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The map label for this gene is ynfJ [C]

Identifier: 23501391

GI number: 23501391

Start: 488299

End: 490089

Strand: Reverse

Name: ynfJ [C]

Synonym: BR0490

Alternate gene names: 23501391

Gene position: 490089-488299 (Counterclockwise)

Preceding gene: 23501393

Following gene: 23501390

Centisome position: 23.25

GC content: 61.92

Gene sequence:

>1791_bases
ATGAATTTCGCGGAGTTGCGTCATAACCGATATTTGAGGGTGCTGTTCGTACCCTTTCGCACACGCGCACTGGTTCGCGG
CAGCGAAATCGGCATCGTCATTGCGGGCGCGCTCATCGGTATCCTGTCCGGGCTTGCCGTCGCGGCCATCGGCGGTATCT
CGCAATGGATGCATCAGGCAATCTTCGGCCTCCAGCAGGGAGAGCGGCTGAGTGCGGCCATCCAGCTTTATCCGAGCGCC
TTCATCGCACCCATGGCGGGCGGCATATTGATGGGCGTGCTGATCTGGGTTCTGGCGCGCTGGCGCAAACGTCCCATCGT
CGACCCCATCGAGGCGAACGCCCTCCATGGCGGACGCCTGTCACTGACCGACAGTTTCATTCTGGTCGGGCAGAACCTCA
TTTCCAACGGCTTTGGCGCTTCGGTGGGGCTGGAAGCGGCCTATACGCAGCTTGCGAGCGGCTTTGCCTCACGCATCGGG
CGCGCACTGAAACTGCGCCGCGCCGACATGCGCACCCTCGTCGGCTGCGGCGCGGCGGCAGCCATCGCCAGCGCCTTCAA
TGCGCCGCTGACCGGCTCGTTCTATGCCTTCGAGCTTATCATCGGCGTTTATTCCATCGCCACACTTGCCCCCGTCGTGG
TCGCGGCCATCATCGGGACGCTTGTGACGCAGGCCATAGGCGGCGCACCTTTCATTATCGATATCGGCCTGATCGACGAC
ATCACCCCGCGCGACTATGTACCGGCCCTCATGCTCGGCTTCATTTCAGCGGGCATCGCCATTCTCATCATGCGTGGCGT
TACCCTGGTGGAAAAGGTCGCACGGCGCAGCGTGGTGCCCAATGTGCTGGCGCCGGCAATCGGCGGCGCAATCGTCGGCA
TGATTGCGTTTTTCTCGCCGCAGGTTCTGGCCTCCGGCCATGGCGCGCTGCATCTCGATCTCAACGCCAACATCACCATT
CCAGTGCTGGTGCTTCTGATCCTCACCAAATCGCTGGCATCGGCGGTTTTCATCGGATCCGGCTTCCGCGGCGGCCTGTT
TTTCGCCTCCCTGTTTCTGGGCGCGCTCACCGGCAAGCTTTTCGCGGCCATAGCCGGGACCATCATGCCTGCAAGCCTTG
CGCTGGCACCGGAAGTCTATGCCGTCATCGGCATGAGCTCGCTTGCCGTGGCTGTGGTTGGCGGGCCGATGACCATGACC
TTCCTCGCGCTCGAAATGACCGGAGACTTTCCGATCTCCATGCTGGTTCTGGGCGCGGCCGTTTCATCCTCGCTGATGGT
GAGAAAAACCTTCGGCTACTCCTTCGCAACCTGGCGCTTCCACCTGCGCGGCGAGGCCATACGCTCCGCGCACGACATCG
GCTGGATACGCGATCTCACCGTCGCGCGCATGATGCGCCATGACGTGCGCACCGTTGCGATCGATACCGATATCGAAACC
TTCCGCCACGATTTTCCGCTCGGCTCCACCCAGCGCGTGATCGCGGTGGACAGCGAAGGCCGCTATGTCGGCATGATCCC
CGTGCCGGAGGCCTATGGCGACAGTTTCGATACCGCAGACAAGACTCACAGTATTGCGGAGCTGCTCAAATATCAGGATG
AGTTCCTTCTGCCACAAATGAACGCAAAGGAAGCCGTCGCCCGCTTCGACCGGGCGGAAAGCGAAGCGCTGGCGGTCATC
GACAATGCGCAGGACCGCAAGGTTCTGGGGCTTTTGAGCGAAGCGCACACATTGCGCCGCTACAGCGAAGAACTGGACCG
CCGCCGCCGCGAAGTTGCCGGCGAAGTTTGA

Upstream 100 bases:

>100_bases
GGTTATTTCTTTTGGTCTATGATCCGGCGGCAAATGACGATGATGCAATGTGTGTGGCAGCCGCTCGCAGACTGAAGTGC
CTGTCGGGTGTAGTTTGATA

Downstream 100 bases:

>100_bases
CGGGCCCATCATAAAGGTGTAGCTCATCGCCCGTATTTTCCGGCCCGGTCGTTCCGGCGATTGCCGGTCGTCTTTTCCCT
TTCACGCATTGCCAGACGGG

Product: voltage gated chloride channel family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 596; Mature: 596

Protein sequence:

>596_residues
MNFAELRHNRYLRVLFVPFRTRALVRGSEIGIVIAGALIGILSGLAVAAIGGISQWMHQAIFGLQQGERLSAAIQLYPSA
FIAPMAGGILMGVLIWVLARWRKRPIVDPIEANALHGGRLSLTDSFILVGQNLISNGFGASVGLEAAYTQLASGFASRIG
RALKLRRADMRTLVGCGAAAAIASAFNAPLTGSFYAFELIIGVYSIATLAPVVVAAIIGTLVTQAIGGAPFIIDIGLIDD
ITPRDYVPALMLGFISAGIAILIMRGVTLVEKVARRSVVPNVLAPAIGGAIVGMIAFFSPQVLASGHGALHLDLNANITI
PVLVLLILTKSLASAVFIGSGFRGGLFFASLFLGALTGKLFAAIAGTIMPASLALAPEVYAVIGMSSLAVAVVGGPMTMT
FLALEMTGDFPISMLVLGAAVSSSLMVRKTFGYSFATWRFHLRGEAIRSAHDIGWIRDLTVARMMRHDVRTVAIDTDIET
FRHDFPLGSTQRVIAVDSEGRYVGMIPVPEAYGDSFDTADKTHSIAELLKYQDEFLLPQMNAKEAVARFDRAESEALAVI
DNAQDRKVLGLLSEAHTLRRYSEELDRRRREVAGEV

Sequences:

>Translated_596_residues
MNFAELRHNRYLRVLFVPFRTRALVRGSEIGIVIAGALIGILSGLAVAAIGGISQWMHQAIFGLQQGERLSAAIQLYPSA
FIAPMAGGILMGVLIWVLARWRKRPIVDPIEANALHGGRLSLTDSFILVGQNLISNGFGASVGLEAAYTQLASGFASRIG
RALKLRRADMRTLVGCGAAAAIASAFNAPLTGSFYAFELIIGVYSIATLAPVVVAAIIGTLVTQAIGGAPFIIDIGLIDD
ITPRDYVPALMLGFISAGIAILIMRGVTLVEKVARRSVVPNVLAPAIGGAIVGMIAFFSPQVLASGHGALHLDLNANITI
PVLVLLILTKSLASAVFIGSGFRGGLFFASLFLGALTGKLFAAIAGTIMPASLALAPEVYAVIGMSSLAVAVVGGPMTMT
FLALEMTGDFPISMLVLGAAVSSSLMVRKTFGYSFATWRFHLRGEAIRSAHDIGWIRDLTVARMMRHDVRTVAIDTDIET
FRHDFPLGSTQRVIAVDSEGRYVGMIPVPEAYGDSFDTADKTHSIAELLKYQDEFLLPQMNAKEAVARFDRAESEALAVI
DNAQDRKVLGLLSEAHTLRRYSEELDRRRREVAGEV
>Mature_596_residues
MNFAELRHNRYLRVLFVPFRTRALVRGSEIGIVIAGALIGILSGLAVAAIGGISQWMHQAIFGLQQGERLSAAIQLYPSA
FIAPMAGGILMGVLIWVLARWRKRPIVDPIEANALHGGRLSLTDSFILVGQNLISNGFGASVGLEAAYTQLASGFASRIG
RALKLRRADMRTLVGCGAAAAIASAFNAPLTGSFYAFELIIGVYSIATLAPVVVAAIIGTLVTQAIGGAPFIIDIGLIDD
ITPRDYVPALMLGFISAGIAILIMRGVTLVEKVARRSVVPNVLAPAIGGAIVGMIAFFSPQVLASGHGALHLDLNANITI
PVLVLLILTKSLASAVFIGSGFRGGLFFASLFLGALTGKLFAAIAGTIMPASLALAPEVYAVIGMSSLAVAVVGGPMTMT
FLALEMTGDFPISMLVLGAAVSSSLMVRKTFGYSFATWRFHLRGEAIRSAHDIGWIRDLTVARMMRHDVRTVAIDTDIET
FRHDFPLGSTQRVIAVDSEGRYVGMIPVPEAYGDSFDTADKTHSIAELLKYQDEFLLPQMNAKEAVARFDRAESEALAVI
DNAQDRKVLGLLSEAHTLRRYSEELDRRRREVAGEV

Specific function: Unknown

COG id: COG0038

COG function: function code P; Chloride channel protein EriC

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the chloride channel (TC 2.A.49) family. ClcB subfamily [H]

Homologues:

Organism=Escherichia coli, GI87081943, Length=406, Percent_Identity=27.3399014778325, Blast_Score=79, Evalue=9e-16,
Organism=Escherichia coli, GI1786350, Length=253, Percent_Identity=23.7154150197628, Blast_Score=66, Evalue=6e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR014743
- InterPro:   IPR001807 [H]

Pfam domain/function: PF00654 Voltage_CLC [H]

EC number: NA

Molecular weight: Translated: 63619; Mature: 63619

Theoretical pI: Translated: 9.37; Mature: 9.37

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNFAELRHNRYLRVLFVPFRTRALVRGSEIGIVIAGALIGILSGLAVAAIGGISQWMHQA
CCHHHHHCCCEEEEEEECCHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
IFGLQQGERLSAAIQLYPSAFIAPMAGGILMGVLIWVLARWRKRPIVDPIEANALHGGRL
HHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEE
SLTDSFILVGQNLISNGFGASVGLEAAYTQLASGFASRIGRALKLRRADMRTLVGCGAAA
EECCCHHHHCHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHH
AIASAFNAPLTGSFYAFELIIGVYSIATLAPVVVAAIIGTLVTQAIGGAPFIIDIGLIDD
HHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCC
ITPRDYVPALMLGFISAGIAILIMRGVTLVEKVARRSVVPNVLAPAIGGAIVGMIAFFSP
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCC
QVLASGHGALHLDLNANITIPVLVLLILTKSLASAVFIGSGFRGGLFFASLFLGALTGKL
HHHCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHH
FAAIAGTIMPASLALAPEVYAVIGMSSLAVAVVGGPMTMTFLALEMTGDFPISMLVLGAA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCEEEEEEEEECCCCCHHHHHHHHH
VSSSLMVRKTFGYSFATWRFHLRGEAIRSAHDIGWIRDLTVARMMRHDVRTVAIDTDIET
HHHHHHEEHHCCCEEEEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEECCHHH
FRHDFPLGSTQRVIAVDSEGRYVGMIPVPEAYGDSFDTADKTHSIAELLKYQDEFLLPQM
HHHCCCCCCCCEEEEECCCCCEEEEEECCHHHCCCCCCCHHHHHHHHHHHHHHHHCCCCC
NAKEAVARFDRAESEALAVIDNAQDRKVLGLLSEAHTLRRYSEELDRRRREVAGEV
CHHHHHHHHHCCCCCCEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MNFAELRHNRYLRVLFVPFRTRALVRGSEIGIVIAGALIGILSGLAVAAIGGISQWMHQA
CCHHHHHCCCEEEEEEECCHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
IFGLQQGERLSAAIQLYPSAFIAPMAGGILMGVLIWVLARWRKRPIVDPIEANALHGGRL
HHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEE
SLTDSFILVGQNLISNGFGASVGLEAAYTQLASGFASRIGRALKLRRADMRTLVGCGAAA
EECCCHHHHCHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHH
AIASAFNAPLTGSFYAFELIIGVYSIATLAPVVVAAIIGTLVTQAIGGAPFIIDIGLIDD
HHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCC
ITPRDYVPALMLGFISAGIAILIMRGVTLVEKVARRSVVPNVLAPAIGGAIVGMIAFFSP
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCC
QVLASGHGALHLDLNANITIPVLVLLILTKSLASAVFIGSGFRGGLFFASLFLGALTGKL
HHHCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHH
FAAIAGTIMPASLALAPEVYAVIGMSSLAVAVVGGPMTMTFLALEMTGDFPISMLVLGAA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCEEEEEEEEECCCCCHHHHHHHHH
VSSSLMVRKTFGYSFATWRFHLRGEAIRSAHDIGWIRDLTVARMMRHDVRTVAIDTDIET
HHHHHHEEHHCCCEEEEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEECCHHH
FRHDFPLGSTQRVIAVDSEGRYVGMIPVPEAYGDSFDTADKTHSIAELLKYQDEFLLPQM
HHHCCCCCCCCEEEEECCCCCEEEEEECCHHHCCCCCCCHHHHHHHHHHHHHHHHCCCCC
NAKEAVARFDRAESEALAVIDNAQDRKVLGLLSEAHTLRRYSEELDRRRREVAGEV
CHHHHHHHHHCCCCCCEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 11823852 [H]