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The map label for this gene is yejB [H]

Identifier: 23500924

GI number: 23500924

Start: 9610

End: 10707

Strand: Reverse

Name: yejB [H]

Synonym: BR0008

Alternate gene names: 23500924

Gene position: 10707-9610 (Counterclockwise)

Preceding gene: 23500925

Following gene: 23500923

Centisome position: 0.51

GC content: 55.92

Gene sequence:

>1098_bases
ATGGGCGCATATATTCTTCGCCGCCTGCTTCTGATGATCCCCACCCTACTGGGTATTATGGCCATTTCCTTCGCTGTCGT
ACAATTCGCCCCCGGCGGCCCGGTCGAGCGCGTAATCGCGCAGCTTTCCGGCCAGGGCGGCGATGCGCTCGACCGTCTTT
CCGGCGCAGGCAGCGATTTCGGCCAAAGTGCTATCGATAGCGGTTCGGTCAGTTCCAAATATCGCGGCGCTCAGGGCCTT
GATCCGCAATTCATCGCAGATCTGGAGAAGCAGTTCGGTTTCGACAAGCCTCCGCTGGAGCGTTTCGGCCAGATGTTGTG
GAACTATATGCGCTTCGATTTCGGCCGCAGCTATTTCCGCGACATCAGCGTGATCGATCTTATCAAGGAAAAAATGCCGG
TTTCGATCTCGCTCGGTCTATGGCTGACCTTTCTGTCCTACATGATCTCGATTCCACTCGGCATTCGCAAGGCGATCAAG
GATGGTTCGCGCTTCGACACATGGACCAGCGCCGTCATCATCATCGGCTATGCCATTCCAAGCTTCCTTTTCGCCATTCT
TCTGATCGTGGTCTTTGCGGGCGGTTCCTTCTTTGACTGGTTCCCCTTGCGCGGCCTCACCTCGCCCGATTTCGCGCAGA
TGACATGGTTCGAGAAGATCAAGGATTATCTCTGGCACATGGTCCTGCCGGTAACGGCACTGGTGCTTTCGGCCTTTGCA
ACGACGACACTTCTCACCAAGAATTCGTTTCTGGAAGAAATCCGCAAGCAATATGTGACGACCGCACGCGCCAAGGGGCT
GACCGAGAACCAGGTTCTCTATCGCCACGTCTTCCGCAATGCGATGCTGATCGTGATCGCCGGTTTTCCCGGTGCGTTCA
TTTCCGCCTTCTTCACCGGTTCGCTTTTGATCGAGACGATCTTCTCGCTCGACGGGCTTGGCCTGCTCGGCTACCAGTCG
GTCATCAACCGCGACTATCCGGTGGTTTTCGCCAATCTCTTCATCTTTTCGCTGATTGGCCTTCTGGTCGGCCTCCTGTC
CGATCTTACCTATACGTGGATCGATCCGCGCATCGATTTCGACCGGAGGGACGTGTGA

Upstream 100 bases:

>100_bases
TGGCGATCCGTTTTCGGAAAAGATCATGCTCTGCATTGAAAAGGCAAAAGCTATTGGCAAGCTATAAGAAAAACCCGAAC
TCCCGGATAAGGTCCAGCTG

Downstream 100 bases:

>100_bases
TGACCGACACCGCACTCACCCCCGCCGCAAAGCCGGTAAAACGGCCATGGCTCTCGCCGCTCAACAAGCGCCGCTGGCAG
AATTTCAAGGCCCACCGGCG

Product: ABC transporter permease

Products: ADP; phosphate; oligopeptides [Cytoplasm] [C]

Alternate protein names: NA

Number of amino acids: Translated: 365; Mature: 364

Protein sequence:

>365_residues
MGAYILRRLLLMIPTLLGIMAISFAVVQFAPGGPVERVIAQLSGQGGDALDRLSGAGSDFGQSAIDSGSVSSKYRGAQGL
DPQFIADLEKQFGFDKPPLERFGQMLWNYMRFDFGRSYFRDISVIDLIKEKMPVSISLGLWLTFLSYMISIPLGIRKAIK
DGSRFDTWTSAVIIIGYAIPSFLFAILLIVVFAGGSFFDWFPLRGLTSPDFAQMTWFEKIKDYLWHMVLPVTALVLSAFA
TTTLLTKNSFLEEIRKQYVTTARAKGLTENQVLYRHVFRNAMLIVIAGFPGAFISAFFTGSLLIETIFSLDGLGLLGYQS
VINRDYPVVFANLFIFSLIGLLVGLLSDLTYTWIDPRIDFDRRDV

Sequences:

>Translated_365_residues
MGAYILRRLLLMIPTLLGIMAISFAVVQFAPGGPVERVIAQLSGQGGDALDRLSGAGSDFGQSAIDSGSVSSKYRGAQGL
DPQFIADLEKQFGFDKPPLERFGQMLWNYMRFDFGRSYFRDISVIDLIKEKMPVSISLGLWLTFLSYMISIPLGIRKAIK
DGSRFDTWTSAVIIIGYAIPSFLFAILLIVVFAGGSFFDWFPLRGLTSPDFAQMTWFEKIKDYLWHMVLPVTALVLSAFA
TTTLLTKNSFLEEIRKQYVTTARAKGLTENQVLYRHVFRNAMLIVIAGFPGAFISAFFTGSLLIETIFSLDGLGLLGYQS
VINRDYPVVFANLFIFSLIGLLVGLLSDLTYTWIDPRIDFDRRDV
>Mature_364_residues
GAYILRRLLLMIPTLLGIMAISFAVVQFAPGGPVERVIAQLSGQGGDALDRLSGAGSDFGQSAIDSGSVSSKYRGAQGLD
PQFIADLEKQFGFDKPPLERFGQMLWNYMRFDFGRSYFRDISVIDLIKEKMPVSISLGLWLTFLSYMISIPLGIRKAIKD
GSRFDTWTSAVIIIGYAIPSFLFAILLIVVFAGGSFFDWFPLRGLTSPDFAQMTWFEKIKDYLWHMVLPVTALVLSAFAT
TTLLTKNSFLEEIRKQYVTTARAKGLTENQVLYRHVFRNAMLIVIAGFPGAFISAFFTGSLLIETIFSLDGLGLLGYQSV
INRDYPVVFANLFIFSLIGLLVGLLSDLTYTWIDPRIDFDRRDV

Specific function: Probably part of a binding-protein-dependent transport system. Probably responsible for the translocation of the substrate across the membrane [H]

COG id: COG4174

COG function: function code R; ABC-type uncharacterized transport system, permease component

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-1 domain [H]

Homologues:

Organism=Escherichia coli, GI1788504, Length=364, Percent_Identity=60.989010989011, Blast_Score=463, Evalue=1e-132,
Organism=Escherichia coli, GI1789965, Length=378, Percent_Identity=30.4232804232804, Blast_Score=159, Evalue=2e-40,
Organism=Escherichia coli, GI1787497, Length=361, Percent_Identity=29.0858725761773, Blast_Score=154, Evalue=1e-38,
Organism=Escherichia coli, GI1789888, Length=361, Percent_Identity=27.1468144044321, Blast_Score=128, Evalue=6e-31,
Organism=Escherichia coli, GI1787053, Length=366, Percent_Identity=29.2349726775956, Blast_Score=125, Evalue=4e-30,
Organism=Escherichia coli, GI1787550, Length=276, Percent_Identity=26.0869565217391, Blast_Score=86, Evalue=5e-18,
Organism=Escherichia coli, GI1787761, Length=286, Percent_Identity=26.5734265734266, Blast_Score=81, Evalue=9e-17,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000515 [H]

Pfam domain/function: PF00528 BPD_transp_1 [H]

EC number: NA

Molecular weight: Translated: 40776; Mature: 40645

Theoretical pI: Translated: 8.64; Mature: 8.64

Prosite motif: PS50928 ABC_TM1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGAYILRRLLLMIPTLLGIMAISFAVVQFAPGGPVERVIAQLSGQGGDALDRLSGAGSDF
CCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCHHHHHHCCCCCCH
GQSAIDSGSVSSKYRGAQGLDPQFIADLEKQFGFDKPPLERFGQMLWNYMRFDFGRSYFR
HHHHHCCCCCCHHCCCCCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHH
DISVIDLIKEKMPVSISLGLWLTFLSYMISIPLGIRKAIKDGSRFDTWTSAVIIIGYAIP
HHHHHHHHHHCCCCEEHHHHHHHHHHHHHHCCHHHHHHHCCCCCCHHHHHHHHHHHHHHH
SFLFAILLIVVFAGGSFFDWFPLRGLTSPDFAQMTWFEKIKDYLWHMVLPVTALVLSAFA
HHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
TTTLLTKNSFLEEIRKQYVTTARAKGLTENQVLYRHVFRNAMLIVIAGFPGAFISAFFTG
HHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCEEEEECCCHHHHHHHHHH
SLLIETIFSLDGLGLLGYQSVINRDYPVVFANLFIFSLIGLLVGLLSDLTYTWIDPRIDF
HHHHHHHHHHCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCHHHHCCCCCCC
DRRDV
CCCCC
>Mature Secondary Structure 
GAYILRRLLLMIPTLLGIMAISFAVVQFAPGGPVERVIAQLSGQGGDALDRLSGAGSDF
CHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCHHHHHHCCCCCCH
GQSAIDSGSVSSKYRGAQGLDPQFIADLEKQFGFDKPPLERFGQMLWNYMRFDFGRSYFR
HHHHHCCCCCCHHCCCCCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHH
DISVIDLIKEKMPVSISLGLWLTFLSYMISIPLGIRKAIKDGSRFDTWTSAVIIIGYAIP
HHHHHHHHHHCCCCEEHHHHHHHHHHHHHHCCHHHHHHHCCCCCCHHHHHHHHHHHHHHH
SFLFAILLIVVFAGGSFFDWFPLRGLTSPDFAQMTWFEKIKDYLWHMVLPVTALVLSAFA
HHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
TTTLLTKNSFLEEIRKQYVTTARAKGLTENQVLYRHVFRNAMLIVIAGFPGAFISAFFTG
HHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCEEEEECCCHHHHHHHHHH
SLLIETIFSLDGLGLLGYQSVINRDYPVVFANLFIFSLIGLLVGLLSDLTYTWIDPRIDF
HHHHHHHHHHCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCHHHHCCCCCCC
DRRDV
CCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: ATP; oligopeptides [Periplasm]; H2O [C]

Specific reaction: ATP + oligopeptides [Periplasm] + H2O = ADP + phosphate + oligopeptides [Cytoplasm] [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]