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The map label for this gene is yddE [C]

Identifier: 23502246

GI number: 23502246

Start: 1330364

End: 1331290

Strand: Reverse

Name: yddE [C]

Synonym: BR1374

Alternate gene names: 23502246

Gene position: 1331290-1330364 (Counterclockwise)

Preceding gene: 23502247

Following gene: 23502244

Centisome position: 63.16

GC content: 57.93

Gene sequence:

>927_bases
ATGAAGAAAGCCGCTGTTTCCGGCCGTCTTTATGAGGTTTTCGACGTTTTCGCCGATAAGGCCCTGGCAGGAAACCCATT
GGCTATCGTCCATGATTGCGAGGGGCTGACTGACGCATGTATGCAGGCCATCGCGCGGGAGTTCAACCTTTCGGAAACGG
TGTTCATCCATGCGCCGGCCAATCCCGCCCATGAGGCGTCGGTGCGCATCTTCACTCCTGCTTATGAGTTGCCCTTTGCC
GGGCATCCGACCGTGGGCGCTGCGGTTTCACTGGCTCGCCGCCAGAAAACAGGCGATGAAACCGACAGGCTTGTGACGCT
GGAGGAAAAGGTCGGGATTGTCCGCTGCGGCGTGATCCTGGGCGAGAACAGCGCCTTTGCCGAATTTGACCTACCGCGCC
TGCCGGAACAAGTGGATGTGAAGATCGAGCGCGAGGAGGCTGCTGCGGCTATTGGCCTTGGGACACATGAGATCGGTTTT
GAGAATCACGTTCCGGGAGTGTGGAGTGCGGGTACGCCCTGTCTGCTGGTGCCGGTTCACAATCTGATCGCCGCCGCCAA
GGTTTCCATTGACCCGGTCTATGTCAGCGAAAGCCTGCCCCATGTGGGTGGCAGGCCTTTGCCCATCTATGTCTATTGTC
GCGAAACCATCCTTTTCGACAGCCATTTCCACGCGCGCATGTTTGTGATCGGCGCAAATGTCTATGAAGATCCCGCGACG
GGTTCGGCTGTTGCCGCCTTTGCCGGAATGATCCAGCAGAACGACAAGCCGGTTGATGGCAGTTCACAATGGTGGATCGA
ACAGGGCATGGAAATGGGCCGCCCTTCCCGCATCCGTCTTGAGCTGGATGTGTCGAAACAAAAACTCGTCAGTGCCCGTA
TCGGCGGCACGGCCGTGAAAATTGCCGAGGGCAGGCTTTTTGTCTGA

Upstream 100 bases:

>100_bases
GGCACGAAATTGGCTATGCTTGCAACCGCACGCAGCATGGCATGTTGGCAAGGAAACCATTTCATATTGGTTTTCAATGC
ATGTCAAAGGAGGATGAGGG

Downstream 100 bases:

>100_bases
GCAAAGTTTGGCTTAGAGCATTTCCAGCAAAAGTGCGAAGCGGTTTTGCGTCGGATAATGCGAAAAAACAAAGAGATAGA
GCGGTTCTGGCGATTCCGTT

Product: PhzF family phenazine biosynthesis protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 308; Mature: 308

Protein sequence:

>308_residues
MKKAAVSGRLYEVFDVFADKALAGNPLAIVHDCEGLTDACMQAIAREFNLSETVFIHAPANPAHEASVRIFTPAYELPFA
GHPTVGAAVSLARRQKTGDETDRLVTLEEKVGIVRCGVILGENSAFAEFDLPRLPEQVDVKIEREEAAAAIGLGTHEIGF
ENHVPGVWSAGTPCLLVPVHNLIAAAKVSIDPVYVSESLPHVGGRPLPIYVYCRETILFDSHFHARMFVIGANVYEDPAT
GSAVAAFAGMIQQNDKPVDGSSQWWIEQGMEMGRPSRIRLELDVSKQKLVSARIGGTAVKIAEGRLFV

Sequences:

>Translated_308_residues
MKKAAVSGRLYEVFDVFADKALAGNPLAIVHDCEGLTDACMQAIAREFNLSETVFIHAPANPAHEASVRIFTPAYELPFA
GHPTVGAAVSLARRQKTGDETDRLVTLEEKVGIVRCGVILGENSAFAEFDLPRLPEQVDVKIEREEAAAAIGLGTHEIGF
ENHVPGVWSAGTPCLLVPVHNLIAAAKVSIDPVYVSESLPHVGGRPLPIYVYCRETILFDSHFHARMFVIGANVYEDPAT
GSAVAAFAGMIQQNDKPVDGSSQWWIEQGMEMGRPSRIRLELDVSKQKLVSARIGGTAVKIAEGRLFV
>Mature_308_residues
MKKAAVSGRLYEVFDVFADKALAGNPLAIVHDCEGLTDACMQAIAREFNLSETVFIHAPANPAHEASVRIFTPAYELPFA
GHPTVGAAVSLARRQKTGDETDRLVTLEEKVGIVRCGVILGENSAFAEFDLPRLPEQVDVKIEREEAAAAIGLGTHEIGF
ENHVPGVWSAGTPCLLVPVHNLIAAAKVSIDPVYVSESLPHVGGRPLPIYVYCRETILFDSHFHARMFVIGANVYEDPAT
GSAVAAFAGMIQQNDKPVDGSSQWWIEQGMEMGRPSRIRLELDVSKQKLVSARIGGTAVKIAEGRLFV

Specific function: Unknown

COG id: COG0384

COG function: function code R; Predicted epimerase, PhzC/PhzF homolog

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the phzF family [H]

Homologues:

Organism=Saccharomyces cerevisiae, GI6321818, Length=307, Percent_Identity=26.0586319218241, Blast_Score=87, Evalue=4e-18,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003719 [H]

Pfam domain/function: PF02567 PhzC-PhzF [H]

EC number: NA

Molecular weight: Translated: 33311; Mature: 33311

Theoretical pI: Translated: 5.58; Mature: 5.58

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKAAVSGRLYEVFDVFADKALAGNPLAIVHDCEGLTDACMQAIAREFNLSETVFIHAPA
CCCCCCCCHHHHHHHHHHHHHCCCCCEEEEECCCCHHHHHHHHHHHHCCCCCEEEEECCC
NPAHEASVRIFTPAYELPFAGHPTVGAAVSLARRQKTGDETDRLVTLEEKVGIVRCGVIL
CCCCCCEEEEEECCCCCCCCCCCCHHHHHHHHHHHCCCCCCCEEEEEHHHCCEEEEEEEE
GENSAFAEFDLPRLPEQVDVKIEREEAAAAIGLGTHEIGFENHVPGVWSAGTPCLLVPVH
CCCCCEEECCCCCCCHHHCEEEECCHHHEEEECCCCCCCCCCCCCCCCCCCCCEEEEEHH
NLIAAAKVSIDPVYVSESLPHVGGRPLPIYVYCRETILFDSHFHARMFVIGANVYEDPAT
HHHHHHHEECCEEEECCCCCCCCCCCCEEEEEEEEEEEECCCCCEEEEEEECCCCCCCCC
GSAVAAFAGMIQQNDKPVDGSSQWWIEQGMEMGRPSRIRLELDVSKQKLVSARIGGTAVK
CHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHCCCCCEEEEEEECCHHHHHHHHCCCEEEE
IAEGRLFV
EECCEECC
>Mature Secondary Structure
MKKAAVSGRLYEVFDVFADKALAGNPLAIVHDCEGLTDACMQAIAREFNLSETVFIHAPA
CCCCCCCCHHHHHHHHHHHHHCCCCCEEEEECCCCHHHHHHHHHHHHCCCCCEEEEECCC
NPAHEASVRIFTPAYELPFAGHPTVGAAVSLARRQKTGDETDRLVTLEEKVGIVRCGVIL
CCCCCCEEEEEECCCCCCCCCCCCHHHHHHHHHHHCCCCCCCEEEEEHHHCCEEEEEEEE
GENSAFAEFDLPRLPEQVDVKIEREEAAAAIGLGTHEIGFENHVPGVWSAGTPCLLVPVH
CCCCCEEECCCCCCCHHHCEEEECCHHHEEEECCCCCCCCCCCCCCCCCCCCCEEEEEHH
NLIAAAKVSIDPVYVSESLPHVGGRPLPIYVYCRETILFDSHFHARMFVIGANVYEDPAT
HHHHHHHEECCEEEECCCCCCCCCCCCEEEEEEEEEEEECCCCCEEEEEEECCCCCCCCC
GSAVAAFAGMIQQNDKPVDGSSQWWIEQGMEMGRPSRIRLELDVSKQKLVSARIGGTAVK
CHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHCCCCCEEEEEEECCHHHHHHHHCCCEEEE
IAEGRLFV
EECCEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11214968 [H]