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The map label for this gene is ydfK [H]

Identifier: 23100940

GI number: 23100940

Start: 3619178

End: 3619882

Strand: Reverse

Name: ydfK [H]

Synonym: OB3485

Alternate gene names: 23100940

Gene position: 3619882-3619178 (Counterclockwise)

Preceding gene: 23100941

Following gene: 23100938

Centisome position: 99.71

GC content: 35.46

Gene sequence:

>705_bases
ATGGTATTACTTGGTACAGTAGTAAATGGAATATTAATTATAATTGGAAGTATATTAGGTTTGTTTTTCACGAAAATTCC
CGAAAAGTATAAAGAAACGGTGATGAGTGGAATAGGATTAGTCGTTTTCCTTATAGGTTTACAAATGGCATTTGAAACAG
ATCAGATTATAATTGTATTGCTGAGCTTGCTAACGGGGGCATTAATAGGTGAATTCATAGGGTTAGAAGAGCGACTGAAC
CAATTAGGTGAGTGGGTAGGGCATAGAGTATCAACAAAGAGTGAGGAAACGAGTATAGCTCAAGGTTTTGTTACAGCTTC
TCTCATATTCTGTATTGGAGCAATGGCAATTATCGGTGCATTAGATAGTGGCATTCGAGGTGATCATGAGGTATTGATGA
CAAAGGGTGTCATTGACGGGTTTACATCCCTTGTATTAACAACTACTTTAGGTTTTGGAGTTATTTTATCCGTTATTCCA
GTGGTTGTATATCAAGGATTAATTGCCTTATTTGCAACACAAATAGAAAATTGGGTATCGGCGACTTTTTTAGACGGTTT
AATCGTGGAGCTAACAGCTGTAGGAGGTTTATTGATTGTAGCGATTGGATTAAATCTATTAAATATAACAAATATAAGAA
TCGGAAACCTACTTCCTTCCATTGGAACGGTGATTATCATTTATAGTATTGTGCAATTTCTTTAA

Upstream 100 bases:

>100_bases
CATTTTTACGATCACTTATATAGTAACGAGTACATATTTAGACAAAATGTTCCACGTGAAACATTGTTAAAAACATCAAT
GATATATAGGAGAAGAATAT

Downstream 100 bases:

>100_bases
AGTAAAGTTGTGCTTTTTTACTTGTAAATAGTCGATTTATGTTGCACTAGCATGCAATGGGGAAGAATAAAAACTCCACT
GAATGCTAGTTTTTTTATGT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 234; Mature: 234

Protein sequence:

>234_residues
MVLLGTVVNGILIIIGSILGLFFTKIPEKYKETVMSGIGLVVFLIGLQMAFETDQIIIVLLSLLTGALIGEFIGLEERLN
QLGEWVGHRVSTKSEETSIAQGFVTASLIFCIGAMAIIGALDSGIRGDHEVLMTKGVIDGFTSLVLTTTLGFGVILSVIP
VVVYQGLIALFATQIENWVSATFLDGLIVELTAVGGLLIVAIGLNLLNITNIRIGNLLPSIGTVIIIYSIVQFL

Sequences:

>Translated_234_residues
MVLLGTVVNGILIIIGSILGLFFTKIPEKYKETVMSGIGLVVFLIGLQMAFETDQIIIVLLSLLTGALIGEFIGLEERLN
QLGEWVGHRVSTKSEETSIAQGFVTASLIFCIGAMAIIGALDSGIRGDHEVLMTKGVIDGFTSLVLTTTLGFGVILSVIP
VVVYQGLIALFATQIENWVSATFLDGLIVELTAVGGLLIVAIGLNLLNITNIRIGNLLPSIGTVIIIYSIVQFL
>Mature_234_residues
MVLLGTVVNGILIIIGSILGLFFTKIPEKYKETVMSGIGLVVFLIGLQMAFETDQIIIVLLSLLTGALIGEFIGLEERLN
QLGEWVGHRVSTKSEETSIAQGFVTASLIFCIGAMAIIGALDSGIRGDHEVLMTKGVIDGFTSLVLTTTLGFGVILSVIP
VVVYQGLIALFATQIENWVSATFLDGLIVELTAVGGLLIVAIGLNLLNITNIRIGNLLPSIGTVIIIYSIVQFL

Specific function: Unknown

COG id: COG1811

COG function: function code R; Uncharacterized membrane protein, possible Na+ channel or pump

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1789338, Length=144, Percent_Identity=28.4722222222222, Blast_Score=69, Evalue=2e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007563 [H]

Pfam domain/function: PF04474 DUF554 [H]

EC number: NA

Molecular weight: Translated: 24873; Mature: 24873

Theoretical pI: Translated: 4.32; Mature: 4.32

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVLLGTVVNGILIIIGSILGLFFTKIPEKYKETVMSGIGLVVFLIGLQMAFETDQIIIVL
CEEHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHH
LSLLTGALIGEFIGLEERLNQLGEWVGHRVSTKSEETSIAQGFVTASLIFCIGAMAIIGA
HHHHHHHHHHHHHCHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
LDSGIRGDHEVLMTKGVIDGFTSLVLTTTLGFGVILSVIPVVVYQGLIALFATQIENWVS
HHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ATFLDGLIVELTAVGGLLIVAIGLNLLNITNIRIGNLLPSIGTVIIIYSIVQFL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHC
>Mature Secondary Structure
MVLLGTVVNGILIIIGSILGLFFTKIPEKYKETVMSGIGLVVFLIGLQMAFETDQIIIVL
CEEHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHH
LSLLTGALIGEFIGLEERLNQLGEWVGHRVSTKSEETSIAQGFVTASLIFCIGAMAIIGA
HHHHHHHHHHHHHCHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
LDSGIRGDHEVLMTKGVIDGFTSLVLTTTLGFGVILSVIPVVVYQGLIALFATQIENWVS
HHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ATFLDGLIVELTAVGGLLIVAIGLNLLNITNIRIGNLLPSIGTVIIIYSIVQFL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]