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The map label for this gene is ycgJ [H]

Identifier: 23502320

GI number: 23502320

Start: 1409745

End: 1410770

Strand: Reverse

Name: ycgJ [H]

Synonym: BR1451

Alternate gene names: 23502320

Gene position: 1410770-1409745 (Counterclockwise)

Preceding gene: 23502322

Following gene: 23502319

Centisome position: 66.93

GC content: 59.94

Gene sequence:

>1026_bases
ATGACCGGATTGCGGTTGCAGCTTGATCGAATGGTGAATGTGCTTAAAGCGGTGGCGGAACCGAGCCGCCTGCGCATCCT
AGCGCTTCTGGCCCGTGGAGACCTGACGGTTTCGGATCTCACCATCATTCTCGGCCAGTCGCAGCCGCGTGTTTCCCGCC
ATCTGAAGCTTCTGGCGGAAGCGGATCTGATCGATCGTTATCAAGAAGGGGCCTGGGCCTATTTCCGACTGGCCGACAAT
GCGATCAGCGGTGAGGTTGCCCGTGGGCTTCTTGCCCGGCTCGACAATGCAGACGCCTTGATCGAGCGCGATATGGAGCG
GCTTTCACAGGTCAAATCCAGCCGCCAGGAAAAGGCGGCGGCCTATTTCAGCGCCAATGCTGGAAGCTGGGATGAAATCC
GCAAGCTGCATGTTTCCGAAACTGCCGTGGAAACCGCGCTGCGGAAGGCCGTCGGCGAAAAGCCGTTTCAGGCAATGCTT
GATGTGGGAACCGGCACGGGGCGGCTTCTGGAGCTTTTCGCGCCGCTTTATCTGCGTGGTGTGGGGATCGATATCAACCG
CGACATGCTTGCCGTGGCACGCGCCAATCTCGATCTTGCGGCCATTGGCAATGCGCAGGTCCGTCAGGGCGATGTCTATG
CCTTGCCGGTTGAACGCGAGAGCTTCGATCTGGTGACGATCCATCAGGTCCTGCATTTTCTTGACGATCCGCTTGCCGCC
ATACGTGAGGCTGCGCGGGCATTGCGCCCGAACGGGCGCCTGCTGGTCGTCGATTTTGCGCCGCACAAGCTGGAATTCCT
GCGGGAAGAACATGCGCATCTGCAGCTTGGCTTCAGCGATGAACAGATGCTGGGCTGGATGCGGGATGCCGGGCTTGAGC
CTGAAAAGACACTGGAGCTGGAGCCGAAGGCGGCCAATGGAGAGGAGGGCCTGACGGTCAAGCTGTGGCTTGCCCGCGAT
CCGCGCCTTCTCATCGCCGATCCGGTTTCGCATGGCTCCCAAAAGTGGCAACCGGTTTTGGGATAA

Upstream 100 bases:

>100_bases
TCCTTGCGCGAATCCCTGATCGCTCCATTTTGCATCAAAATCGCTTGCGCTGAAATTCTTTTCCATATAAACATATCTTT
ATATGTTTAGAGGTAAAGAT

Downstream 100 bases:

>100_bases
AGACATGCGGCAAAAACAGACAATAAGCATGACGGAGACAGTTTGATGGGTTTTTATGGTCTTTCCCGCCGGCCGGATGT
CGGCCAGACCACCCGGGTAT

Product: ArsR family transcriptional regulator

Products: S-Adenosyl-L-Homocysteine; @OCTA02.txt*2- Polyprenyl-3-Methyl-6-Methoxy-1,4-Benzoquinol!; Menaquinol. [C]

Alternate protein names: NA

Number of amino acids: Translated: 341; Mature: 340

Protein sequence:

>341_residues
MTGLRLQLDRMVNVLKAVAEPSRLRILALLARGDLTVSDLTIILGQSQPRVSRHLKLLAEADLIDRYQEGAWAYFRLADN
AISGEVARGLLARLDNADALIERDMERLSQVKSSRQEKAAAYFSANAGSWDEIRKLHVSETAVETALRKAVGEKPFQAML
DVGTGTGRLLELFAPLYLRGVGIDINRDMLAVARANLDLAAIGNAQVRQGDVYALPVERESFDLVTIHQVLHFLDDPLAA
IREAARALRPNGRLLVVDFAPHKLEFLREEHAHLQLGFSDEQMLGWMRDAGLEPEKTLELEPKAANGEEGLTVKLWLARD
PRLLIADPVSHGSQKWQPVLG

Sequences:

>Translated_341_residues
MTGLRLQLDRMVNVLKAVAEPSRLRILALLARGDLTVSDLTIILGQSQPRVSRHLKLLAEADLIDRYQEGAWAYFRLADN
AISGEVARGLLARLDNADALIERDMERLSQVKSSRQEKAAAYFSANAGSWDEIRKLHVSETAVETALRKAVGEKPFQAML
DVGTGTGRLLELFAPLYLRGVGIDINRDMLAVARANLDLAAIGNAQVRQGDVYALPVERESFDLVTIHQVLHFLDDPLAA
IREAARALRPNGRLLVVDFAPHKLEFLREEHAHLQLGFSDEQMLGWMRDAGLEPEKTLELEPKAANGEEGLTVKLWLARD
PRLLIADPVSHGSQKWQPVLG
>Mature_340_residues
TGLRLQLDRMVNVLKAVAEPSRLRILALLARGDLTVSDLTIILGQSQPRVSRHLKLLAEADLIDRYQEGAWAYFRLADNA
ISGEVARGLLARLDNADALIERDMERLSQVKSSRQEKAAAYFSANAGSWDEIRKLHVSETAVETALRKAVGEKPFQAMLD
VGTGTGRLLELFAPLYLRGVGIDINRDMLAVARANLDLAAIGNAQVRQGDVYALPVERESFDLVTIHQVLHFLDDPLAAI
REAARALRPNGRLLVVDFAPHKLEFLREEHAHLQLGFSDEQMLGWMRDAGLEPEKTLELEPKAANGEEGLTVKLWLARDP
RLLIADPVSHGSQKWQPVLG

Specific function: Methyltransferase Required For The Conversion Of Dimethylmenaquinone (Dmkh2) To Menaquinone (Mkh2) And The Conversion Of 2-Polyprenyl-6-Methoxy-1,4-Benzoquinol (Ddmqh2) To 2-Polyprenyl-3-Methyl-6-Methoxy-1,4-Benzoquinol (Dmqh2). [C]

COG id: COG0500

COG function: function code QR; SAM-dependent methyltransferases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the methyltransferase superfamily [H]

Homologues:

Organism=Escherichia coli, GI48994983, Length=119, Percent_Identity=36.1344537815126, Blast_Score=65, Evalue=8e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013216 [H]

Pfam domain/function: PF08241 Methyltransf_11 [H]

EC number: 2.1.1.- [C]

Molecular weight: Translated: 37835; Mature: 37704

Theoretical pI: Translated: 6.12; Mature: 6.12

Prosite motif: PS50987 HTH_ARSR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTGLRLQLDRMVNVLKAVAEPSRLRILALLARGDLTVSDLTIILGQSQPRVSRHLKLLAE
CCCCCHHHHHHHHHHHHHCCCCHHEEEEEEECCCCCHHHEEEEECCCCHHHHHHHHHHHH
ADLIDRYQEGAWAYFRLADNAISGEVARGLLARLDNADALIERDMERLSQVKSSRQEKAA
HHHHHHHHCCCEEEEEECCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHH
AYFSANAGSWDEIRKLHVSETAVETALRKAVGEKPFQAMLDVGTGTGRLLELFAPLYLRG
HEEECCCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCCCCHHHHHHHHHHHHEE
VGIDINRDMLAVARANLDLAAIGNAQVRQGDVYALPVERESFDLVTIHQVLHFLDDPLAA
CCCCCCCCHHHHHHCCCCEEECCCCEEECCCEEEEECCCCCCCHHHHHHHHHHHCCHHHH
IREAARALRPNGRLLVVDFAPHKLEFLREEHAHLQLGFSDEQMLGWMRDAGLEPEKTLEL
HHHHHHHHCCCCCEEEEECCCHHHHHHHHCCCEEEECCCHHHHHHHHHHCCCCCCCCEEE
EPKAANGEEGLTVKLWLARDPRLLIADPVSHGSQKWQPVLG
CCCCCCCCCCCEEEEEECCCCCEEEECCCCCCCCCCCCCCC
>Mature Secondary Structure 
TGLRLQLDRMVNVLKAVAEPSRLRILALLARGDLTVSDLTIILGQSQPRVSRHLKLLAE
CCCCHHHHHHHHHHHHHCCCCHHEEEEEEECCCCCHHHEEEEECCCCHHHHHHHHHHHH
ADLIDRYQEGAWAYFRLADNAISGEVARGLLARLDNADALIERDMERLSQVKSSRQEKAA
HHHHHHHHCCCEEEEEECCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHH
AYFSANAGSWDEIRKLHVSETAVETALRKAVGEKPFQAMLDVGTGTGRLLELFAPLYLRG
HEEECCCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCCCCHHHHHHHHHHHHEE
VGIDINRDMLAVARANLDLAAIGNAQVRQGDVYALPVERESFDLVTIHQVLHFLDDPLAA
CCCCCCCCHHHHHHCCCCEEECCCCEEECCCEEEEECCCCCCCHHHHHHHHHHHCCHHHH
IREAARALRPNGRLLVVDFAPHKLEFLREEHAHLQLGFSDEQMLGWMRDAGLEPEKTLEL
HHHHHHHHCCCCCEEEEECCCHHHHHHHHCCCEEEECCCHHHHHHHHHHCCCCCCCCEEE
EPKAANGEEGLTVKLWLARDPRLLIADPVSHGSQKWQPVLG
CCCCCCCCCCCEEEEEECCCCCEEEECCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: S-Adenosyl-L-Methionine; 2-Polyprenyl-6- Methoxy-1,4-Benzoquinol; Demethylmenaquinol [C]

Specific reaction: S-Adenosyl-L-Methionine + @OCTA02.txt*2-Polyprenyl-6- Methoxy-1,4-Benzoquinol! = S-Adenosyl-L-Homocysteine + 2- Polyprenyl-3-Methyl-6-Methoxy -1,4-Benzoquinol S-Adenosyl-L-Methionine + Demethylmenaquinol = S-Adenosyl-L-Homocysteine + Menaquinol. [C]

General reaction: Transferring one-carbon groups; Methyltransferases [C]

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]