| Definition | Oceanobacillus iheyensis HTE831, complete genome. |
|---|---|
| Accession | NC_004193 |
| Length | 3,630,528 |
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The map label for this gene is 23100677
Identifier: 23100677
GI number: 23100677
Start: 3355616
End: 3357805
Strand: Reverse
Name: 23100677
Synonym: OB3222
Alternate gene names: NA
Gene position: 3357805-3355616 (Counterclockwise)
Preceding gene: 23100678
Following gene: 23100676
Centisome position: 92.49
GC content: 37.81
Gene sequence:
>2190_bases ATGCAACAAGTAAAAGCACTTACAACAGGAATGTTTTATACATATTTAAAAGAGCGAAATACGTATTCTAATGAAATCAT GCAATGTATAGAAAAATCGTTAGAACATCTATTACATTATGGCACTACAATGAACCGACCAGGGATGTTGCTTGGGAAAA TTCAAAGTGGGAAGACGCGAACATTTATTGGTTTGTCAGGCCTTGCGATGGATAATGGCTATGATGTAATCATTGTATTA ACAAAAGGTACCAGAGCTTTAGCAAGGCAAACATTACAACGGTTATATCAGGAGTTTGAAGGTATCGAAGATGAAGATGT CTTGCAAATTCATGATATTATGTCGATGCCAAACAATTTAATTGAATATGAATTACAGCAAAAACAAATGATCGTCGTGA AGAAAGAAACCAATAACTTGAAGCGTTTAGAAGAAGTTTTGTCGGTAAGCTATCCTGCCTTAGCAACTAAAAAAACATTA GTAATTGATGATGAGGCCGACTTTGCAAGCATTGGATTTTCTAAAACAAAGCGAGAGGTTACAGAAATCAACGTAATCGC CGGACAAATTGATAGGCTTCGCAGAAATTTAGCAGATGTTAGCTTCTTGCAAGTAACCGCAACACCATACTCACTTTATC TACAACCGGATACGTTAAAAGTAGACGGATCCTCGAAGGTTTTTCAGCCGGTGAAACCTGCATTTACAGAACTTGTGCCT GTTCCGAATGAATATATAGGTGGAAAATATTATTTTGAGGAAAGTGAAGCAGGAGATTCTATTTCTTCTCATATATATGA ACCGATTAACGAAGACGAATTAATGGCATTAAAAAAGCAGGACCGAAGAAGGTTTAAATTAGAGGAGGCGTTACATAGTA ACAAGATTTCTTCTCTTAGAAATTCAATTATTCATTTCGTTGTCGGAGGAGTCATGCGAAGGATTCAGCAAAAGCAGCAA GGAAGACGAATGAATAAGTATAGTTTTATTATCCATACGGAGCAGGCTAAGTTATCCCATGAGTGGCAAGAAACCATTAT CTTAGAAATAAAACGTCAGCTACAACAAGCTGCAGATGATCAACCAAAATTACTCTTGAATCTGATAAGAGCTTCATTCG AAAACATGAAAAAGTCCTTAATGATGCTAGGAGGTGACATTCCTTCTTTCGCCGAAGTGCAATTTGAATCATTATGGGCG CTGCAAAAAGATCATCTTTTGATATCAAAGGTAAATTCAGAAACGGATATAAACCAGCTTCTAGATAACACTGGTCAATT GAAACTAAGAGCTCCACTAAATATATTTATTGGCGGACAAATATTAGATAGAGGGATAACGATTGCAAACTTAATCGGCT TTTATTATGGAAGAAATCCTCGTCGCTTTCAGCAAGATACGGTCCTTCAGCATTCACGTATGTATGGATTTCGTCCTAAG GAAGACTTAGCCGTAACAAGATTTTATACAACGAAAGAAATTTATCATGTCATGAGGAAAATATATGAATTTGATACAGG GTTGCGAAAGGCTTTTGAACAAGGTGGACAAGATCAAGGGGTTGTCTTTATTCAACAAGACCAGCAAAATGAAATTATTC CCTGCAGCCCTAATAAATTATTACTATCAAAAACAACAACATTACGCTCATATAAACGAATGCTTCCCGTTGGGTTTCAA