BacMap

Definition	Oceanobacillus iheyensis HTE831, complete genome.
Accession	NC_004193
Length	3,630,528

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The map label for this gene is ythP [H]

Identifier: 23100630

GI number: 23100630

Start: 3306722

End: 3307444

Strand: Direct

Name: ythP [H]

Synonym: OB3175

Alternate gene names: 23100630

Gene position: 3306722-3307444 (Clockwise)

Preceding gene: 23100628

Following gene: 23100631

Centisome position: 91.08

GC content: 36.38

Gene sequence:

>723_bases
ATGATTGAAGTAAAAATCAACCATGCTGGATATCATTTAGAACAATTATATTTATCGGATATCCACTTTTCTATCCCACC
TGGAGAAACTGTTGGTTTACTAGGAGCTAACGGTGCAGGAAAAAGCACGACCATTAAGTCGATTATCGGAACGATCGAAG
CATTTGATGGAGAAATACATATTAAAGATGGTCATCGACTTGCATATATACCAGAGGAACCTATCCTATACGATCACCTC
ACACTTTGGGAACATCTACGTTTAGCAGCCACTTCTTATGATTTACCCGATGAGCAATGGATTCCAAAAGCAGAGGAACT
CCTAAAACTATTTTTATTAACAGGAAAAGAACATCATTTCCCCGTACATTTTTCAAAAGGAATGAAACAGAAATCATTAA
TTGTCTTAAGCTTTATGATAAAAGCAGATATTTATATTATTGATGAGCCATTTATTGGATTGGACCCAATCGCTACGAAA
AACCTGATTACATTGTTGGAACAGGAAAAACAACGTGGTGCTGCTATTCTAATGACCACCCATGTACTAGACTCTGCTGA
GAAACTCTGTGATACATTCGTCCTTCTACATGAGGGAAGAATGCTATTTAAAGGGAATCTAATTGAATTACAACAAAGAA
CAAATCAAACGTTAGACACTTCTTTATTAGATTGCTTCTATTATTTGTTAGAGGAGGAAGTAGCGAATGAACCCCGCCTT
TAA

Upstream 100 bases:

>100_bases
ATAATTGAGAAAAGTCAGAATCAACTATGTAATGTAAAATTTCTAGTAAAAATCCCCAAAGAAATAACACACTAAAATAA
GAATATATTGGAGGACGCCT

Downstream 100 bases:

>100_bases
TGTGTTTAAACAAAGGCTTAGAACGGATTTAAAACAACAACGAAAAGCACGAAATATGGTATTGGATTGGACCATATTCG
TCTATGCCCTTATACCAGGA

Product: ABC transporter ATP-binding protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 240; Mature: 240

Protein sequence:

>240_residues
MIEVKINHAGYHLEQLYLSDIHFSIPPGETVGLLGANGAGKSTTIKSIIGTIEAFDGEIHIKDGHRLAYIPEEPILYDHL
TLWEHLRLAATSYDLPDEQWIPKAEELLKLFLLTGKEHHFPVHFSKGMKQKSLIVLSFMIKADIYIIDEPFIGLDPIATK
NLITLLEQEKQRGAAILMTTHVLDSAEKLCDTFVLLHEGRMLFKGNLIELQQRTNQTLDTSLLDCFYYLLEEEVANEPRL

Sequences:

>Translated_240_residues
MIEVKINHAGYHLEQLYLSDIHFSIPPGETVGLLGANGAGKSTTIKSIIGTIEAFDGEIHIKDGHRLAYIPEEPILYDHL
TLWEHLRLAATSYDLPDEQWIPKAEELLKLFLLTGKEHHFPVHFSKGMKQKSLIVLSFMIKADIYIIDEPFIGLDPIATK
NLITLLEQEKQRGAAILMTTHVLDSAEKLCDTFVLLHEGRMLFKGNLIELQQRTNQTLDTSLLDCFYYLLEEEVANEPRL
>Mature_240_residues
MIEVKINHAGYHLEQLYLSDIHFSIPPGETVGLLGANGAGKSTTIKSIIGTIEAFDGEIHIKDGHRLAYIPEEPILYDHL
TLWEHLRLAATSYDLPDEQWIPKAEELLKLFLLTGKEHHFPVHFSKGMKQKSLIVLSFMIKADIYIIDEPFIGLDPIATK
NLITLLEQEKQRGAAILMTTHVLDSAEKLCDTFVLLHEGRMLFKGNLIELQQRTNQTLDTSLLDCFYYLLEEEVANEPRL

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Integral Membrane Protein. Inner Membrane [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transporter domain [H]

Homologues:

Organism=Homo sapiens, GI27881501, Length=213, Percent_Identity=29.5774647887324, Blast_Score=102, Evalue=3e-22,
Organism=Homo sapiens, GI30795238, Length=213, Percent_Identity=29.5774647887324, Blast_Score=102, Evalue=3e-22,
Organism=Homo sapiens, GI27436953, Length=203, Percent_Identity=33.4975369458128, Blast_Score=102, Evalue=4e-22,
Organism=Homo sapiens, GI153792144, Length=231, Percent_Identity=31.6017316017316, Blast_Score=101, Evalue=7e-22,
Organism=Homo sapiens, GI31657092, Length=211, Percent_Identity=30.8056872037915, Blast_Score=100, Evalue=2e-21,
Organism=Homo sapiens, GI27477115, Length=241, Percent_Identity=28.6307053941909, Blast_Score=98, Evalue=6e-21,
Organism=Homo sapiens, GI6005701, Length=230, Percent_Identity=31.304347826087, Blast_Score=97, Evalue=1e-20,
Organism=Homo sapiens, GI116734710, Length=208, Percent_Identity=28.3653846153846, Blast_Score=90, Evalue=2e-18,
Organism=Homo sapiens, GI150417984, Length=202, Percent_Identity=30.1980198019802, Blast_Score=89, Evalue=3e-18,
Organism=Homo sapiens, GI21536376, Length=203, Percent_Identity=26.1083743842365, Blast_Score=88, Evalue=8e-18,
Organism=Homo sapiens, GI47078218, Length=199, Percent_Identity=28.1407035175879, Blast_Score=87, Evalue=2e-17,
Organism=Homo sapiens, GI45446740, Length=199, Percent_Identity=28.1407035175879, Blast_Score=87, Evalue=2e-17,
Organism=Homo sapiens, GI27262624, Length=210, Percent_Identity=29.5238095238095, Blast_Score=84, Evalue=1e-16,
Organism=Homo sapiens, GI27262626, Length=210, Percent_Identity=29.5238095238095, Blast_Score=84, Evalue=1e-16,
Organism=Homo sapiens, GI105990541, Length=199, Percent_Identity=28.643216080402, Blast_Score=83, Evalue=3e-16,
Organism=Homo sapiens, GI215820660, Length=196, Percent_Identity=27.5510204081633, Blast_Score=67, Evalue=2e-11,
Organism=Homo sapiens, GI20143975, Length=196, Percent_Identity=27.5510204081633, Blast_Score=67, Evalue=2e-11,
Organism=Escherichia coli, GI48994943, Length=223, Percent_Identity=30.0448430493274, Blast_Score=107, Evalue=7e-25,
Organism=Escherichia coli, GI87081782, Length=232, Percent_Identity=28.448275862069, Blast_Score=98, Evalue=4e-22,
Organism=Escherichia coli, GI1789593, Length=219, Percent_Identity=24.6575342465753, Blast_Score=90, Evalue=1e-19,
Organism=Escherichia coli, GI1786398, Length=222, Percent_Identity=25.6756756756757, Blast_Score=86, Evalue=2e-18,
Organism=Escherichia coli, GI1788225, Length=249, Percent_Identity=27.3092369477912, Blast_Score=85, Evalue=3e-18,
Organism=Escherichia coli, GI1786319, Length=195, Percent_Identity=28.2051282051282, Blast_Score=81, Evalue=5e-17,
Organism=Escherichia coli, GI1787089, Length=208, Percent_Identity=25.4807692307692, Blast_Score=80, Evalue=8e-17,
Organism=Escherichia coli, GI48994883, Length=223, Percent_Identity=26.0089686098655, Blast_Score=80, Evalue=1e-16,
Organism=Escherichia coli, GI1787029, Length=221, Percent_Identity=26.2443438914027, Blast_Score=78, Evalue=5e-16,
Organism=Escherichia coli, GI1789672, Length=201, Percent_Identity=27.8606965174129, Blast_Score=77, Evalue=1e-15,
Organism=Escherichia coli, GI1787759, Length=259, Percent_Identity=23.5521235521236, Blast_Score=75, Evalue=6e-15,
Organism=Escherichia coli, GI1788761, Length=200, Percent_Identity=26.5, Blast_Score=74, Evalue=9e-15,
Organism=Escherichia coli, GI1787105, Length=192, Percent_Identity=27.0833333333333, Blast_Score=73, Evalue=2e-14,
Organism=Escherichia coli, GI1787792, Length=205, Percent_Identity=27.3170731707317, Blast_Score=72, Evalue=2e-14,
Organism=Escherichia coli, GI87081709, Length=217, Percent_Identity=24.4239631336406, Blast_Score=72, Evalue=3e-14,
Organism=Escherichia coli, GI1788450, Length=210, Percent_Identity=27.1428571428571, Blast_Score=70, Evalue=2e-13,
Organism=Escherichia coli, GI1789032, Length=207, Percent_Identity=25.6038647342995, Blast_Score=69, Evalue=3e-13,
Organism=Escherichia coli, GI1786253, Length=199, Percent_Identity=25.1256281407035, Blast_Score=69, Evalue=4e-13,
Organism=Escherichia coli, GI1789890, Length=252, Percent_Identity=23.8095238095238, Blast_Score=68, Evalue=5e-13,
Organism=Escherichia coli, GI87082268, Length=200, Percent_Identity=26, Blast_Score=67, Evalue=1e-12,
Organism=Escherichia coli, GI1789991, Length=235, Percent_Identity=25.1063829787234, Blast_Score=66, Evalue=2e-12,
Organism=Escherichia coli, GI1788165, Length=171, Percent_Identity=26.3157894736842, Blast_Score=66, Evalue=3e-12,
Organism=Escherichia coli, GI1786872, Length=185, Percent_Identity=26.4864864864865, Blast_Score=65, Evalue=3e-12,
Organism=Escherichia coli, GI87081791, Length=202, Percent_Identity=23.7623762376238, Blast_Score=65, Evalue=4e-12,
Organism=Escherichia coli, GI1786345, Length=214, Percent_Identity=23.8317757009346, Blast_Score=65, Evalue=4e-12,
Organism=Escherichia coli, GI1787370, Length=195, Percent_Identity=23.5897435897436, Blast_Score=65, Evalue=4e-12,
Organism=Escherichia coli, GI1790467, Length=211, Percent_Identity=27.9620853080569, Blast_Score=63, Evalue=2e-11,
Organism=Escherichia coli, GI1787547, Length=206, Percent_Identity=24.2718446601942, Blast_Score=63, Evalue=2e-11,
Organism=Escherichia coli, GI1789751, Length=212, Percent_Identity=30.188679245283, Blast_Score=62, Evalue=3e-11,
Organism=Escherichia coli, GI1788644, Length=198, Percent_Identity=21.7171717171717, Blast_Score=62, Evalue=3e-11,
Organism=Escherichia coli, GI1788506, Length=221, Percent_Identity=25.3393665158371, Blast_Score=62, Evalue=3e-11,
Organism=Escherichia coli, GI1789873, Length=200, Percent_Identity=28, Blast_Score=61, Evalue=5e-11,
Organism=Escherichia coli, GI1790190, Length=207, Percent_Identity=24.6376811594203, Blast_Score=61, Evalue=6e-11,
Organism=Caenorhabditis elegans, GI17510237, Length=200, Percent_Identity=34, Blast_Score=103, Evalue=8e-23,
Organism=Caenorhabditis elegans, GI71983523, Length=196, Percent_Identity=33.1632653061224, Blast_Score=102, Evalue=2e-22,
Organism=Caenorhabditis elegans, GI71983516, Length=196, Percent_Identity=33.1632653061224, Blast_Score=102, Evalue=2e-22,
Organism=Caenorhabditis elegans, GI71983510, Length=196, Percent_Identity=33.1632653061224, Blast_Score=102, Evalue=2e-22,
Organism=Caenorhabditis elegans, GI115533608, Length=213, Percent_Identity=32.3943661971831, Blast_Score=99, Evalue=2e-21,
Organism=Caenorhabditis elegans, GI17565586, Length=211, Percent_Identity=28.436018957346, Blast_Score=92, Evalue=2e-19,
Organism=Drosophila melanogaster, GI24666092, Length=224, Percent_Identity=28.125, Blast_Score=98, Evalue=4e-21,
Organism=Drosophila melanogaster, GI116007184, Length=202, Percent_Identity=30.1980198019802, Blast_Score=89, Evalue=3e-18,
Organism=Drosophila melanogaster, GI221500365, Length=202, Percent_Identity=30.1980198019802, Blast_Score=89, Evalue=3e-18,
Organism=Drosophila melanogaster, GI28573573, Length=199, Percent_Identity=30.6532663316583, Blast_Score=86, Evalue=2e-17,
Organism=Drosophila melanogaster, GI28573571, Length=199, Percent_Identity=30.6532663316583, Blast_Score=86, Evalue=2e-17,
Organism=Drosophila melanogaster, GI221512771, Length=216, Percent_Identity=26.3888888888889, Blast_Score=86, Evalue=3e-17,
Organism=Drosophila melanogaster, GI24643674, Length=195, Percent_Identity=29.7435897435897, Blast_Score=85, Evalue=3e-17,
Organism=Drosophila melanogaster, GI28574150, Length=202, Percent_Identity=28.2178217821782, Blast_Score=84, Evalue=1e-16,
Organism=Drosophila melanogaster, GI116007328, Length=202, Percent_Identity=28.2178217821782, Blast_Score=83, Evalue=1e-16,
Organism=Drosophila melanogaster, GI85725262, Length=229, Percent_Identity=28.3842794759825, Blast_Score=79, Evalue=2e-15,
Organism=Drosophila melanogaster, GI24650855, Length=197, Percent_Identity=25.3807106598985, Blast_Score=76, Evalue=2e-14,
Organism=Drosophila melanogaster, GI24650853, Length=197, Percent_Identity=25.3807106598985, Blast_Score=76, Evalue=2e-14,
Organism=Drosophila melanogaster, GI24582014, Length=200, Percent_Identity=26, Blast_Score=72, Evalue=3e-13,
Organism=Drosophila melanogaster, GI24582012, Length=200, Percent_Identity=26, Blast_Score=72, Evalue=3e-13,
Organism=Drosophila melanogaster, GI281362751, Length=197, Percent_Identity=25.3807106598985, Blast_Score=71, Evalue=5e-13,
Organism=Drosophila melanogaster, GI24648314, Length=206, Percent_Identity=23.3009708737864, Blast_Score=71, Evalue=6e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003439
- InterPro:   IPR017871
- InterPro:   IPR003593 [H]

Pfam domain/function: PF00005 ABC_tran [H]

EC number: NA

Molecular weight: Translated: 27275; Mature: 27275

Theoretical pI: Translated: 5.15; Mature: 5.15

Prosite motif: PS50893 ABC_TRANSPORTER_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIEVKINHAGYHLEQLYLSDIHFSIPPGETVGLLGANGAGKSTTIKSIIGTIEAFDGEIH
CEEEEEECCCCCHHHEEEEHEEEECCCCCEEEEEECCCCCCHHHHHHHHHHHHHCCCEEE
IKDGHRLAYIPEEPILYDHLTLWEHLRLAATSYDLPDEQWIPKAEELLKLFLLTGKEHHF
EECCCEEEECCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHCCCCCCC
PVHFSKGMKQKSLIVLSFMIKADIYIIDEPFIGLDPIATKNLITLLEQEKQRGAAILMTT
CEEHHCCCCHHHHHEEEEEHHCCEEEEECCCCCCCCCHHHHHHHHHHHHHHCCCEEEEEH
HVLDSAEKLCDTFVLLHEGRMLFKGNLIELQQRTNQTLDTSLLDCFYYLLEEEVANEPRL
HHHHHHHHHHHHHHHHHCCCEEEECCEEHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCC
>Mature Secondary Structure
MIEVKINHAGYHLEQLYLSDIHFSIPPGETVGLLGANGAGKSTTIKSIIGTIEAFDGEIH
CEEEEEECCCCCHHHEEEEHEEEECCCCCEEEEEECCCCCCHHHHHHHHHHHHHCCCEEE
IKDGHRLAYIPEEPILYDHLTLWEHLRLAATSYDLPDEQWIPKAEELLKLFLLTGKEHHF
EECCCEEEECCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHCCCCCCC
PVHFSKGMKQKSLIVLSFMIKADIYIIDEPFIGLDPIATKNLITLLEQEKQRGAAILMTT
CEEHHCCCCHHHHHEEEEEHHCCEEEEECCCCCCCCCHHHHHHHHHHHHHHCCCEEEEEH
HVLDSAEKLCDTFVLLHEGRMLFKGNLIELQQRTNQTLDTSLLDCFYYLLEEEVANEPRL
HHHHHHHHHHHHHHHHHCCCEEEECCEEHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9387221; 9384377 [H]