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The map label for this gene is 23502438

Identifier: 23502438

GI number: 23502438

Start: 1524583

End: 1525548

Strand: Reverse

Name: 23502438

Synonym: BR1574

Alternate gene names: NA

Gene position: 1525548-1524583 (Counterclockwise)

Preceding gene: 23502439

Following gene: 23502434

Centisome position: 72.38

GC content: 62.84

Gene sequence:

>966_bases
ATGGAATTGCTTGCATCCTTGCGCCACGCGGTGGATGGCGCGCTTGAGGGCGTGGCATTGGCCGATCTGAAGCGCGCATC
CGAGATTCTCTCGCGCCGCTATCGTGCGGAAACGCGCGATGGCCGCCTGCATATTTGCGACGAGCTTGCGGCGAAAGCCT
ATCTGGCGGCACGCTTGCCCGCGACCTATGCGGCGGTGCGCGCCAGTCTGGACAGCGCCGCAGAAAGCTGCCCCGAATTT
GCGCCGCAATCGATGCTTGATGTGGGGGCGGGGCCGGGTACTGCGCTTTGGGCGGCAAAGCAATGCTGGCCGGAGCTTCA
ATCGGCAACCATGATCGAGGCCAGTCCTGCCATTCGCGCTGTGGGCAGCGATCTTGCGCGCCATAGTGGTCTTACCATGC
TTGACTGGCGGGCAGGGGATGTGGTGCGCGAAAGACTGGAATTTCCGTATGCCGATCTCGTTACCATCGCCTATGTACTG
GATGAGCTTGCACCCGATGAGCGTGAAAAGCTGATCGAGCGGTTGTGGGCCTCCGCGCGGCAGATGTTCGTCATTGTGGA
ACCCGGCACACCGGCAGGCTGGCGGCGCATCCTCGATGCACGCAAGGCTCTGATCGCCAGGGGCGCCTATATCGCCGCGC
CATGCCCGCACGGGCTGGATTGCCCGCTGGTTGCGCCCGACTGGTGCCATTTCTCGCAGCGCGTGGCGCGGTCTCGTATT
CATCGCATGACGAAGGATGCGGAAGTGCCGTGGGAGGACGAGAAATTCGTCTATCTTGCCGCTGTGCGTGAAAAGCCCGC
TGGCGTGGCCGCGCGGGTGATTGCTCCGCCAAGGGTTGGCGGCGGCAAGGTTTCCATCAAGCTTTGCAAGCAGGACGGGC
AGGCGGAAGAACGTCTGACCACGAAACGGGACGGTGAATTCTTCCGCCGGGCGCGCCGTGCGGATTGGGGTGACGCTTTT
TTATGA

Upstream 100 bases:

>100_bases
CGTGGATCACGCCGTCTCACCTGACCACGATGGGCTTCTATATCCTGCGCGTTCGCTCGAACCTTGTGGATGTGAAGCAG
GTTCTGGAGCGTTAATCCTG

Downstream 100 bases:

>100_bases
TGCTTGCAGAGCTGACCTTGAAGCCGGGCGGCTGATCATGAACACCATGGCGGCAGCGGCAAAGCACAGCGAACCTGCCA
GAATGAGTGCGGGCGTATAG

Product: hypothetical protein

Products: NA

Alternate protein names: Methyltransferase Type; SAM Methyltransferase; Methyltransferase; rRNA Methylase; rRNA Methylase-Like Protein

Number of amino acids: Translated: 321; Mature: 321

Protein sequence:

>321_residues
MELLASLRHAVDGALEGVALADLKRASEILSRRYRAETRDGRLHICDELAAKAYLAARLPATYAAVRASLDSAAESCPEF
APQSMLDVGAGPGTALWAAKQCWPELQSATMIEASPAIRAVGSDLARHSGLTMLDWRAGDVVRERLEFPYADLVTIAYVL
DELAPDEREKLIERLWASARQMFVIVEPGTPAGWRRILDARKALIARGAYIAAPCPHGLDCPLVAPDWCHFSQRVARSRI
HRMTKDAEVPWEDEKFVYLAAVREKPAGVAARVIAPPRVGGGKVSIKLCKQDGQAEERLTTKRDGEFFRRARRADWGDAF
L

Sequences:

>Translated_321_residues
MELLASLRHAVDGALEGVALADLKRASEILSRRYRAETRDGRLHICDELAAKAYLAARLPATYAAVRASLDSAAESCPEF
APQSMLDVGAGPGTALWAAKQCWPELQSATMIEASPAIRAVGSDLARHSGLTMLDWRAGDVVRERLEFPYADLVTIAYVL
DELAPDEREKLIERLWASARQMFVIVEPGTPAGWRRILDARKALIARGAYIAAPCPHGLDCPLVAPDWCHFSQRVARSRI
HRMTKDAEVPWEDEKFVYLAAVREKPAGVAARVIAPPRVGGGKVSIKLCKQDGQAEERLTTKRDGEFFRRARRADWGDAF
L
>Mature_321_residues
MELLASLRHAVDGALEGVALADLKRASEILSRRYRAETRDGRLHICDELAAKAYLAARLPATYAAVRASLDSAAESCPEF
APQSMLDVGAGPGTALWAAKQCWPELQSATMIEASPAIRAVGSDLARHSGLTMLDWRAGDVVRERLEFPYADLVTIAYVL
DELAPDEREKLIERLWASARQMFVIVEPGTPAGWRRILDARKALIARGAYIAAPCPHGLDCPLVAPDWCHFSQRVARSRI
HRMTKDAEVPWEDEKFVYLAAVREKPAGVAARVIAPPRVGGGKVSIKLCKQDGQAEERLTTKRDGEFFRRARRADWGDAF
L

Specific function: Unknown

COG id: COG5459

COG function: function code J; Predicted rRNA methylase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Homo sapiens, GI12232389, Length=286, Percent_Identity=29.020979020979, Blast_Score=105, Evalue=5e-23,
Organism=Homo sapiens, GI71999135, Length=271, Percent_Identity=28.4132841328413, Blast_Score=97, Evalue=2e-20,
Organism=Caenorhabditis elegans, GI17507049, Length=179, Percent_Identity=27.3743016759777, Blast_Score=82, Evalue=4e-16,
Organism=Drosophila melanogaster, GI19921026, Length=288, Percent_Identity=28.125, Blast_Score=80, Evalue=2e-15,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 35411; Mature: 35411

Theoretical pI: Translated: 8.06; Mature: 8.06

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.2 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
2.2 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MELLASLRHAVDGALEGVALADLKRASEILSRRYRAETRDGRLHICDELAAKAYLAARLP
CHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCCCEEHHHHHHHHHHHHHHCC
ATYAAVRASLDSAAESCPEFAPQSMLDVGAGPGTALWAAKQCWPELQSATMIEASPAIRA
HHHHHHHHHHHHHHHHHHHHCCHHHHHCCCCCCHHHHHHHHHHHHHHHCEEECCCHHHHH
VGSDLARHSGLTMLDWRAGDVVRERLEFPYADLVTIAYVLDELAPDEREKLIERLWASAR
HHHHHHHHCCCEEEECCHHHHHHHHHCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCC
QMFVIVEPGTPAGWRRILDARKALIARGAYIAAPCPHGLDCPLVAPDWCHFSQRVARSRI
EEEEEECCCCCHHHHHHHHHHHHHHHCCCEEECCCCCCCCCCCCCCHHHHHHHHHHHHHH
HRMTKDAEVPWEDEKFVYLAAVREKPAGVAARVIAPPRVGGGKVSIKLCKQDGQAEERLT
HHHHCCCCCCCCCCCEEEEEEECCCCCCCEEEEECCCCCCCCEEEEEEECCCCCHHHHHH
TKRDGEFFRRARRADWGDAFL
HHCCHHHHHHHHCCCCCCCCC
>Mature Secondary Structure
MELLASLRHAVDGALEGVALADLKRASEILSRRYRAETRDGRLHICDELAAKAYLAARLP
CHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCCCEEHHHHHHHHHHHHHHCC
ATYAAVRASLDSAAESCPEFAPQSMLDVGAGPGTALWAAKQCWPELQSATMIEASPAIRA
HHHHHHHHHHHHHHHHHHHHCCHHHHHCCCCCCHHHHHHHHHHHHHHHCEEECCCHHHHH
VGSDLARHSGLTMLDWRAGDVVRERLEFPYADLVTIAYVLDELAPDEREKLIERLWASAR
HHHHHHHHCCCEEEECCHHHHHHHHHCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCC
QMFVIVEPGTPAGWRRILDARKALIARGAYIAAPCPHGLDCPLVAPDWCHFSQRVARSRI
EEEEEECCCCCHHHHHHHHHHHHHHHCCCEEECCCCCCCCCCCCCCHHHHHHHHHHHHHH
HRMTKDAEVPWEDEKFVYLAAVREKPAGVAARVIAPPRVGGGKVSIKLCKQDGQAEERLT
HHHHCCCCCCCCCCCEEEEEEECCCCCCCEEEEECCCCCCCCEEEEEEECCCCCHHHHHH
TKRDGEFFRRARRADWGDAFL
HHCCHHHHHHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA