Click here to switch to the map view.

The map label for this gene is noc

Identifier: 23100943

GI number: 23100943

Start: 3621893

End: 3622753

Strand: Reverse

Name: noc

Synonym: OB3488

Alternate gene names: 23100943

Gene position: 3622753-3621893 (Counterclockwise)

Preceding gene: 23100944

Following gene: 23100942

Centisome position: 99.79

GC content: 34.15

Gene sequence:

>861_bases
TTGGTGCATCCTTTTAATCGTATATTTGGAAAGAGTGATAAGGAGAATATCGATACGGATGAAGTAGAATATTCTACTGA
TGAGGTCATTCAAATAAAGGTAGATAACATTCACCCCAATCGTTATCAGCCACGGACAATCTTCCAAGAAGAAAAAATAA
AAGAACTTGCACAAACTATTCATACACATGGGATGATTCAACCTATTGTTGTTCGAAAGTTAGAGGATGAAGATACGTAT
GAATTAATTGCAGGTGAAAGAAGATGGCGTGCAGTTCAACATTTAGGTTGGGAGCAAGTATCTGCGATTATTAGAGATAT
GACAGATACGGAGACTGCTTCTGTAGCACTTATAGAGAATTTACAACGTGAAGAACTAACTGTAATTGAAGAAGCAATCG
CTTATTCTAAATTACTAGAGTTGCATTCATTAACACAAGAAGCACTTGCGCAAAGACTTGGGAAGAATCAATCAACAGTT
GCAAATAAACTTAGGTTATTAAAACTTCCTGAAGAGGTTCAAACAGCTTTATTAGATAAAGCAATATCAGAAAGGCATGC
ACGAGCGTTGATTAAGTTAAAACAAGAAGATCAACAAATAGCTGTTTTACATGAGATATTAGAGAAAGGTTTAAATGTAA
AACAAACGGAAGATCGAATTGCCCAGATAAATGAACCAAAAGAAAAGAAGAAACCAAAACCAAAGTTTAAAGGTGTAAAC
AAGGATATACGAATCGCGATGAATACGATTCGTCAATCTCTTAATATGGTATCTGATACAGGAGTAGAAGTAGAATCTGA
TGAAAAAGAGTTAGATGATTACTATCAAATAACGATAAAGATACCGAAAAAAAATCAATAG

Upstream 100 bases:

>100_bases
GTAATCTAAAAATTCATATAATGTTTCACGTGAAACATTTTTACATAAATAATTTATTGAAGATCTATAGTTTGTTAAAT
TTTGAAGGTGGTGTCAAGAA

Downstream 100 bases:

>100_bases
AATTTATCATTTTAATAGCATCTATGCGACCCATCTACATGAATAAGATGGGTTTTCTTTGATGTCGATATTACAATTTC
ACTAAATTCGAAGATTTAAT

Product: hypothetical protein

Products: NA

Alternate protein names: Noc

Number of amino acids: Translated: 286; Mature: 286

Protein sequence:

>286_residues
MVHPFNRIFGKSDKENIDTDEVEYSTDEVIQIKVDNIHPNRYQPRTIFQEEKIKELAQTIHTHGMIQPIVVRKLEDEDTY
ELIAGERRWRAVQHLGWEQVSAIIRDMTDTETASVALIENLQREELTVIEEAIAYSKLLELHSLTQEALAQRLGKNQSTV
ANKLRLLKLPEEVQTALLDKAISERHARALIKLKQEDQQIAVLHEILEKGLNVKQTEDRIAQINEPKEKKKPKPKFKGVN
KDIRIAMNTIRQSLNMVSDTGVEVESDEKELDDYYQITIKIPKKNQ

Sequences:

>Translated_286_residues
MVHPFNRIFGKSDKENIDTDEVEYSTDEVIQIKVDNIHPNRYQPRTIFQEEKIKELAQTIHTHGMIQPIVVRKLEDEDTY
ELIAGERRWRAVQHLGWEQVSAIIRDMTDTETASVALIENLQREELTVIEEAIAYSKLLELHSLTQEALAQRLGKNQSTV
ANKLRLLKLPEEVQTALLDKAISERHARALIKLKQEDQQIAVLHEILEKGLNVKQTEDRIAQINEPKEKKKPKPKFKGVN
KDIRIAMNTIRQSLNMVSDTGVEVESDEKELDDYYQITIKIPKKNQ
>Mature_286_residues
MVHPFNRIFGKSDKENIDTDEVEYSTDEVIQIKVDNIHPNRYQPRTIFQEEKIKELAQTIHTHGMIQPIVVRKLEDEDTY
ELIAGERRWRAVQHLGWEQVSAIIRDMTDTETASVALIENLQREELTVIEEAIAYSKLLELHSLTQEALAQRLGKNQSTV
ANKLRLLKLPEEVQTALLDKAISERHARALIKLKQEDQQIAVLHEILEKGLNVKQTEDRIAQINEPKEKKKPKPKFKGVN
KDIRIAMNTIRQSLNMVSDTGVEVESDEKELDDYYQITIKIPKKNQ

Specific function: Effects nucleoid occlusion by binding relatively nonspecifically to DNA and preventing the assembly of the division machinery in the vicinity of the nucleoid, especially under conditions that disturb the cell cycle. It helps to coordinate cell division an

COG id: COG1475

COG function: function code K; Predicted transcriptional regulators

Gene ontology:

Cell location: Cytoplasm, nucleoid

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the parB family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NOC_OCEIH (Q8EKU5)

Other databases:

- EMBL:   BA000028
- RefSeq:   NP_694410.1
- HSSP:   P07674
- ProteinModelPortal:   Q8EKU5
- GeneID:   1016077
- GenomeReviews:   BA000028_GR
- KEGG:   oih:OB3488
- NMPDR:   fig|221109.1.peg.3492
- HOGENOM:   HBG641230
- OMA:   RFQPRTI
- BioCyc:   OIHE221109:OB3488-MONOMER
- GO:   GO:0005737
- GO:   GO:0009295
- HAMAP:   MF_02015
- InterPro:   IPR004437
- InterPro:   IPR003115
- InterPro:   IPR013741
- SMART:   SM00470
- TIGRFAMs:   TIGR00180

Pfam domain/function: PF08535 KorB; PF02195 ParBc; SSF110849 ParBc

EC number: NA

Molecular weight: Translated: 33116; Mature: 33116

Theoretical pI: Translated: 5.92; Mature: 5.92

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
1.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
1.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVHPFNRIFGKSDKENIDTDEVEYSTDEVIQIKVDNIHPNRYQPRTIFQEEKIKELAQTI
CCCCCHHHHCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHH
HTHGMIQPIVVRKLEDEDTYELIAGERRWRAVQHLGWEQVSAIIRDMTDTETASVALIEN
HHCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCHHHHHHHHHH
LQREELTVIEEAIAYSKLLELHSLTQEALAQRLGKNQSTVANKLRLLKLPEEVQTALLDK
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCHHHHHHHHHH
AISERHARALIKLKQEDQQIAVLHEILEKGLNVKQTEDRIAQINEPKEKKKPKPKFKGVN
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCCHHHCCCCCCCCCCC
KDIRIAMNTIRQSLNMVSDTGVEVESDEKELDDYYQITIKIPKKNQ
HHHHHHHHHHHHHHHHHHHCCCCCCCCHHHCCCEEEEEEECCCCCC
>Mature Secondary Structure
MVHPFNRIFGKSDKENIDTDEVEYSTDEVIQIKVDNIHPNRYQPRTIFQEEKIKELAQTI
CCCCCHHHHCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHH
HTHGMIQPIVVRKLEDEDTYELIAGERRWRAVQHLGWEQVSAIIRDMTDTETASVALIEN
HHCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCHHHHHHHHHH
LQREELTVIEEAIAYSKLLELHSLTQEALAQRLGKNQSTVANKLRLLKLPEEVQTALLDK
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCHHHHHHHHHH
AISERHARALIKLKQEDQQIAVLHEILEKGLNVKQTEDRIAQINEPKEKKKPKPKFKGVN
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCCHHHCCCCCCCCCCC
KDIRIAMNTIRQSLNMVSDTGVEVESDEKELDDYYQITIKIPKKNQ
HHHHHHHHHHHHHHHHHHHCCCCCCCCHHHCCCEEEEEEECCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 12235376