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The map label for this gene is ypnP [H]

Identifier: 23100518

GI number: 23100518

Start: 3179112

End: 3180452

Strand: Reverse

Name: ypnP [H]

Synonym: OB3063

Alternate gene names: 23100518

Gene position: 3180452-3179112 (Counterclockwise)

Preceding gene: 23100519

Following gene: 23100517

Centisome position: 87.6

GC content: 35.94

Gene sequence:

>1341_bases
ATGAGTAACAAGCAGTATGATTTTACACAAGGTAGTATCGCTAAGCAGTTATTTTATTTTTCAGGACCGATATTACTTGC
TAATTTATTACAAACTTCTTATCAATTTATAGACAGTTTATGGGTAGGAAATTTATTAGGTGCATCTGCTCTAGGGGCAG
TAGCGATTTCAGGTACTATTCTTTTTGTGGTACTTTCCTTTATTATAGGTATGAACAATGCGGCACTTACTATCCTTTCT
CAACAAAAAGGAAAACAAAATGAAAATGGCTTAAGAAAATATTTAAATGCTTTCGTTGTTTTATTAACCTTAATTTCCAT
TTTTCTTGGAGTAATAGGATACATATTCGCTGGACAGTTTCTAGGTTTACTAGGAACTCCAGAATCGATGATGGATGATG
CTACTACCTATTTACGAATCAATTTTATCGGAATTTGGTTTTTGTTTGGCTATAACTTCATCAGTACAGTTCTTCGATCG
TTAGGAGATAGTAAAACACCATTATATTTTATTACCATTGCAGTAGGTTTAAATATTGTTTTGGATCCGTTGTTCATTTC
TGTGTTCGATTGGGGAATAGAAGGAGCGGCATACGCAACGCTGCTTTCCCAAGGATTCTCCTTTTTGTGTGGAATTTCTT
ATGTACTATGGAAGAAATTAGCTCCGTTTTCTCTTCCTACGTTACCAACAAAAAAAGAAATAAAATTAATTCTACATTTA
GGAATACCATCTGGATTACAAATGGCTGTTATCTCAGCAGGTTCTGCAGCAATTATGAGTGTAGTGACAACACATGGAGA
GTCTGTGGTAGCTGGATTTGGGGCTGCTCAGCGTTTAGATAGTTTACTCATGCTACCAGCTCATGCGTTAAGTACATCCG
TAGCAAGTATGGCGGGACAGAATATCGGCATCAAAAACTGGAAGCGAATACGCCAAATTGCAATCTATGGAGTAATATAT
AACTTTGCTATTATGCTTGTAATTGGTATTGCTGTAGCAGTATTTGCGAAATATGGAATTCGGTTATTTATCAGAGAATC
AGATGCAGTAGATTTTGGAACGGTATATTTACAAATTGTTGCACTCTGTTATCCGTTTTTAGGTATTAACTTTATATTAA
ATGGAATAGTACGAGCGGCTGGTGCGATGTATCAAGTGCTCATCTTAAATGTCATTTCCTTTTGGGTATTAAGGTATCCA
TTAACCGCGATGTTTTCTTCGTGGTTTGGGGAAGTTGGAATTGGGATTGGTATGGGTGGAAGTTTCGTGATAAGTAGCTT
ATTCGCCATTCTTTATTATAGATATGGTAAATGGCGACAGAAGGAATTGTTCGTAGATTAA

Upstream 100 bases:

>100_bases
AAAATAAATGTCGATTATTTCTAAATAATTCTTCATACAATACAATATCTTTCTGTTATGATAATAGCAATGGATTTTGT
TGAGGAAGAGGCGAATACAT

Downstream 100 bases:

>100_bases
ATAACAAATGGGAGAGTAGGAAAAAATGCTTTTATTCATTGGGATTATTTCTGGAAGTATTATCGGTTTGTTTTTCTATT
TATGCCAATTAATTACAAAT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 446; Mature: 445

Protein sequence:

>446_residues
MSNKQYDFTQGSIAKQLFYFSGPILLANLLQTSYQFIDSLWVGNLLGASALGAVAISGTILFVVLSFIIGMNNAALTILS
QQKGKQNENGLRKYLNAFVVLLTLISIFLGVIGYIFAGQFLGLLGTPESMMDDATTYLRINFIGIWFLFGYNFISTVLRS
LGDSKTPLYFITIAVGLNIVLDPLFISVFDWGIEGAAYATLLSQGFSFLCGISYVLWKKLAPFSLPTLPTKKEIKLILHL
GIPSGLQMAVISAGSAAIMSVVTTHGESVVAGFGAAQRLDSLLMLPAHALSTSVASMAGQNIGIKNWKRIRQIAIYGVIY
NFAIMLVIGIAVAVFAKYGIRLFIRESDAVDFGTVYLQIVALCYPFLGINFILNGIVRAAGAMYQVLILNVISFWVLRYP
LTAMFSSWFGEVGIGIGMGGSFVISSLFAILYYRYGKWRQKELFVD

Sequences:

>Translated_446_residues
MSNKQYDFTQGSIAKQLFYFSGPILLANLLQTSYQFIDSLWVGNLLGASALGAVAISGTILFVVLSFIIGMNNAALTILS
QQKGKQNENGLRKYLNAFVVLLTLISIFLGVIGYIFAGQFLGLLGTPESMMDDATTYLRINFIGIWFLFGYNFISTVLRS
LGDSKTPLYFITIAVGLNIVLDPLFISVFDWGIEGAAYATLLSQGFSFLCGISYVLWKKLAPFSLPTLPTKKEIKLILHL
GIPSGLQMAVISAGSAAIMSVVTTHGESVVAGFGAAQRLDSLLMLPAHALSTSVASMAGQNIGIKNWKRIRQIAIYGVIY
NFAIMLVIGIAVAVFAKYGIRLFIRESDAVDFGTVYLQIVALCYPFLGINFILNGIVRAAGAMYQVLILNVISFWVLRYP
LTAMFSSWFGEVGIGIGMGGSFVISSLFAILYYRYGKWRQKELFVD
>Mature_445_residues
SNKQYDFTQGSIAKQLFYFSGPILLANLLQTSYQFIDSLWVGNLLGASALGAVAISGTILFVVLSFIIGMNNAALTILSQ
QKGKQNENGLRKYLNAFVVLLTLISIFLGVIGYIFAGQFLGLLGTPESMMDDATTYLRINFIGIWFLFGYNFISTVLRSL
GDSKTPLYFITIAVGLNIVLDPLFISVFDWGIEGAAYATLLSQGFSFLCGISYVLWKKLAPFSLPTLPTKKEIKLILHLG
IPSGLQMAVISAGSAAIMSVVTTHGESVVAGFGAAQRLDSLLMLPAHALSTSVASMAGQNIGIKNWKRIRQIAIYGVIYN
FAIMLVIGIAVAVFAKYGIRLFIRESDAVDFGTVYLQIVALCYPFLGINFILNGIVRAAGAMYQVLILNVISFWVLRYPL
TAMFSSWFGEVGIGIGMGGSFVISSLFAILYYRYGKWRQKELFVD

Specific function: Unknown

COG id: COG0534

COG function: function code V; Na+-driven multidrug efflux pump

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the multi antimicrobial extrusion (MATE) (TC 2.A.66.1) family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002528
- InterPro:   IPR015522 [H]

Pfam domain/function: PF01554 MatE [H]

EC number: NA

Molecular weight: Translated: 48762; Mature: 48631

Theoretical pI: Translated: 9.64; Mature: 9.64

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSNKQYDFTQGSIAKQLFYFSGPILLANLLQTSYQFIDSLWVGNLLGASALGAVAISGTI
CCCCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LFVVLSFIIGMNNAALTILSQQKGKQNENGLRKYLNAFVVLLTLISIFLGVIGYIFAGQF
HHHHHHHHHCCCCHHEEEEEHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LGLLGTPESMMDDATTYLRINFIGIWFLFGYNFISTVLRSLGDSKTPLYFITIAVGLNIV
HHHCCCCHHHHHCHHHEEEHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEHHHHHHHH
LDPLFISVFDWGIEGAAYATLLSQGFSFLCGISYVLWKKLAPFSLPTLPTKKEIKLILHL
HHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHEEEEEEE
GIPSGLQMAVISAGSAAIMSVVTTHGESVVAGFGAAQRLDSLLMLPAHALSTSVASMAGQ
CCCCCCHHHHCCCCHHHHHHHHHHCCCHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCC
NIGIKNWKRIRQIAIYGVIYNFAIMLVIGIAVAVFAKYGIRLFIRESDAVDFGTVYLQIV
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEECCCCCHHHHHHHHHH
ALCYPFLGINFILNGIVRAAGAMYQVLILNVISFWVLRYPLTAMFSSWFGEVGIGIGMGG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCH
SFVISSLFAILYYRYGKWRQKELFVD
HHHHHHHHHHHHHHHCCCCCCCCCCC
>Mature Secondary Structure 
SNKQYDFTQGSIAKQLFYFSGPILLANLLQTSYQFIDSLWVGNLLGASALGAVAISGTI
CCCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LFVVLSFIIGMNNAALTILSQQKGKQNENGLRKYLNAFVVLLTLISIFLGVIGYIFAGQF
HHHHHHHHHCCCCHHEEEEEHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LGLLGTPESMMDDATTYLRINFIGIWFLFGYNFISTVLRSLGDSKTPLYFITIAVGLNIV
HHHCCCCHHHHHCHHHEEEHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEHHHHHHHH
LDPLFISVFDWGIEGAAYATLLSQGFSFLCGISYVLWKKLAPFSLPTLPTKKEIKLILHL
HHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHEEEEEEE
GIPSGLQMAVISAGSAAIMSVVTTHGESVVAGFGAAQRLDSLLMLPAHALSTSVASMAGQ
CCCCCCHHHHCCCCHHHHHHHHHHCCCHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCC
NIGIKNWKRIRQIAIYGVIYNFAIMLVIGIAVAVFAKYGIRLFIRESDAVDFGTVYLQIV
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEECCCCCHHHHHHHHHH
ALCYPFLGINFILNGIVRAAGAMYQVLILNVISFWVLRYPLTAMFSSWFGEVGIGIGMGG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCH
SFVISSLFAILYYRYGKWRQKELFVD
HHHHHHHHHHHHHHHCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]