| Definition | Brucella suis 1330 chromosome chromosome I, complete sequence. |
|---|---|
| Accession | NC_004310 |
| Length | 2,107,794 |
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The map label for this gene is yhiI [H]
Identifier: 23502223
GI number: 23502223
Start: 1313284
End: 1314351
Strand: Reverse
Name: yhiI [H]
Synonym: BR1351
Alternate gene names: 23502223
Gene position: 1314351-1313284 (Counterclockwise)
Preceding gene: 23502225
Following gene: 23502222
Centisome position: 62.36
GC content: 60.96
Gene sequence:
>1068_bases ATGGGTTTCAGCCGCAAACAATGGATCGTTGCAGGCGCAATTGTCGTTCTCGCTGCGGGCGGCTATTATGCCTTGCAGGC GATGAATGGCAGCGGGCTGCCGGACGGGATTGCCAGCGGCAATGGCCGCGTCGAGGCGGTTGAAATCGATATTTCCACGA AAAGCCCCGGCCGCATCCGTGAAATTTTTGCAAATGAAGGCAGTTTCGTCAAAGCGGGCGATGTTCTGGCCCGCATGGAC ACGGACCAGCTTGAAAGCCAGTACCGGCAGGCGAAGGCACAATTGCGCCGGGCGGAAATCGGTATCGATACGGCACAAAG CCTTGTGACGCAGCGGCAGGCAGAACATGCGGCGGCCGAAGCGACCGTTGCCCAGCGGGAAGCCCAGCTTGATGCAGCAC AGCGCCGTCTGGCCCGTTCCCGGCAATTGTCGGAATCGCGGACTGTCTCGCAGCAGGTTCTGGATGACGATCGCGCAACC GCGCAAGGCGCGGAAGCCGCCGTCGGTGCGGCCAAGGCGCAGCTTGCAGCAACGGACGCGGCCATAGGTGCCGCCAAGGC GCAGGTTGTGGATGCGCAAGCCTCTGTCGAAGCTGCCAAGGCCGCTATTGCCGCCATTGAGGCGGATTTGAGGGACGCAA CCTTGACCGCGCCCAAGCCGGGCCGTGTGCAATATCGTGTGGCACAGCCCGGCGAAGTGCTTTCAGCAGGCGGGCGCGTG CTTAATCTGGTGGACCTCAGCGATGTTTCCATGACCTTCTTCCTGCCCACGGCGCAGGCGGGGCGCGTGGCAATCGGAGC CGATGCCCGCATCGTTCTCGATGCTGCGCCGCAATATGTCATCCCGGCCAAGGTCAGCTTCGTGGCCGATGTCGCCCAGT TCACGCCGAAAACGGTCGAGACCAAGGAAGAGCGCCAGAAGCTGATGTTCCGCGTCAAGGCAAAGATTCCGCAGAACCTT TTACAGAAATATATTCAGCAGGTGAAAACCGGCTTGCCCGGCGTTGCCTATGTCAAGCTTGCCCCTGATGCCGGATGGCC GAAGAACCTTGCGGAAACCGTAAAATGA
Upstream 100 bases:
>100_bases AAACCGGGCGGGGAGGCGAACATCCCGACAGATAGCGACCGCTTGCCCATGCTTCACCGGAAGCTGGCCTTGGACGAATA TTGGCAAAGGATGTTTCATT
Downstream 100 bases:
>100_bases GCAGCGTTTTCGGCAAGGCTGGCGACGGCGGCTTTGTCGTCAGGGCGCGGGGCGTGGATTTGTCCTATGGCGCAACGCGC GCCTTGCGCAATGTCGATCT
Product: HlyD family secretion protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 355; Mature: 354
Protein sequence:
>355_residues MGFSRKQWIVAGAIVVLAAGGYYALQAMNGSGLPDGIASGNGRVEAVEIDISTKSPGRIREIFANEGSFVKAGDVLARMD TDQLESQYRQAKAQLRRAEIGIDTAQSLVTQRQAEHAAAEATVAQREAQLDAAQRRLARSRQLSESRTVSQQVLDDDRAT AQGAEAAVGAAKAQLAATDAAIGAAKAQVVDAQASVEAAKAAIAAIEADLRDATLTAPKPGRVQYRVAQPGEVLSAGGRV LNLVDLSDVSMTFFLPTAQAGRVAIGADARIVLDAAPQYVIPAKVSFVADVAQFTPKTVETKEERQKLMFRVKAKIPQNL LQKYIQQVKTGLPGVAYVKLAPDAGWPKNLAETVK
Sequences:
