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The map label for this gene is ytcP [H]

Identifier: 23100663

GI number: 23100663

Start: 3338943

End: 3339839

Strand: Reverse

Name: ytcP [H]

Synonym: OB3208

Alternate gene names: 23100663

Gene position: 3339839-3338943 (Counterclockwise)

Preceding gene: 23100664

Following gene: 23100662

Centisome position: 91.99

GC content: 36.79

Gene sequence:

>897_bases
ATGTCTAGATTTAGTTTATCGGATAAGGCCTTTGACCGGTTAAATATACTTTTTGTATCGATTATTACAATAATCGTCAT
TTATCCGCTTATTTTTGTGCTGAGCGCATCCATTAGTGATCCTCAAGCTGTGAACACTGGGAAGATGTGGCTTTGGCCAG
TGGATATTACCTTTGATGGGTTCCAACGAGTATTCCAAAATGATGCGATTTGGACGGGATATAAAAATACGATCTTATAC
ACAATTGTTGGTGTGCTCATCCATTTGTTTGTTTTATTGCCGGCAGCATATGCCTTATCCCGCAAAGAATTAATGGGGAA
GAAATTTTGGTTATGGTTTATTTTATTCACGATGCTATTTAATGGAGGACTTATTCCAACGTACTTAGTTGTTCGTAATT
TGCAAATGCTCGATACAATGTGGGCGATTGTTATTCCAGGGGTTGTGGGAGCTTGGTCGATTCTTGTTGCGCGAACCTTC
TTCCAACAAACTATTCCAGATCAACTTGTCGAAGCGTCCAAAATTGATGGAGCAAGTGACTTTTACTTATTTATTAAGGT
AGTTTTACCGTTATCATTACCAATTATTGCTGTAATGGCACTTTTTCATGGAGTTGCCTTATGGAATCAGTACTTTAATG
CGTTGATTTATTTACGTACAGAAGATAAATTCCCATTACAGCTAATACTTCGGCAAATTTTGATCTTGAATGAAGTGAAT
GCAAGTAGTATTTCCAATGCTGCTGGTTCTGCTCAATCGTTTGCAGAGCAAGTAAAAACAGCTTCATTAGTAAAATATGC
AGTGATCATCGTTTCTGCACTACCACTATTAATTGTATATCCATTTTTACAACGTTTCTTTGTAAAAGGAGTTCTGATAG
GTTCTGTAAAGGAATAA

Upstream 100 bases:

>100_bases
GTTGTTTGAATCAGCGATTAATATTGTTCTACTAATTACCGTTAACCAAATCGCACGAAAAGTTAGTGAGAACAGCTTAT
GGTAGGAAGGAGGATGCAAT

Downstream 100 bases:

>100_bases
CTGAAATGAGGCAAAACACGGTGTAAGAAGTGAACACCTGCTTTTGTCTACATTTCAATTATTGAATTCACATAGTGAGG
TGATTTAGATGACGAGTATC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 298; Mature: 297

Protein sequence:

>298_residues
MSRFSLSDKAFDRLNILFVSIITIIVIYPLIFVLSASISDPQAVNTGKMWLWPVDITFDGFQRVFQNDAIWTGYKNTILY
TIVGVLIHLFVLLPAAYALSRKELMGKKFWLWFILFTMLFNGGLIPTYLVVRNLQMLDTMWAIVIPGVVGAWSILVARTF
FQQTIPDQLVEASKIDGASDFYLFIKVVLPLSLPIIAVMALFHGVALWNQYFNALIYLRTEDKFPLQLILRQILILNEVN
ASSISNAAGSAQSFAEQVKTASLVKYAVIIVSALPLLIVYPFLQRFFVKGVLIGSVKE

Sequences:

>Translated_298_residues
MSRFSLSDKAFDRLNILFVSIITIIVIYPLIFVLSASISDPQAVNTGKMWLWPVDITFDGFQRVFQNDAIWTGYKNTILY
TIVGVLIHLFVLLPAAYALSRKELMGKKFWLWFILFTMLFNGGLIPTYLVVRNLQMLDTMWAIVIPGVVGAWSILVARTF
FQQTIPDQLVEASKIDGASDFYLFIKVVLPLSLPIIAVMALFHGVALWNQYFNALIYLRTEDKFPLQLILRQILILNEVN
ASSISNAAGSAQSFAEQVKTASLVKYAVIIVSALPLLIVYPFLQRFFVKGVLIGSVKE
>Mature_297_residues
SRFSLSDKAFDRLNILFVSIITIIVIYPLIFVLSASISDPQAVNTGKMWLWPVDITFDGFQRVFQNDAIWTGYKNTILYT
IVGVLIHLFVLLPAAYALSRKELMGKKFWLWFILFTMLFNGGLIPTYLVVRNLQMLDTMWAIVIPGVVGAWSILVARTFF
QQTIPDQLVEASKIDGASDFYLFIKVVLPLSLPIIAVMALFHGVALWNQYFNALIYLRTEDKFPLQLILRQILILNEVNA
SSISNAAGSAQSFAEQVKTASLVKYAVIIVSALPLLIVYPFLQRFFVKGVLIGSVKE

Specific function: Probably part of a binding-protein-dependent transport system. Probably responsible for the translocation of the substrate across the membrane [H]

COG id: COG0395

COG function: function code G; ABC-type sugar transport system, permease component

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-1 domain [H]

Homologues:

Organism=Escherichia coli, GI1789860, Length=281, Percent_Identity=27.4021352313167, Blast_Score=81, Evalue=1e-16,
Organism=Escherichia coli, GI1787571, Length=282, Percent_Identity=24.468085106383, Blast_Score=61, Evalue=7e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000515 [H]

Pfam domain/function: PF00528 BPD_transp_1 [H]

EC number: NA

Molecular weight: Translated: 33612; Mature: 33481

Theoretical pI: Translated: 9.74; Mature: 9.74

Prosite motif: PS50928 ABC_TM1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSRFSLSDKAFDRLNILFVSIITIIVIYPLIFVLSASISDPQAVNTGKMWLWPVDITFDG
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEEECCHHH
FQRVFQNDAIWTGYKNTILYTIVGVLIHLFVLLPAAYALSRKELMGKKFWLWFILFTMLF
HHHHHCCCCEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
NGGLIPTYLVVRNLQMLDTMWAIVIPGVVGAWSILVARTFFQQTIPDQLVEASKIDGASD
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHH
FYLFIKVVLPLSLPIIAVMALFHGVALWNQYFNALIYLRTEDKFPLQLILRQILILNEVN
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEECCCCCCHHHHHHHHHHHHCCC
ASSISNAAGSAQSFAEQVKTASLVKYAVIIVSALPLLIVYPFLQRFFVKGVLIGSVKE
HHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure 
SRFSLSDKAFDRLNILFVSIITIIVIYPLIFVLSASISDPQAVNTGKMWLWPVDITFDG
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEEECCHHH
FQRVFQNDAIWTGYKNTILYTIVGVLIHLFVLLPAAYALSRKELMGKKFWLWFILFTMLF
HHHHHCCCCEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
NGGLIPTYLVVRNLQMLDTMWAIVIPGVVGAWSILVARTFFQQTIPDQLVEASKIDGASD
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHH
FYLFIKVVLPLSLPIIAVMALFHGVALWNQYFNALIYLRTEDKFPLQLILRQILILNEVN
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEECCCCCCHHHHHHHHHHHHCCC
ASSISNAAGSAQSFAEQVKTASLVKYAVIIVSALPLLIVYPFLQRFFVKGVLIGSVKE
HHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9387221; 9384377; 8763940 [H]