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The map label for this gene is ypfJ [H]

Identifier: 23502354

GI number: 23502354

Start: 1440927

End: 1441853

Strand: Reverse

Name: ypfJ [H]

Synonym: BR1485

Alternate gene names: 23502354

Gene position: 1441853-1440927 (Counterclockwise)

Preceding gene: 23502355

Following gene: 23502351

Centisome position: 68.41

GC content: 61.27

Gene sequence:

>927_bases
ATGCGCTGGCAAGGCCGTAGGCAAAGCGACAATGTTGAAGATCTGCGCGGTGAGCAGGGTGGTGGGGTTGGCGGCGGCTT
CGGCCGCGGGGGTGGTTTCGGCGGCCCCGGCTTCAGGATCGTGCGCGGCGGTGGAATTTCCGGCATTCTCATTCTCGTCG
TCATGTTCTTCGTGTTGCGCGCGGTTGGCATCGATCCGATGCCCATCCTCTTTGGCGACGGCAGCATGAGCCCGACCGTG
CAGACGCAAGGCACGGGCCGCACGGTGGCTGAAGGCGGCACTGTCGCCAATGACGAGACGACGCAGTTCGCCCGCACCGT
TCTGGCCGAGACAGAAGATGTCTGGAGCGGTATTTTCCAGTCGCGCGGCCAGACCTATACGCCGCCGACGATGGTGCTGT
TTTCCGATCAGGTCCGTTCGGCCTGCGGCTATGCTTCGGCTGCTTCCGGCCCGTTCTACTGTCCCGGCGACCGTAAGCTT
TATATCGACCTCAGCTTCTACAAGGAGCTTGCCAATCGCTTTGGCGCTTCGGGCGATTTCGCGCAGGCCTATGTTCTGGC
GCATGAAGTGGGCCACCATGTCCAGAATCTTCTGGGCATCCTGCCGAAATTCAACCAGATGCGCCAGCAGATGAGCGAGG
CGCAGGCCAACCAGATGTCGGTGCGCGTCGAGCTTCAGGCCGATTGCCTTGCGGGCGTATGGGGCCACTACACAGACCAG
AAGGGCATTCTGGAAGCGGGCGACCTTGAGGAAGCCTTGAACGCGGCGCATCAGATCGGTGATGACACATTACAGCGTCG
CAGCCAGGGCTATGTCGTACCGGAAAGCTTCAACCATGGCACCTCCGCGCAACGCGCCAAGTGGTTCCAGCGTGGGTTCG
ATAGCGGTCAGCTTGGATCGTGTGACACGTTCAGCGGTGATGTTTAG

Upstream 100 bases:

>100_bases
CTTTTTATGTTGCCGTGCGAACTCTTTATGCGACAATTACCTATGATGAAATGATGCCGTTTTGTTCAAGGCGGCGCGGA
GCAGGGGGAGTGGTTGTTCA

Downstream 100 bases:

>100_bases
AGCGCGTTTCGATCTGATTGAATCAGATCGGCGCTCTAATCCTTTGTTTTGACGCGCATATTTTCCGAAAACCGTTTCAC
ACTTTTCAGGATGCGCTCTA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 308; Mature: 308

Protein sequence:

>308_residues
MRWQGRRQSDNVEDLRGEQGGGVGGGFGRGGGFGGPGFRIVRGGGISGILILVVMFFVLRAVGIDPMPILFGDGSMSPTV
QTQGTGRTVAEGGTVANDETTQFARTVLAETEDVWSGIFQSRGQTYTPPTMVLFSDQVRSACGYASAASGPFYCPGDRKL
YIDLSFYKELANRFGASGDFAQAYVLAHEVGHHVQNLLGILPKFNQMRQQMSEAQANQMSVRVELQADCLAGVWGHYTDQ
KGILEAGDLEEALNAAHQIGDDTLQRRSQGYVVPESFNHGTSAQRAKWFQRGFDSGQLGSCDTFSGDV

Sequences:

>Translated_308_residues
MRWQGRRQSDNVEDLRGEQGGGVGGGFGRGGGFGGPGFRIVRGGGISGILILVVMFFVLRAVGIDPMPILFGDGSMSPTV
QTQGTGRTVAEGGTVANDETTQFARTVLAETEDVWSGIFQSRGQTYTPPTMVLFSDQVRSACGYASAASGPFYCPGDRKL
YIDLSFYKELANRFGASGDFAQAYVLAHEVGHHVQNLLGILPKFNQMRQQMSEAQANQMSVRVELQADCLAGVWGHYTDQ
KGILEAGDLEEALNAAHQIGDDTLQRRSQGYVVPESFNHGTSAQRAKWFQRGFDSGQLGSCDTFSGDV
>Mature_308_residues
MRWQGRRQSDNVEDLRGEQGGGVGGGFGRGGGFGGPGFRIVRGGGISGILILVVMFFVLRAVGIDPMPILFGDGSMSPTV
QTQGTGRTVAEGGTVANDETTQFARTVLAETEDVWSGIFQSRGQTYTPPTMVLFSDQVRSACGYASAASGPFYCPGDRKL
YIDLSFYKELANRFGASGDFAQAYVLAHEVGHHVQNLLGILPKFNQMRQQMSEAQANQMSVRVELQADCLAGVWGHYTDQ
KGILEAGDLEEALNAAHQIGDDTLQRRSQGYVVPESFNHGTSAQRAKWFQRGFDSGQLGSCDTFSGDV

Specific function: Unknown

COG id: COG2321

COG function: function code R; Predicted metalloprotease

Gene ontology:

Cell location: Membrane; Single-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1788819, Length=308, Percent_Identity=50.3246753246753, Blast_Score=294, Evalue=5e-81,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007343 [H]

Pfam domain/function: PF04228 Zn_peptidase [H]

EC number: NA

Molecular weight: Translated: 33196; Mature: 33196

Theoretical pI: Translated: 5.34; Mature: 5.34

Prosite motif: PS00142 ZINC_PROTEASE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRWQGRRQSDNVEDLRGEQGGGVGGGFGRGGGFGGPGFRIVRGGGISGILILVVMFFVLR
CCCCCCCCCCCHHHHCCCCCCCCCCCCCCCCCCCCCCEEEEECCCHHHHHHHHHHHHHHH
AVGIDPMPILFGDGSMSPTVQTQGTGRTVAEGGTVANDETTQFARTVLAETEDVWSGIFQ
HHCCCCCEEEEECCCCCCCEEECCCCCEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH
SRGQTYTPPTMVLFSDQVRSACGYASAASGPFYCPGDRKLYIDLSFYKELANRFGASGDF
HCCCCCCCCEEEEECHHHHHHHCCCCCCCCCEECCCCCEEEEEHHHHHHHHHHCCCCCCH
AQAYVLAHEVGHHVQNLLGILPKFNQMRQQMSEAQANQMSVRVELQADCLAGVWGHYTDQ
HHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHEEEEEEECHHHHHHHHHCCCCC
KGILEAGDLEEALNAAHQIGDDTLQRRSQGYVVPESFNHGTSAQRAKWFQRGFDSGQLGS
CCCCCCCCHHHHHHHHHHCCHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCC
CDTFSGDV
CCCCCCCC
>Mature Secondary Structure
MRWQGRRQSDNVEDLRGEQGGGVGGGFGRGGGFGGPGFRIVRGGGISGILILVVMFFVLR
CCCCCCCCCCCHHHHCCCCCCCCCCCCCCCCCCCCCCEEEEECCCHHHHHHHHHHHHHHH
AVGIDPMPILFGDGSMSPTVQTQGTGRTVAEGGTVANDETTQFARTVLAETEDVWSGIFQ
HHCCCCCEEEEECCCCCCCEEECCCCCEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH
SRGQTYTPPTMVLFSDQVRSACGYASAASGPFYCPGDRKLYIDLSFYKELANRFGASGDF
HCCCCCCCCEEEEECHHHHHHHCCCCCCCCCEECCCCCEEEEEHHHHHHHHHHCCCCCCH
AQAYVLAHEVGHHVQNLLGILPKFNQMRQQMSEAQANQMSVRVELQADCLAGVWGHYTDQ
HHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHEEEEEEECHHHHHHHHHCCCCC
KGILEAGDLEEALNAAHQIGDDTLQRRSQGYVVPESFNHGTSAQRAKWFQRGFDSGQLGS
CCCCCCCCHHHHHHHHHHCCHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCC
CDTFSGDV
CCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]