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The map label for this gene is yehW [H]

Identifier: 23501129

GI number: 23501129

Start: 233513

End: 234259

Strand: Reverse

Name: yehW [H]

Synonym: BR0222

Alternate gene names: 23501129

Gene position: 234259-233513 (Counterclockwise)

Preceding gene: 23501130

Following gene: 23501128

Centisome position: 11.11

GC content: 61.18

Gene sequence:

>747_bases
ATGAAGCTTTTCCTTTCCCTGTTTCCGCGCATGGTGCTTGTGGCGGTGCTGCTGCTCTTTCTCCTGCACCCGCATCTTTT
CGAGCCGGTTTTCCGCCCGTTCGTCGATGCGGGAACCCCGGTCATCTATGACCGCGCGAACCTGATGACGCTCACCTTGC
AGCATCTGGGGCTGGTGGCGCTTGCCACTTTCTGTTCGACGCTTATCGCCGTCACCATGGCGATCTTCGTCACGCGCAGG
CAGGGCGCGGAATTCCTGCCGCTGTCGCGCAGCCTGGTCAATATCGGCCAGACTTTCCCGCCCGTCGCGGTTCTGGCGCT
GGCTGTGCCCGTCTTTGGCTTCGGTGACAAGCCGACGCTGATCGCGCTTTTTCTCTATGGCCTGCTGCCGATCTTCGAGA
ACACGCTCACCGGGTTGACAAGCCTGCCACCGCCCATCGTGGAGGCCGCGCGCGGCATGGGCATGACGGGTATGCAGCGG
CTTTTCAAGGTGGAGATGCCACTTGCCATGCCGGTGATCCTCGCAGGCATCCGGCTTTCCGCCGTTATTGGGCTGGCCAC
CGCCACCATCGGCTCCACGGTTGCAGCAAAGACACTGGGCGAGGTCATCATTGCCGGGCTTATATCCAACAATCTCGCCT
TCGTACTGGAAGGTGGCCTCGTCGTTGCAGCACTCGCCATCCTCATCTTCGACGCCTTTCAGGCGGCGGAGCACTATCTG
ATGAAGCGAACAGGTCGAACGGCCTGA

Upstream 100 bases:

>100_bases
TCTGGTCGGGCCGAAGGGCGCTGCCGGTGCTCGATGAAGACGGCCGATCGCTTGGCCGCGTGACATTGGAAAAGCTACTG
CATCAGGCAGAGCGCCCGGC

Downstream 100 bases:

>100_bases
CTTGCCTCGCTGACCAGCCTCCCTGCCCTGCCTTCCTGACTGGCCCTTTGAATAGATTTCCCAACTCCCTATATGGTGCC
AAACAGCAAGCGAGCGAGGC

Product: ABC transporter permease

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 248; Mature: 248

Protein sequence:

>248_residues
MKLFLSLFPRMVLVAVLLLFLLHPHLFEPVFRPFVDAGTPVIYDRANLMTLTLQHLGLVALATFCSTLIAVTMAIFVTRR
QGAEFLPLSRSLVNIGQTFPPVAVLALAVPVFGFGDKPTLIALFLYGLLPIFENTLTGLTSLPPPIVEAARGMGMTGMQR
LFKVEMPLAMPVILAGIRLSAVIGLATATIGSTVAAKTLGEVIIAGLISNNLAFVLEGGLVVAALAILIFDAFQAAEHYL
MKRTGRTA

Sequences:

>Translated_248_residues
MKLFLSLFPRMVLVAVLLLFLLHPHLFEPVFRPFVDAGTPVIYDRANLMTLTLQHLGLVALATFCSTLIAVTMAIFVTRR
QGAEFLPLSRSLVNIGQTFPPVAVLALAVPVFGFGDKPTLIALFLYGLLPIFENTLTGLTSLPPPIVEAARGMGMTGMQR
LFKVEMPLAMPVILAGIRLSAVIGLATATIGSTVAAKTLGEVIIAGLISNNLAFVLEGGLVVAALAILIFDAFQAAEHYL
MKRTGRTA
>Mature_248_residues
MKLFLSLFPRMVLVAVLLLFLLHPHLFEPVFRPFVDAGTPVIYDRANLMTLTLQHLGLVALATFCSTLIAVTMAIFVTRR
QGAEFLPLSRSLVNIGQTFPPVAVLALAVPVFGFGDKPTLIALFLYGLLPIFENTLTGLTSLPPPIVEAARGMGMTGMQR
LFKVEMPLAMPVILAGIRLSAVIGLATATIGSTVAAKTLGEVIIAGLISNNLAFVLEGGLVVAALAILIFDAFQAAEHYL
MKRTGRTA

Specific function: May be part of an ABC transporter complex involved in uptake of osmoprotectant molecules. Probably responsible for the translocation of the substrate across the membrane [H]

COG id: COG1174

COG function: function code E; ABC-type proline/glycine betaine transport systems, permease component

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-1 domain [H]

Homologues:

Organism=Escherichia coli, GI1788449, Length=193, Percent_Identity=49.740932642487, Blast_Score=178, Evalue=2e-46,
Organism=Escherichia coli, GI1788451, Length=200, Percent_Identity=37.5, Blast_Score=99, Evalue=2e-22,
Organism=Escherichia coli, GI1789033, Length=183, Percent_Identity=30.6010928961749, Blast_Score=85, Evalue=5e-18,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000515 [H]

Pfam domain/function: PF00528 BPD_transp_1 [H]

EC number: NA

Molecular weight: Translated: 26529; Mature: 26529

Theoretical pI: Translated: 10.01; Mature: 10.01

Prosite motif: PS50928 ABC_TM1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
4.0 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
4.0 %Met     (Mature Protein)
4.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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HHHCCCCC
>Mature Secondary Structure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HHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9278503 [H]