ACTAGATATAAAACGTACATCAGCCAAACCATTGATAAGCTAGATCGTGCGATTGGGGCAAGTGGAAAGGCTGACGGCGT TGCTTTCTTAATACGACTTGATAACGCGAAGAAAATTATACGAACCATCGCCAAAACATTTGATGACAATACAGATTCGT CTTGGGATGTAAAAGCTTTCCTAGCAAGTATGGAATATTTGTCTCAGCACACCGATTCCACTTATCAAGGGCATGTATGG TGTATTGTGAAGCGAGGCAGAAATATGAGCAGGATTCGACCTGGTTCGAATCGTTATGAGGATGCTCCAGATACTCCCGC TGGAGAAAAGGGAGAGTTAAGAATAGCAAAACAAGTAGCTACAGACATTCCTGCCTTACTCTTATTACGTCAAAATGGAG AGGAAGAAAAAGGTTGGCGGGGAACGCCGTTTTGGTGGCCAGTGTTGGTTGCGCCAAAAAATACAAAAACAGTAGTGTTT ACGAGTGAATCATTACATGAACAAGATTGA
Upstream 100 bases:
>100_bases CGCTTGCGCTTTTGTTATTGACTAAAATTTCTATAGTTGTTTTTTATAATAAGTAAAACTATACTTTATCACGGTGACTA TAGAAACAGCGGAGGAATTT
Downstream 100 bases:
>100_bases GTCGAGTTTCGAGGACTGCTGTATTTTCCTATTTTAATAAGTAGCTAACAACCAACTTTACAAAGGCTATAACAAATGGT AAAAGTAGAATAATATTATT
Product: hypothetical protein
Products: NA
Alternate protein names: Endonuclease Z1 Domain; Stress-Sensitive Restriction System Protein; Endonuclease Z1 Domain Protein; Helicase
Number of amino acids: Translated: 729; Mature: 729
Protein sequence:
>729_residues MQQVKALTTGMFYTYLKERNTYSNEIMQCIEKSLEHLLHYGTTMNRPGMLLGKIQSGKTRTFIGLSGLAMDNGYDVIIVL TKGTRALARQTLQRLYQEFEGIEDEDVLQIHDIMSMPNNLIEYELQQKQMIVVKKETNNLKRLEEVLSVSYPALATKKTL VIDDEADFASIGFSKTKREVTEINVIAGQIDRLRRNLADVSFLQVTATPYSLYLQPDTLKVDGSSKVFQPVKPAFTELVP VPNEYIGGKYYFEESEAGDSISSHIYEPINEDELMALKKQDRRRFKLEEALHSNKISSLRNSIIHFVVGGVMRRIQQKQQ GRRMNKYSFIIHTEQAKLSHEWQETIILEIKRQLQQAADDQPKLLLNLIRASFENMKKSLMMLGGDIPSFAEVQFESLWA LQKDHLLISKVNSETDINQLLDNTGQLKLRAPLNIFIGGQILDRGITIANLIGFYYGRNPRRFQQDTVLQHSRMYGFRPK EDLAVTRFYTTKEIYHVMRKIYEFDTGLRKAFEQGGQDQGVVFIQQDQQNEIIPCSPNKLLLSKTTTLRSYKRMLPVGFQ TRYKTYISQTIDKLDRAIGASGKADGVAFLIRLDNAKKIIRTIAKTFDDNTDSSWDVKAFLASMEYLSQHTDSTYQGHVW CIVKRGRNMSRIRPGSNRYEDAPDTPAGEKGELRIAKQVATDIPALLLLRQNGEEEKGWRGTPFWWPVLVAPKNTKTVVF TSESLHEQD
Sequences:
>Translated_729_residues MQQVKALTTGMFYTYLKERNTYSNEIMQCIEKSLEHLLHYGTTMNRPGMLLGKIQSGKTRTFIGLSGLAMDNGYDVIIVL TKGTRALARQTLQRLYQEFEGIEDEDVLQIHDIMSMPNNLIEYELQQKQMIVVKKETNNLKRLEEVLSVSYPALATKKTL VIDDEADFASIGFSKTKREVTEINVIAGQIDRLRRNLADVSFLQVTATPYSLYLQPDTLKVDGSSKVFQPVKPAFTELVP VPNEYIGGKYYFEESEAGDSISSHIYEPINEDELMALKKQDRRRFKLEEALHSNKISSLRNSIIHFVVGGVMRRIQQKQQ GRRMNKYSFIIHTEQAKLSHEWQETIILEIKRQLQQAADDQPKLLLNLIRASFENMKKSLMMLGGDIPSFAEVQFESLWA LQKDHLLISKVNSETDINQLLDNTGQLKLRAPLNIFIGGQILDRGITIANLIGFYYGRNPRRFQQDTVLQHSRMYGFRPK