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The map label for this gene is petA [H]

Identifier: 23502411

GI number: 23502411

Start: 1492299

End: 1492862

Strand: Reverse

Name: petA [H]

Synonym: BR1543

Alternate gene names: 23502411

Gene position: 1492862-1492299 (Counterclockwise)

Preceding gene: 23502413

Following gene: 23502410

Centisome position: 70.83

GC content: 58.16

Gene sequence:

>564_bases
GTGAGCGCACACGACACGGCTGAGCCGACACGGCGTGATTTTTTGTATATTGCGACGGGAATGGCCGGTGTCGTCGGAGT
TGGCGGACTGGCTTGGCCGTTTATCGACCAGATGCGTCCGGACGCTTCGACACTCGCGGCAGCGTCTATCGAAGTTGACG
TTTCTTCCCTTGCGGAAGGCGCGTCCCTGACCGTCAAATGGCGTGGTAAGCCGGTTTTTATCCGCAATCGTACCGCCAAG
GAAGTGGAAGAGAGCAAAACGACCGCACTTGGTGATCTGAAAGATCCCAATGCGCGTAATGCCAATCTTCCAACGGATGC
GGAAGCAACCGACCTTGCCCGCTCTGCGGGCGAGGGGAAGGAAAACTGGCTCGTGATGATCGGGGTCTGCACGCATCTTG
GTTGTGTGCCGCTCGGTGAATCCGGTGCCTTTGGCGGCTGGTTCTGCCCTTGCCATGGCTCGACCTATGATACTGCTGGC
CGCATCCGCAGCGGCCCGGCACCGGAAAACATGCACATCCCGCAATATGCGTTTACTTCCGATACGGTCATCAGGATCGG
CTAA

Upstream 100 bases:

>100_bases
AATTTCGTCCTGTGAGCACTTGCGGGATAATTTTTGGCAGGTGCAAAAGAGGGCGAGGGGAGAGTTCAATTGAACATGCA
GGTTGAAAAGGAATTGGCAC

Downstream 100 bases:

>100_bases
CAGGTCTTGGGGAGACAGAACATGAGTGGTGGACACTCCACATACACGCCGAAGACCGGCATCGAGAAATGGGTGGACGA
ACGGCTTCCTTTGCCGCGCC

Product: ubiquinol-cytochrome c reductase, iron-sulfur subunit

Products: NA

Alternate protein names: Rieske iron-sulfur protein; RISP [H]

Number of amino acids: Translated: 187; Mature: 186

Protein sequence:

>187_residues
MSAHDTAEPTRRDFLYIATGMAGVVGVGGLAWPFIDQMRPDASTLAAASIEVDVSSLAEGASLTVKWRGKPVFIRNRTAK
EVEESKTTALGDLKDPNARNANLPTDAEATDLARSAGEGKENWLVMIGVCTHLGCVPLGESGAFGGWFCPCHGSTYDTAG
RIRSGPAPENMHIPQYAFTSDTVIRIG

Sequences:

>Translated_187_residues
MSAHDTAEPTRRDFLYIATGMAGVVGVGGLAWPFIDQMRPDASTLAAASIEVDVSSLAEGASLTVKWRGKPVFIRNRTAK
EVEESKTTALGDLKDPNARNANLPTDAEATDLARSAGEGKENWLVMIGVCTHLGCVPLGESGAFGGWFCPCHGSTYDTAG
RIRSGPAPENMHIPQYAFTSDTVIRIG
>Mature_186_residues
SAHDTAEPTRRDFLYIATGMAGVVGVGGLAWPFIDQMRPDASTLAAASIEVDVSSLAEGASLTVKWRGKPVFIRNRTAKE
VEESKTTALGDLKDPNARNANLPTDAEATDLARSAGEGKENWLVMIGVCTHLGCVPLGESGAFGGWFCPCHGSTYDTAGR
IRSGPAPENMHIPQYAFTSDTVIRIG

Specific function: Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis [H]

COG id: COG0723

COG function: function code C; Rieske Fe-S protein

Gene ontology:

Cell location: Cell membrane; Single-pass membrane protein [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 Rieske domain [H]

Homologues:

Organism=Homo sapiens, GI163644321, Length=190, Percent_Identity=43.6842105263158, Blast_Score=168, Evalue=3e-42,
Organism=Caenorhabditis elegans, GI17540418, Length=143, Percent_Identity=43.3566433566434, Blast_Score=147, Evalue=4e-36,
Organism=Saccharomyces cerevisiae, GI6320811, Length=176, Percent_Identity=45.4545454545455, Blast_Score=167, Evalue=9e-43,
Organism=Drosophila melanogaster, GI24580896, Length=187, Percent_Identity=43.3155080213904, Blast_Score=154, Evalue=4e-38,
Organism=Drosophila melanogaster, GI17864350, Length=143, Percent_Identity=38.4615384615385, Blast_Score=72, Evalue=2e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR017941
- InterPro:   IPR014349
- InterPro:   IPR005805
- InterPro:   IPR006311
- InterPro:   IPR019470
- InterPro:   IPR006317 [H]

Pfam domain/function: PF00355 Rieske; PF10399 UCR_Fe-S_N [H]

EC number: =1.10.2.2 [H]

Molecular weight: Translated: 19838; Mature: 19707

Theoretical pI: Translated: 5.25; Mature: 5.25

Prosite motif: PS00199 RIESKE_1 ; PS00200 RIESKE_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.1 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
4.8 %Cys+Met (Translated Protein)
2.2 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSAHDTAEPTRRDFLYIATGMAGVVGVGGLAWPFIDQMRPDASTLAAASIEVDVSSLAEG
CCCCCCCCCCHHCEEEEECCCHHHHHCCCHHHHHHHHCCCCHHHHEEEEEEEEHHHHCCC
ASLTVKWRGKPVFIRNRTAKEVEESKTTALGDLKDPNARNANLPTDAEATDLARSAGEGK
CEEEEEECCCEEEEECCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCC
ENWLVMIGVCTHLGCVPLGESGAFGGWFCPCHGSTYDTAGRIRSGPAPENMHIPQYAFTS
CCEEEEEEEHHHCCCEECCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCEECCC
DTVIRIG
CEEEEEC
>Mature Secondary Structure 
SAHDTAEPTRRDFLYIATGMAGVVGVGGLAWPFIDQMRPDASTLAAASIEVDVSSLAEG
CCCCCCCCCHHCEEEEECCCHHHHHCCCHHHHHHHHCCCCHHHHEEEEEEEEHHHHCCC
ASLTVKWRGKPVFIRNRTAKEVEESKTTALGDLKDPNARNANLPTDAEATDLARSAGEGK
CEEEEEECCCEEEEECCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCC
ENWLVMIGVCTHLGCVPLGESGAFGGWFCPCHGSTYDTAGRIRSGPAPENMHIPQYAFTS
CCEEEEEEEHHHCCCEECCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCEECCC
DTVIRIG
CEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 2821268; 3004982; 2821272; 1323023; 1313292 [H]