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The map label for this gene is ygeA [H]

Identifier: 23100846

GI number: 23100846

Start: 3529099

End: 3529794

Strand: Direct

Name: ygeA [H]

Synonym: OB3391

Alternate gene names: 23100846

Gene position: 3529099-3529794 (Clockwise)

Preceding gene: 23100844

Following gene: 23100848

Centisome position: 97.21

GC content: 35.2

Gene sequence:

>696_bases
ATGAAAACAATCGGGTTAATCGGTGGAATGAGCTGGGAGTCATCCAGTGAATATTACCGTATAATAAATGAAGAAGTGAA
AGCTAGATTAGGAGGATTACATTCTGCAAAATGCATTCTATATAGCGTAGATTTTGCTGACATCGAAAGGGATCAATCAT
TAGGTGATTGGAAAAGCGCAGGCCACAAATTAGCACATGCCGCACACTCATTAGAAAAAGCTGGAGCAGATTTTATTATT
ATTTGTACCAACACCATGCACAAGACCGTAGAAGACATCGAAAAAGCGATATCTATCCCCATACTACACATTGCAGATGC
AACTGCAACAAAGATTAAGTCCACAAACATAAACACAATTGGTTTGCTAGGAACAACCTACACCATGCAACACGATTTTT
ACAAAAATCGAATCAAAATGAGCGGGATAAATGTTATTATTCCTGACTCTGATGATATAAATAAATTAAACAAAATCATT
TTTGAAGAGCTTTGCTTAGGAATTATTAACGAACAATCCAAAGCGTATTATATTAGCGTAATAAATAATTTGATGAATCG
AGGAGCTGAAGGAATCATATTCGGATGTACGGAGATAGGATTATTAATTCAAGAAAAAGAACTGGACATTCCTATTTTTG
ATACCACAAAAATTCATGCACTCGATGCAGTGAATATAGCTTTGAAGATGGATTAA

Upstream 100 bases:

>100_bases
TTGTCAAAGTATTTTTAATTAGGTAGCTTTAGAAGGAAGGATAGAAATCTGATTTTTGAAAAATATAATTACCAAGCTGC
TTCTCTGAGGAGGGAAAAGA

Downstream 100 bases:

>100_bases
TTGCTTATTTATTGTTATTTTCTTTCCAATTGTACGGTATATTTATCCATTCCCAAGCAATATAACCTACGTATAGAAAA
ATTGGAAAAACAATAGTATA

Product: amino acid racemase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 231; Mature: 231

Protein sequence:

>231_residues
MKTIGLIGGMSWESSSEYYRIINEEVKARLGGLHSAKCILYSVDFADIERDQSLGDWKSAGHKLAHAAHSLEKAGADFII
ICTNTMHKTVEDIEKAISIPILHIADATATKIKSTNINTIGLLGTTYTMQHDFYKNRIKMSGINVIIPDSDDINKLNKII
FEELCLGIINEQSKAYYISVINNLMNRGAEGIIFGCTEIGLLIQEKELDIPIFDTTKIHALDAVNIALKMD

Sequences:

>Translated_231_residues
MKTIGLIGGMSWESSSEYYRIINEEVKARLGGLHSAKCILYSVDFADIERDQSLGDWKSAGHKLAHAAHSLEKAGADFII
ICTNTMHKTVEDIEKAISIPILHIADATATKIKSTNINTIGLLGTTYTMQHDFYKNRIKMSGINVIIPDSDDINKLNKII
FEELCLGIINEQSKAYYISVINNLMNRGAEGIIFGCTEIGLLIQEKELDIPIFDTTKIHALDAVNIALKMD
>Mature_231_residues
MKTIGLIGGMSWESSSEYYRIINEEVKARLGGLHSAKCILYSVDFADIERDQSLGDWKSAGHKLAHAAHSLEKAGADFII
ICTNTMHKTVEDIEKAISIPILHIADATATKIKSTNINTIGLLGTTYTMQHDFYKNRIKMSGINVIIPDSDDINKLNKII
FEELCLGIINEQSKAYYISVINNLMNRGAEGIIFGCTEIGLLIQEKELDIPIFDTTKIHALDAVNIALKMD

Specific function: Unknown

COG id: COG1794

COG function: function code M; Aspartate racemase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the aspartate/glutamate racemases family [H]

Homologues:

Organism=Escherichia coli, GI1789205, Length=229, Percent_Identity=54.585152838428, Blast_Score=266, Evalue=1e-72,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR015942
- InterPro:   IPR001920
- InterPro:   IPR018187
- InterPro:   IPR004380 [H]

Pfam domain/function: PF01177 Asp_Glu_race [H]

EC number: NA

Molecular weight: Translated: 25615; Mature: 25615

Theoretical pI: Translated: 5.84; Mature: 5.84

Prosite motif: PS00923 ASP_GLU_RACEMASE_1 ; PS00924 ASP_GLU_RACEMASE_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
4.8 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
4.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKTIGLIGGMSWESSSEYYRIINEEVKARLGGLHSAKCILYSVDFADIERDQSLGDWKSA
CCCEEEEECCCCCCCCHHHHHHHHHHHHHHCCCCCCEEEEEECCHHHCCCCCCCCHHHHH
GHKLAHAAHSLEKAGADFIIICTNTMHKTVEDIEKAISIPILHIADATATKIKSTNINTI
HHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHHHHHCCCEEEECCCCHHEEECCCCCEE
GLLGTTYTMQHDFYKNRIKMSGINVIIPDSDDINKLNKIIFEELCLGIINEQSKAYYISV
EEEECEEEEHHHHHHCEEEECCCEEEECCCCCHHHHHHHHHHHHHHHHHCCCCCEEHHHH
INNLMNRGAEGIIFGCTEIGLLIQEKELDIPIFDTTKIHALDAVNIALKMD
HHHHHHCCCCEEEEEHHHHCEEEEECCCCCCEECCCEEEEEEEEEEEEEEC
>Mature Secondary Structure
MKTIGLIGGMSWESSSEYYRIINEEVKARLGGLHSAKCILYSVDFADIERDQSLGDWKSA
CCCEEEEECCCCCCCCHHHHHHHHHHHHHHCCCCCCEEEEEECCHHHCCCCCCCCHHHHH
GHKLAHAAHSLEKAGADFIIICTNTMHKTVEDIEKAISIPILHIADATATKIKSTNINTI
HHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHHHHHCCCEEEECCCCHHEEECCCCCEE
GLLGTTYTMQHDFYKNRIKMSGINVIIPDSDDINKLNKIIFEELCLGIINEQSKAYYISV
EEEECEEEEHHHHHHCEEEECCCEEEECCCCCHHHHHHHHHHHHHHHHHCCCCCEEHHHH
INNLMNRGAEGIIFGCTEIGLLIQEKELDIPIFDTTKIHALDAVNIALKMD
HHHHHHCCCCEEEEEHHHHCEEEEECCCCCCEECCCEEEEEEEEEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 6350602; 2836407; 9278503 [H]