EDLAVTRFYTTKEIYHVMRKIYEFDTGLRKAFEQGGQDQGVVFIQQDQQNEIIPCSPNKLLLSKTTTLRSYKRMLPVGFQ TRYKTYISQTIDKLDRAIGASGKADGVAFLIRLDNAKKIIRTIAKTFDDNTDSSWDVKAFLASMEYLSQHTDSTYQGHVW CIVKRGRNMSRIRPGSNRYEDAPDTPAGEKGELRIAKQVATDIPALLLLRQNGEEEKGWRGTPFWWPVLVAPKNTKTVVF TSESLHEQD >Mature_729_residues MQQVKALTTGMFYTYLKERNTYSNEIMQCIEKSLEHLLHYGTTMNRPGMLLGKIQSGKTRTFIGLSGLAMDNGYDVIIVL TKGTRALARQTLQRLYQEFEGIEDEDVLQIHDIMSMPNNLIEYELQQKQMIVVKKETNNLKRLEEVLSVSYPALATKKTL VIDDEADFASIGFSKTKREVTEINVIAGQIDRLRRNLADVSFLQVTATPYSLYLQPDTLKVDGSSKVFQPVKPAFTELVP VPNEYIGGKYYFEESEAGDSISSHIYEPINEDELMALKKQDRRRFKLEEALHSNKISSLRNSIIHFVVGGVMRRIQQKQQ GRRMNKYSFIIHTEQAKLSHEWQETIILEIKRQLQQAADDQPKLLLNLIRASFENMKKSLMMLGGDIPSFAEVQFESLWA LQKDHLLISKVNSETDINQLLDNTGQLKLRAPLNIFIGGQILDRGITIANLIGFYYGRNPRRFQQDTVLQHSRMYGFRPK EDLAVTRFYTTKEIYHVMRKIYEFDTGLRKAFEQGGQDQGVVFIQQDQQNEIIPCSPNKLLLSKTTTLRSYKRMLPVGFQ TRYKTYISQTIDKLDRAIGASGKADGVAFLIRLDNAKKIIRTIAKTFDDNTDSSWDVKAFLASMEYLSQHTDSTYQGHVW CIVKRGRNMSRIRPGSNRYEDAPDTPAGEKGELRIAKQVATDIPALLLLRQNGEEEKGWRGTPFWWPVLVAPKNTKTVVF TSESLHEQD
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 83577; Mature: 83577
Theoretical pI: Translated: 9.32; Mature: 9.32
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQQVKALTTGMFYTYLKERNTYSNEIMQCIEKSLEHLLHYGTTMNRPGMLLGKIQSGKTR CCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCEE TFIGLSGLAMDNGYDVIIVLTKGTRALARQTLQRLYQEFEGIEDEDVLQIHDIMSMPNNL EEEEEECEEECCCCEEEEEEECCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCHH IEYELQQKQMIVVKKETNNLKRLEEVLSVSYPALATKKTLVIDDEADFASIGFSKTKREV HHHHHCCCEEEEEEECCCHHHHHHHHHHCCCCCCCCCCEEEEECCCCHHHCCCHHHHHHH TEINVIAGQIDRLRRNLADVSFLQVTATPYSLYLQPDTLKVDGSSKVFQPVKPAFTELVP HHHHHHHHHHHHHHHHHCCCEEEEEEECCEEEEECCCEEEECCCCCCCCCCCHHHHHHCC VPNEYIGGKYYFEESEAGDSISSHIYEPINEDELMALKKQDRRRFKLEEALHSNKISSLR CCCHHCCCEEEECCCCCCCHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH NSIIHFVVGGVMRRIQQKQQGRRMNKYSFIIHTEQAKLSHEWQETIILEIKRQLQQAADD HHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEECHHHHHHHHHHHHHHHHHHHHHHHCCC QPKLLLNLIRASFENMKKSLMMLGGDIPSFAEVQFESLWALQKDHLLISKVNSETDINQL CHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCEEEEECCCCHHHHHH LDNTGQLKLRAPLNIFIGGQILDRGITIANLIGFYYGRNPRRFQQDTVLQHSRMYGFRPK HCCCCCEEEECCEEEEECCHHHHCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCC EDLAVTRFYTTKEIYHVMRKIYEFDTGLRKAFEQGGQDQGVVFIQQDQQNEIIPCSPNKL CCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCEECCCCCCE LLSKTTTLRSYKRMLPVGFQTRYKTYISQTIDKLDRAIGASGKADGVAFLIRLDNAKKII EEEHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEECCHHHHH RTIAKTFDDNTDSSWDVKAFLASMEYLSQHTDSTYQGHVWCIVKRGRNMSRIRPGSNRYE HHHHHHHCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCEEEEEEECCCCCCCCCCCCCCCC DAPDTPAGEKGELRIAKQVATDIPALLLLRQNGEEEKGWRGTPFWWPVLVAPKNTKTVVF CCCCCCCCCCCCHHHHHHHHHCCHHEEEEECCCCCCCCCCCCCCEEEEEEECCCCCEEEE TSESLHEQD ECHHCCCCC >Mature Secondary Structure MQQVKALTTGMFYTYLKERNTYSNEIMQCIEKSLEHLLHYGTTMNRPGMLLGKIQSGKTR CCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCEE TFIGLSGLAMDNGYDVIIVLTKGTRALARQTLQRLYQEFEGIEDEDVLQIHDIMSMPNNL EEEEEECEEECCCCEEEEEEECCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCHH IEYELQQKQMIVVKKETNNLKRLEEVLSVSYPALATKKTLVIDDEADFASIGFSKTKREV HHHHHCCCEEEEEEECCCHHHHHHHHHHCCCCCCCCCCEEEEECCCCHHHCCCHHHHHHH TEINVIAGQIDRLRRNLADVSFLQVTATPYSLYLQPDTLKVDGSSKVFQPVKPAFTELVP HHHHHHHHHHHHHHHHHCCCEEEEEEECCEEEEECCCEEEECCCCCCCCCCCHHHHHHCC VPNEYIGGKYYFEESEAGDSISSHIYEPINEDELMALKKQDRRRFKLEEALHSNKISSLR CCCHHCCCEEEECCCCCCCHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH NSIIHFVVGGVMRRIQQKQQGRRMNKYSFIIHTEQAKLSHEWQETIILEIKRQLQQAADD HHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEECHHHHHHHHHHHHHHHHHHHHHHHCCC QPKLLLNLIRASFENMKKSLMMLGGDIPSFAEVQFESLWALQKDHLLISKVNSETDINQL CHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCEEEEECCCCHHHHHH LDNTGQLKLRAPLNIFIGGQILDRGITIANLIGFYYGRNPRRFQQDTVLQHSRMYGFRPK HCCCCCEEEECCEEEEECCHHHHCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCC EDLAVTRFYTTKEIYHVMRKIYEFDTGLRKAFEQGGQDQGVVFIQQDQQNEIIPCSPNKL CCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCEECCCCCCE LLSKTTTLRSYKRMLPVGFQTRYKTYISQTIDKLDRAIGASGKADGVAFLIRLDNAKKII EEEHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEECCHHHHH RTIAKTFDDNTDSSWDVKAFLASMEYLSQHTDSTYQGHVWCIVKRGRNMSRIRPGSNRYE HHHHHHHCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCEEEEEEECCCCCCCCCCCCCCCC DAPDTPAGEKGELRIAKQVATDIPALLLLRQNGEEEKGWRGTPFWWPVLVAPKNTKTVVF CCCCCCCCCCCCHHHHHHHHHCCHHEEEEECCCCCCCCCCCCCCEEEEEEECCCCCEEEE TSESLHEQD ECHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA