIKDIQEKVPADKLKGYVLDLRLNPGGLLDQAVAVSDAFL
DKGEIVSTRGRDPQDVTRFDARKGDLTNGKPLIVLINGGSASASEIVAGALQDHRRATVLGTQSFGKGSVQTIIPLGENG
SLRLTTALYYTPSGKSIQGKGITPDIKVDQPLPPELKGEDVVRGESELKGHIKGNAEDASGSGSSAYVPPDPKDDLQLNE
ALKLLRGEVPNAAFPPDPKKGVLN
>Mature_424_residues
MVMVQGAPASTAFAAGKDSDVYKELALFGDIFERVRAQYVTPPDDKKLIESAINGMLTSLDPHSSYLNPEAAQDMRVQTK
GEFGGLGIEVTMDNDLVKVIAPIDDTPASKAGVLSGDLITKIDGQEVRGLSLTDAVDKMRGEVGAPIELTILRKGADKPI
TLKINRAIIKVKAVRSRVENDVGYLRIISFTEQTSEDLKKAIKDIQEKVPADKLKGYVLDLRLNPGGLLDQAVAVSDAFL
DKGEIVSTRGRDPQDVTRFDARKGDLTNGKPLIVLINGGSASASEIVAGALQDHRRATVLGTQSFGKGSVQTIIPLGENG
SLRLTTALYYTPSGKSIQGKGITPDIKVDQPLPPELKGEDVVRGESELKGHIKGNAEDASGSGSSAYVPPDPKDDLQLNE
ALKLLRGEVPNAAFPPDPKKGVLN

Specific function: Involved in protection of the bacterium from thermal and osmotic stresses (Potential) [H]

COG id: COG0793

COG function: function code M; Periplasmic protease

Gene ontology:

Cell location: Secreted (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 PDZ (DHR) domain [H]

Homologues:

Organism=Escherichia coli, GI1788134, Length=322, Percent_Identity=31.9875776397516, Blast_Score=128, Evalue=7e-31,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001478
- InterPro:   IPR005151
- InterPro:   IPR004447 [H]

Pfam domain/function: PF00595 PDZ; PF03572 Peptidase_S41 [H]

EC number: =3.4.21.102 [H]

Molecular weight: Translated: 45210; Mature: 45210

Theoretical pI: Translated: 5.25; Mature: 5.25

Prosite motif: PS50106 PDZ

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
1.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
1.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVMVQGAPASTAFAAGKDSDVYKELALFGDIFERVRAQYVTPPDDKKLIESAINGMLTSL
CEEECCCCCCCEECCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHEECC
DPHSSYLNPEAAQDMRVQTKGEFGGLGIEVTMDNDLVKVIAPIDDTPASKAGVLSGDLIT
CCCCCCCCCHHHHCCEEEECCCCCCEEEEEEECCCEEEEEECCCCCCCCCCCCCCCCEEE
KIDGQEVRGLSLTDAVDKMRGEVGAPIELTILRKGADKPITLKINRAIIKVKAVRSRVEN
EECCCCCCCCCHHHHHHHHHCCCCCCEEEEEEECCCCCCEEEEECCEEEHHHHHHHHHHC
DVGYLRIISFTEQTSEDLKKAIKDIQEKVPADKLKGYVLDLRLNPGGLLDQAVAVSDAFL
CCCEEEEEEEHHHHHHHHHHHHHHHHHHCCHHHHCCEEEEEEECCCCCHHHHHHHHHHHC
DKGEIVSTRGRDPQDVTRFDARKGDLTNGKPLIVLINGGSASASEIVAGALQDHRRATVL
CCCCEEECCCCCHHHHHHHCCCCCCCCCCCEEEEEEECCCCCHHHHHHHHHHHCCEEEEE
GTQSFGKGSVQTIIPLGENGSLRLTTALYYTPSGKSIQGKGITPDIKVDQPLPPELKGED
ECCCCCCCCEEEEEEECCCCCEEEEEEEEECCCCCEEECCCCCCCCCCCCCCCCCCCCCC
VVRGESELKGHIKGNAEDASGSGSSAYVPPDPKDDLQLNEALKLLRGEVPNAAFPPDPKK
EECCHHHCCEEECCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCC
GVLN
CCCC
>Mature Secondary Structure
MVMVQGAPASTAFAAGKDSDVYKELALFGDIFERVRAQYVTPPDDKKLIESAINGMLTSL
CEEECCCCCCCEECCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHEECC
DPHSSYLNPEAAQDMRVQTKGEFGGLGIEVTMDNDLVKVIAPIDDTPASKAGVLSGDLIT
CCCCCCCCCHHHHCCEEEECCCCCCEEEEEEECCCEEEEEECCCCCCCCCCCCCCCCEEE
KIDGQEVRGLSLTDAVDKMRGEVGAPIELTILRKGADKPITLKINRAIIKVKAVRSRVEN
EECCCCCCCCCHHHHHHHHHCCCCCCEEEEEEECCCCCCEEEEECCEEEHHHHHHHHHHC
DVGYLRIISFTEQTSEDLKKAIKDIQEKVPADKLKGYVLDLRLNPGGLLDQAVAVSDAFL
CCCEEEEEEEHHHHHHHHHHHHHHHHHHCCHHHHCCEEEEEEECCCCCHHHHHHHHHHHC
DKGEIVSTRGRDPQDVTRFDARKGDLTNGKPLIVLINGGSASASEIVAGALQDHRRATVL
CCCCEEECCCCCHHHHHHHCCCCCCCCCCCEEEEEEECCCCCHHHHHHHHHHHCCEEEEE
GTQSFGKGSVQTIIPLGENGSLRLTTALYYTPSGKSIQGKGITPDIKVDQPLPPELKGED
ECCCCCCCCEEEEEEECCCCCEEEEEEEEECCCCCEEECCCCCCCCCCCCCCCCCCCCCC
VVRGESELKGHIKGNAEDASGSGSSAYVPPDPKDDLQLNEALKLLRGEVPNAAFPPDPKK
EECCHHHCCEEECCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCC
GVLN
CCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9141685 [H]