>Translated_355_residues MGFSRKQWIVAGAIVVLAAGGYYALQAMNGSGLPDGIASGNGRVEAVEIDISTKSPGRIREIFANEGSFVKAGDVLARMD TDQLESQYRQAKAQLRRAEIGIDTAQSLVTQRQAEHAAAEATVAQREAQLDAAQRRLARSRQLSESRTVSQQVLDDDRAT AQGAEAAVGAAKAQLAATDAAIGAAKAQVVDAQASVEAAKAAIAAIEADLRDATLTAPKPGRVQYRVAQPGEVLSAGGRV LNLVDLSDVSMTFFLPTAQAGRVAIGADARIVLDAAPQYVIPAKVSFVADVAQFTPKTVETKEERQKLMFRVKAKIPQNL LQKYIQQVKTGLPGVAYVKLAPDAGWPKNLAETVK >Mature_354_residues GFSRKQWIVAGAIVVLAAGGYYALQAMNGSGLPDGIASGNGRVEAVEIDISTKSPGRIREIFANEGSFVKAGDVLARMDT DQLESQYRQAKAQLRRAEIGIDTAQSLVTQRQAEHAAAEATVAQREAQLDAAQRRLARSRQLSESRTVSQQVLDDDRATA QGAEAAVGAAKAQLAATDAAIGAAKAQVVDAQASVEAAKAAIAAIEADLRDATLTAPKPGRVQYRVAQPGEVLSAGGRVL NLVDLSDVSMTFFLPTAQAGRVAIGADARIVLDAAPQYVIPAKVSFVADVAQFTPKTVETKEERQKLMFRVKAKIPQNLL QKYIQQVKTGLPGVAYVKLAPDAGWPKNLAETVK
Specific function: Unknown
COG id: COG0845
COG function: function code M; Membrane-fusion protein
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI1789900, Length=343, Percent_Identity=54.2274052478134, Blast_Score=344, Evalue=6e-96, Organism=Escherichia coli, GI1787013, Length=292, Percent_Identity=30.8219178082192, Blast_Score=101, Evalue=6e-23,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003997 - InterPro: IPR006143 [H]
Pfam domain/function: PF00529 HlyD [H]
EC number: NA
Molecular weight: Translated: 37572; Mature: 37441
Theoretical pI: Translated: 9.79; Mature: 9.79
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 1.4 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 1.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGFSRKQWIVAGAIVVLAAGGYYALQAMNGSGLPDGIASGNGRVEAVEIDISTKSPGRIR CCCCCCHHHHHHEEHHHCCCCEEEEEECCCCCCCCCCCCCCCEEEEEEEEECCCCCHHHH EIFANEGSFVKAGDVLARMDTDQLESQYRQAKAQLRRAEIGIDTAQSLVTQRQAEHAAAE HHHCCCCCEEECCHHHHHCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHH ATVAQREAQLDAAQRRLARSRQLSESRTVSQQVLDDDRATAQGAEAAVGAAKAQLAATDA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCHHHHHHHHHHHHHHHHH AIGAAKAQVVDAQASVEAAKAAIAAIEADLRDATLTAPKPGRVQYRVAQPGEVLSAGGRV HHHHHHHHEECHHHHHHHHHHHHHHHHHCCCCCEECCCCCCCEEEEECCCCHHHHCCCCE LNLVDLSDVSMTFFLPTAQAGRVAIGADARIVLDAAPQYVIPAKVSFVADVAQFTPKTVE EEEEECCCCEEEEEECCCCCCCEEECCCCEEEEECCCCEEECCHHHHHHHHHHHCCCCCC TKEERQKLMFRVKAKIPQNLLQKYIQQVKTGLPGVAYVKLAPDAGWPKNLAETVK CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCHHHHHHCC >Mature Secondary Structure GFSRKQWIVAGAIVVLAAGGYYALQAMNGSGLPDGIASGNGRVEAVEIDISTKSPGRIR CCCCCHHHHHHEEHHHCCCCEEEEEECCCCCCCCCCCCCCCEEEEEEEEECCCCCHHHH EIFANEGSFVKAGDVLARMDTDQLESQYRQAKAQLRRAEIGIDTAQSLVTQRQAEHAAAE HHHCCCCCEEECCHHHHHCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHH ATVAQREAQLDAAQRRLARSRQLSESRTVSQQVLDDDRATAQGAEAAVGAAKAQLAATDA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCHHHHHHHHHHHHHHHHH AIGAAKAQVVDAQASVEAAKAAIAAIEADLRDATLTAPKPGRVQYRVAQPGEVLSAGGRV HHHHHHHHEECHHHHHHHHHHHHHHHHHCCCCCEECCCCCCCEEEEECCCCHHHHCCCCE LNLVDLSDVSMTFFLPTAQAGRVAIGADARIVLDAAPQYVIPAKVSFVADVAQFTPKTVE EEEEECCCCEEEEEECCCCCCCEEECCCCEEEEECCCCEEECCHHHHHHHHHHHCCCCCC TKEERQKLMFRVKAKIPQNLLQKYIQQVKTGLPGVAYVKLAPDAGWPKNLAETVK CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8041620; 9278503 [H]