| Definition | Brucella suis 1330 chromosome chromosome I, complete sequence. |
|---|---|
| Accession | NC_004310 |
| Length | 2,107,794 |
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The map label for this gene is 23501509
Identifier: 23501509
GI number: 23501509
Start: 620335
End: 621303
Strand: Reverse
Name: 23501509
Synonym: BR0622
Alternate gene names: NA
Gene position: 621303-620335 (Counterclockwise)
Preceding gene: 23501510
Following gene: 23501507
Centisome position: 29.48
GC content: 59.55
Gene sequence:
>969_bases ATGTCAAAAAGCCGCCTGAACCTGCCCTTCCTGATACTTGTCGCCGCCACGCTGGTTTCGATCCCGCTTGTGCTGAGCTT CCTGAACAGCCTTCACCCGGCGTTCGACACCTTCTCACATTTACGCATCCATCTGGCCGTGCTGATGGGGTTGCTGGCGC TGCCGCTGCTTTTCACGAAACTGCGGCGCGAAGGCGCGATGATCCTGTTGCTCGCCGTTTTTGCAATTGCCGTCACGCCC CATGTTTTCCCCGCAAGTGAAGATGCCCATGCGGGCGAAGCAGCACAGCCTCACTATCGCCTTTTGCAAATGAACCTTCG CTTCGACAATGGTTCACCGGAGCAGGCACTCTCCCTCATAGCCCATATCCGCCCCGATGTCGTCACCCTGGAAGAAGTAT CAGCCATGTGGCGGGAGAAGTTCGGCCATATTGCATCCGCCTATCCCTACAGCATTTTCTGCCCTCATCCCGGCGCGGTT TTCGGGGTGGCAATCCTGTCGCGCCGGCCCTTCATCGCTGACAGCACCCCCGCCTGCGATCCGAAAGGCATGATGGCCGT CGCCTCGGTCGATTTCGGTGGCCGTCCCGTGGATGTGGCCGCACTGCATCTCCATTGGCCTTGGCCTTTTCAGCAGAGCG AGCAGATCGAGGCCCTTTCGGTGCAGTTTCGCGGACTGTCGGAAAATGCAATCCTGAGCGGCGATCTGAACGCAACACCA TGGAGCGCGACTACAAAGCGCATCGCCGAACTCGCTGCGATGACACCTGCCCCGCCGACCGGCCCAACATGGCTTTATCG TCGCCTGCCCGCTTCGTTGCGCTTCGCCGGATTGCCTATCGACCAGACCTTCGCGAAAGGCCGGGTCGCGATATCGAAGA TTACCCGGCAACAGCCCATCGGCTCTGACCATCTGCCCGTCCTTGTGGAATTTTCCATCATTCCCCAGCCGGAGACAGTC GCGTCGTAA
Upstream 100 bases:
>100_bases GCCGTGCCGGAAACAGGGGGGCTCAGACAACCAGAAACCTATTCCCCTATTCCCCTACCCCATTCATTTTCTCGCCGTAA TCCGGCACTACTGCCGCCTC
Downstream 100 bases:
>100_bases CAAATAAGGCGGCATAGAAGCCGCCTTATTCAGTCAAATTACAATTCTCGTTCCGGTCCTTCGCCGACATCTTCCCAGCG GCGGTCGAGACGGACACGGT
Product: AP endonuclease domain-containing protein
Products: NA
Alternate protein names: Endonuclease/Exonuclease/Phosphatase Family Protein; Transmembrane Exo/Endo Phosphatase Protein
Number of amino acids: Translated: 322; Mature: 321
Protein sequence:
>322_residues MSKSRLNLPFLILVAATLVSIPLVLSFLNSLHPAFDTFSHLRIHLAVLMGLLALPLLFTKLRREGAMILLLAVFAIAVTP HVFPASEDAHAGEAAQPHYRLLQMNLRFDNGSPEQALSLIAHIRPDVVTLEEVSAMWREKFGHIASAYPYSIFCPHPGAV FGVAILSRRPFIADSTPACDPKGMMAVASVDFGGRPVDVAALHLHWPWPFQQSEQIEALSVQFRGLSENAILSGDLNATP WSATTKRIAELAAMTPAPPTGPTWLYRRLPASLRFAGLPIDQTFAKGRVAISKITRQQPIGSDHLPVLVEFSIIPQPETV AS
Sequences:
>Translated_322_residues MSKSRLNLPFLILVAATLVSIPLVLSFLNSLHPAFDTFSHLRIHLAVLMGLLALPLLFTKLRREGAMILLLAVFAIAVTP HVFPASEDAHAGEAAQPHYRLLQMNLRFDNGSPEQALSLIAHIRPDVVTLEEVSAMWREKFGHIASAYPYSIFCPHPGAV FGVAILSRRPFIADSTPACDPKGMMAVASVDFGGRPVDVAALHLHWPWPFQQSEQIEALSVQFRGLSENAILSGDLNATP WSATTKRIAELAAMTPAPPTGPTWLYRRLPASLRFAGLPIDQTFAKGRVAISKITRQQPIGSDHLPVLVEFSIIPQPETV AS >Mature_321_residues SKSRLNLPFLILVAATLVSIPLVLSFLNSLHPAFDTFSHLRIHLAVLMGLLALPLLFTKLRREGAMILLLAVFAIAVTPH VFPASEDAHAGEAAQPHYRLLQMNLRFDNGSPEQALSLIAHIRPDVVTLEEVSAMWREKFGHIASAYPYSIFCPHPGAVF GVAILSRRPFIADSTPACDPKGMMAVASVDFGGRPVDVAALHLHWPWPFQQSEQIEALSVQFRGLSENAILSGDLNATPW SATTKRIAELAAMTPAPPTGPTWLYRRLPASLRFAGLPIDQTFAKGRVAISKITRQQPIGSDHLPVLVEFSIIPQPETVA S
Specific function: Unknown
COG id: COG3021
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 35150; Mature: 35019
Theoretical pI: Translated: 8.30; Mature: 8.30
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSKSRLNLPFLILVAATLVSIPLVLSFLNSLHPAFDTFSHLRIHLAVLMGLLALPLLFTK CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHH LRREGAMILLLAVFAIAVTPHVFPASEDAHAGEAAQPHYRLLQMNLRFDNGSPEQALSLI HHHCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCEEEEEEEEEECCCCHHHHHHHH AHIRPDVVTLEEVSAMWREKFGHIASAYPYSIFCPHPGAVFGVAILSRRPFIADSTPACD HHCCCCEEEHHHHHHHHHHHHCCHHHCCCCEEECCCCCHHHHHHHHHCCCCCCCCCCCCC PKGMMAVASVDFGGRPVDVAALHLHWPWPFQQSEQIEALSVQFRGLSENAILSGDLNATP CCCCEEEEEECCCCCCEEEEEEEEECCCCCCCCCCHHEEEEEECCCCCCCEEECCCCCCC WSATTKRIAELAAMTPAPPTGPTWLYRRLPASLRFAGLPIDQTFAKGRVAISKITRQQPI CHHHHHHHHHHHHCCCCCCCCHHHHHHHCCCHHEEECCCCHHHHHHHHHHHHHHHHHCCC GSDHLPVLVEFSIIPQPETVAS CCCCCCEEEEEEECCCCHHCCC >Mature Secondary Structure SKSRLNLPFLILVAATLVSIPLVLSFLNSLHPAFDTFSHLRIHLAVLMGLLALPLLFTK CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHH LRREGAMILLLAVFAIAVTPHVFPASEDAHAGEAAQPHYRLLQMNLRFDNGSPEQALSLI HHHCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCEEEEEEEEEECCCCHHHHHHHH AHIRPDVVTLEEVSAMWREKFGHIASAYPYSIFCPHPGAVFGVAILSRRPFIADSTPACD HHCCCCEEEHHHHHHHHHHHHCCHHHCCCCEEECCCCCHHHHHHHHHCCCCCCCCCCCCC PKGMMAVASVDFGGRPVDVAALHLHWPWPFQQSEQIEALSVQFRGLSENAILSGDLNATP CCCCEEEEEECCCCCCEEEEEEEEECCCCCCCCCCHHEEEEEECCCCCCCEEECCCCCCC WSATTKRIAELAAMTPAPPTGPTWLYRRLPASLRFAGLPIDQTFAKGRVAISKITRQQPI CHHHHHHHHHHHHCCCCCCCCHHHHHHHCCCHHEEECCCCHHHHHHHHHHHHHHHHHCCC GSDHLPVLVEFSIIPQPETVAS CCCCCCEEEEEEECCCCHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA