Click here to switch to the map view.

The map label for this gene is 23100519

Identifier: 23100519

GI number: 23100519

Start: 3180615

End: 3182618

Strand: Reverse

Name: 23100519

Synonym: OB3064

Alternate gene names: NA

Gene position: 3182618-3180615 (Counterclockwise)

Preceding gene: 23100520

Following gene: 23100518

Centisome position: 87.66

GC content: 38.02

Gene sequence:

>2004_bases
ATGAGTGATCAACAACATGAAAATCTATCTGAAAGCAAACAACAAGAGCTGTTAGAAAAGTACGATGCAGAATCGAATAC
AAGAAAACTAACTGGAGTTTTAGCGATAATTATATTTGCTGCATTGGTTCTTTTCTCCATATTCCAGTTATATACGGGGA
TATTCGGACAATTGACAGCATACCTACAACGAACAATACATTTAGGTTTTGCGTTGTCACTTATCTTTTTACTATTCCCT
GCAGTTCGTAAGACAAAAAAAGATAGGATTCCGTGGTACGATTATGTTCTAATGGTTTTAGCCATTGTAGTTTGTGCTTA
TTGGCCGTTGAATTATGATTCACTTGTACAACAATTTGGTTCCATTCCACTAGATCAAATGCTTATTGGGGGATTAGCGA
TTCTGCTAGTATTAGAAGCAGCGCGTCGTGCAGTTGGATTACCCATTACGATCATAGCCTTGCTGTTTTTAGGCTATGCG
TTGTTAGGACCATATATCCCAGGAATGTTTGCACACTCCGGGTTATCATTAGAACAATTAATCCGTTCTATGTTCTTTAC
AACAGAAGGAATTTTAGGTACTCCATTACAAGTATCTTCTACCTATATTTTCTTATTTCTATTATTTGGTGCGTTTTTAG
TACAAACAGGTGTCGGAAATTACTTCAATGACTTGGCGATATCTATAGCAGGAAAAAGAGTTGGGGGACCAGCTAAAATA
GCTATATTCTCCAGTGCATTAAATGGTACAATCTCAGGAAGCTCTGTAGCTAACACAGTTACGACAGGGTCTTATACAAT
ACCATTGATGAAACGACTTGGTTATCGTAAGAACTTTGCTGGTGCTGTAGAAGCCGCAGCTTCTACTGGTGGTCAGATAA
TGCCTCCGATCATGGGTGCAGCAGCATTCTTGATGATTGAGTTTGCAGGAGAAAGTTACTGGAATATAGCGAAGGCAGCG
ATCATACCTGCTATTTTATATTTTGCAGGTATTTGGATCATGACTCACTTAGAGGCAAAACGAACAGGTTTAAAAGGATT
GTCTAGTGAGGAAATTCCTAGTAAAAAAACGGTGTTAAAGAAAATCCATCTTTTACTACCTATTGTGGCAATCGTATATT
TCTTATTTGTAGGAGTTAGTGTTGAACGTGCAGCAATATATGGTATCTTGGCTACCATCATTGTTAGTTTGTTCCTAAAG
GATACTCGTATAACAGTTCCGAAGTTTTTTGTAGCATTAGAACAAGGTGCGAGAACAGCACTTGGAGTAGCTGCAGCAAC
AGCCTGTGCCGGCATAATTGTAGGGGTTGTTACAAAAACTGGTCTAGGATTAAAACTTGGTAATAGCTTAGTATCTATTG
CAGGAACAATCGCAAGTACACCTGAGATACAATTAATGCTTACACTTGTATTTACAATGATAACTTCGATTATTATAGGT
ATGGGCTCGCCAACTACAGCGAATTATATTATTACATCGACCATTGCATTACCAGCAATTTTAGCGTTGAATGATAATTT
AGACGTAGCTATACCTGTATTAGCTGCTCATATGTTTGTATTTTATTTCGGTATTGTAGCGGATATTACACCTCCGGTAG
CTCTAGCTGCTTTTGCGGCAACAGGAATATCTGGAGGGGAACCTATTCGTACAGGTGGTAATGCTGCCCGATTGGCAATT
GCTGCTTTCATCATTCCGTACATGTTTGTATTAAACCCTACACTACTGATGATTGATTCTACCTGGTTAGAGATCTTATT
CTCCTTATTCACCGCAATACTTGGAATGATTGCGATTAGTGCAGGTATGATAGGATATTGGTACCGAAATATTAAGTGGT
ACGAAAGAGTCCTAGCAATTGCAACTGGGTTATTACTTATTTATCCAGAAGGCATGTCAGATACAATAGGATTTGTATTA
TTTGCACTTCAGTTAGTGCTACAATTTGTTACGAGAGATAAAGACGATGATAATCAAAGTGAAGTAAATGTAGCTAACAG
CTAA

Upstream 100 bases:

>100_bases
CACACTGTTCCTTTTAATGATTACTTTGTCCCGGGGGATTGGTATAAGTTAGAAGTGAAAGAAATTTCCCTATTCGAGCA
ATTGAAAGGAGTGAATATTC

Downstream 100 bases:

>100_bases
ATTAAATAAACCGCATGAAATTCATTTAATGAGTTCATGCGGTTTATTTATGTGGATAGAACAAAATAAATGTCGATTAT
TTCTAAATAATTCTTCATAC

Product: hypothetical protein

Products: NA

Alternate protein names: Trap Transporter 4tm/12tm Fusion Protein; TRAP Transporter; TRAP-Type Transport System Fused Permease Component; TRAP-Type Transport System Permease Component; TRAP-Type Transporter 4TM/12TM Fusion Protein; TRAP-T Family Transporter With Fused DctQ/DctM Subunits; Trap Family Transporter; TRAP-Type Transporter Permease Component; Inner Membrane Protein; TRAP-T Family Transporter Fused Inner Membrane Subunits; TRAP Transporter Transmembrane Protein; Permease; TRAP-Type Transport System Permease; TRAP Transporter Permease; TRAP-Type Transport System Permease Protein; Integral Membrane Protein; TRAP Transporter Large Permease; N-Carbamoyl-L-Amino Acid Hydrolase; TRAP Family Transporter; TRAP Transporter 4TM/12TM Fusion Family; 4TM/12TM TRAP Transporter; TRAP-Type Transporter Fused Permeases; Trap Transporter; C4-Dicarboxylate Transporter; TRAP-Type Transport System; TRAP Transporter Membrane-Spanning Component; TRAP Type Transporter Protein

Number of amino acids: Translated: 667; Mature: 666

Protein sequence:

>667_residues
MSDQQHENLSESKQQELLEKYDAESNTRKLTGVLAIIIFAALVLFSIFQLYTGIFGQLTAYLQRTIHLGFALSLIFLLFP
AVRKTKKDRIPWYDYVLMVLAIVVCAYWPLNYDSLVQQFGSIPLDQMLIGGLAILLVLEAARRAVGLPITIIALLFLGYA
LLGPYIPGMFAHSGLSLEQLIRSMFFTTEGILGTPLQVSSTYIFLFLLFGAFLVQTGVGNYFNDLAISIAGKRVGGPAKI
AIFSSALNGTISGSSVANTVTTGSYTIPLMKRLGYRKNFAGAVEAAASTGGQIMPPIMGAAAFLMIEFAGESYWNIAKAA
IIPAILYFAGIWIMTHLEAKRTGLKGLSSEEIPSKKTVLKKIHLLLPIVAIVYFLFVGVSVERAAIYGILATIIVSLFLK
DTRITVPKFFVALEQGARTALGVAAATACAGIIVGVVTKTGLGLKLGNSLVSIAGTIASTPEIQLMLTLVFTMITSIIIG
MGSPTTANYIITSTIALPAILALNDNLDVAIPVLAAHMFVFYFGIVADITPPVALAAFAATGISGGEPIRTGGNAARLAI
AAFIIPYMFVLNPTLLMIDSTWLEILFSLFTAILGMIAISAGMIGYWYRNIKWYERVLAIATGLLLIYPEGMSDTIGFVL
FALQLVLQFVTRDKDDDNQSEVNVANS

Sequences:

>Translated_667_residues
MSDQQHENLSESKQQELLEKYDAESNTRKLTGVLAIIIFAALVLFSIFQLYTGIFGQLTAYLQRTIHLGFALSLIFLLFP
AVRKTKKDRIPWYDYVLMVLAIVVCAYWPLNYDSLVQQFGSIPLDQMLIGGLAILLVLEAARRAVGLPITIIALLFLGYA
LLGPYIPGMFAHSGLSLEQLIRSMFFTTEGILGTPLQVSSTYIFLFLLFGAFLVQTGVGNYFNDLAISIAGKRVGGPAKI
AIFSSALNGTISGSSVANTVTTGSYTIPLMKRLGYRKNFAGAVEAAASTGGQIMPPIMGAAAFLMIEFAGESYWNIAKAA
IIPAILYFAGIWIMTHLEAKRTGLKGLSSEEIPSKKTVLKKIHLLLPIVAIVYFLFVGVSVERAAIYGILATIIVSLFLK
DTRITVPKFFVALEQGARTALGVAAATACAGIIVGVVTKTGLGLKLGNSLVSIAGTIASTPEIQLMLTLVFTMITSIIIG
MGSPTTANYIITSTIALPAILALNDNLDVAIPVLAAHMFVFYFGIVADITPPVALAAFAATGISGGEPIRTGGNAARLAI
AAFIIPYMFVLNPTLLMIDSTWLEILFSLFTAILGMIAISAGMIGYWYRNIKWYERVLAIATGLLLIYPEGMSDTIGFVL
FALQLVLQFVTRDKDDDNQSEVNVANS
>Mature_666_residues
SDQQHENLSESKQQELLEKYDAESNTRKLTGVLAIIIFAALVLFSIFQLYTGIFGQLTAYLQRTIHLGFALSLIFLLFPA
VRKTKKDRIPWYDYVLMVLAIVVCAYWPLNYDSLVQQFGSIPLDQMLIGGLAILLVLEAARRAVGLPITIIALLFLGYAL
LGPYIPGMFAHSGLSLEQLIRSMFFTTEGILGTPLQVSSTYIFLFLLFGAFLVQTGVGNYFNDLAISIAGKRVGGPAKIA
IFSSALNGTISGSSVANTVTTGSYTIPLMKRLGYRKNFAGAVEAAASTGGQIMPPIMGAAAFLMIEFAGESYWNIAKAAI
IPAILYFAGIWIMTHLEAKRTGLKGLSSEEIPSKKTVLKKIHLLLPIVAIVYFLFVGVSVERAAIYGILATIIVSLFLKD
TRITVPKFFVALEQGARTALGVAAATACAGIIVGVVTKTGLGLKLGNSLVSIAGTIASTPEIQLMLTLVFTMITSIIIGM
GSPTTANYIITSTIALPAILALNDNLDVAIPVLAAHMFVFYFGIVADITPPVALAAFAATGISGGEPIRTGGNAARLAIA
AFIIPYMFVLNPTLLMIDSTWLEILFSLFTAILGMIAISAGMIGYWYRNIKWYERVLAIATGLLLIYPEGMSDTIGFVLF
ALQLVLQFVTRDKDDDNQSEVNVANS

Specific function: Unknown

COG id: COG4666

COG function: function code R; TRAP-type uncharacterized transport system, fused permease components

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 71836; Mature: 71705

Theoretical pI: Translated: 8.74; Mature: 8.74

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSDQQHENLSESKQQELLEKYDAESNTRKLTGVLAIIIFAALVLFSIFQLYTGIFGQLTA
CCCCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
YLQRTIHLGFALSLIFLLFPAVRKTKKDRIPWYDYVLMVLAIVVCAYWPLNYDSLVQQFG
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHC
SIPLDQMLIGGLAILLVLEAARRAVGLPITIIALLFLGYALLGPYIPGMFAHSGLSLEQL
CCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCHHHCCCCCHHHH
IRSMFFTTEGILGTPLQVSSTYIFLFLLFGAFLVQTGVGNYFNDLAISIAGKRVGGPAKI
HHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHEECCCCCCCEEE
AIFSSALNGTISGSSVANTVTTGSYTIPLMKRLGYRKNFAGAVEAAASTGGQIMPPIMGA
EEEHHHHCCCCCCCHHHHHCCCCCCHHHHHHHCCCCCCHHHHHHHHHCCCCCCCCHHHHH
AAFLMIEFAGESYWNIAKAAIIPAILYFAGIWIMTHLEAKRTGLKGLSSEEIPSKKTVLK
HHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHH
KIHLLLPIVAIVYFLFVGVSVERAAIYGILATIIVSLFLKDTRITVPKFFVALEQGARTA
HHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCHHH
LGVAAATACAGIIVGVVTKTGLGLKLGNSLVSIAGTIASTPEIQLMLTLVFTMITSIIIG
HHHHHHHHHHHHHHHHHHHCCCCHHHCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHC
MGSPTTANYIITSTIALPAILALNDNLDVAIPVLAAHMFVFYFGIVADITPPVALAAFAA
CCCCCCCCHHHHHHHHHHHHHEECCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHH
TGISGGEPIRTGGNAARLAIAAFIIPYMFVLNPTLLMIDSTWLEILFSLFTAILGMIAIS
HCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCHHEEEHHHHHHHHHHHHHHHHHHHHHH
AGMIGYWYRNIKWYERVLAIATGLLLIYPEGMSDTIGFVLFALQLVLQFVTRDKDDDNQS
HHHHHHHHHHHHHHHHHHHHHHCHHEEECCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCC
EVNVANS
CCCCCCC
>Mature Secondary Structure 
SDQQHENLSESKQQELLEKYDAESNTRKLTGVLAIIIFAALVLFSIFQLYTGIFGQLTA
CCCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
YLQRTIHLGFALSLIFLLFPAVRKTKKDRIPWYDYVLMVLAIVVCAYWPLNYDSLVQQFG
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHC
SIPLDQMLIGGLAILLVLEAARRAVGLPITIIALLFLGYALLGPYIPGMFAHSGLSLEQL
CCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCHHHCCCCCHHHH
IRSMFFTTEGILGTPLQVSSTYIFLFLLFGAFLVQTGVGNYFNDLAISIAGKRVGGPAKI
HHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHEECCCCCCCEEE
AIFSSALNGTISGSSVANTVTTGSYTIPLMKRLGYRKNFAGAVEAAASTGGQIMPPIMGA
EEEHHHHCCCCCCCHHHHHCCCCCCHHHHHHHCCCCCCHHHHHHHHHCCCCCCCCHHHHH
AAFLMIEFAGESYWNIAKAAIIPAILYFAGIWIMTHLEAKRTGLKGLSSEEIPSKKTVLK
HHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHH
KIHLLLPIVAIVYFLFVGVSVERAAIYGILATIIVSLFLKDTRITVPKFFVALEQGARTA
HHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCHHH
LGVAAATACAGIIVGVVTKTGLGLKLGNSLVSIAGTIASTPEIQLMLTLVFTMITSIIIG
HHHHHHHHHHHHHHHHHHHCCCCHHHCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHC
MGSPTTANYIITSTIALPAILALNDNLDVAIPVLAAHMFVFYFGIVADITPPVALAAFAA
CCCCCCCCHHHHHHHHHHHHHEECCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHH
TGISGGEPIRTGGNAARLAIAAFIIPYMFVLNPTLLMIDSTWLEILFSLFTAILGMIAIS
HCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCHHEEEHHHHHHHHHHHHHHHHHHHHHH
AGMIGYWYRNIKWYERVLAIATGLLLIYPEGMSDTIGFVLFALQLVLQFVTRDKDDDNQS
HHHHHHHHHHHHHHHHHHHHHHCHHEEECCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCC
EVNVANS
CCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA