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The map label for this gene is yfmJ [H]

Identifier: 23100402

GI number: 23100402

Start: 3053151

End: 3054170

Strand: Direct

Name: yfmJ [H]

Synonym: OB2947

Alternate gene names: 23100402

Gene position: 3053151-3054170 (Clockwise)

Preceding gene: 23100399

Following gene: 23100444

Centisome position: 84.1

GC content: 37.25

Gene sequence:

>1020_bases
ATGTCAGAACAAAATCAACAAATAAAATTAACTAAGCGTCCGGAAGGTACTCCTACAAATGAACATTTTGAAATTGTAGA
TATACCGATTAATAACCCAAATGATGGTGAAGTCCTTATAAAAACTATTTATCTTTCTGTTGACCCTTATATGCGAGGCC
GAATGAGTGCTGGAAAATCATACGTGAAGCCATTTGAGGTTGATAAGCCAATGAATGGCACGATTGTTGGGGAAGTAGTA
ACTTCTGAATCAGAGTCATTTTCTAAAGGTGACCTCGTTCGCGGGATGTTACCATGGCAACGATATAATGTAGTTTCTGC
ATCATATGTTGAAAAAATCGATCCTTCAGTAGCACCATTAACAGCATATTTAAGTGTGCTAGGTCTAACCGGCCTCACTG
CTTATTTTGGTTTGTTAGACATTGGTCAGCCTAAAGAGGGCGAGACGGTAGTAGTATCCGCAGCTGCTGGAGCAGTAGGT
TCTTCAGTAGGACAAATCGCGAAAATTAAAGGTGCTCATGTAGTCGGAATTGCAGGTACAGATGAAAAAATAGATTATCT
AGAAAATCAATTAGGATTCGATAAAGCAGTAAATTATAAAGATGCAGACTTTAAGCAACAACTAAAAGAAGCTTGTCCAA
ATGGCGTAGACGTCTATTTCGATAATGTAGGCGGAGAAGTAACAGACAATGTAATAAGCCTATTAAATGATTTTGCTCGT
ATACCATTATGTGGTGCGATATCCACGTACAACCTGAAACCAGGTGAGGATCATGGTCCAAGTATATTGCCAAAAATCCT
TAAAACACGTACTACCATGAAAGGATTTATCGTAAGCGATTATCAAGAACAATTCCCAGAAGCAATCAAAGATCTAGCAA
AATGGGTTGCTGAAGATAAATTATCATATGAAGTAACAACTGTTGATGGTTTTGAAAATACACCAACTGCATTTTTAGAC
TTATTCGAAGGAAAAAACAAAGGAAAACAGCTTGTAAAAGTAAGCGAAATTTCCTCTTAA

Upstream 100 bases:

>100_bases
GAATATAGATAGGGAAAGAAATACTTGTATATGTTTTGGAATAATGTAAAGATGGGTAAATACGTTATACAATCATTAAA
TTAGAAAGGTTGGATAGATC

Downstream 100 bases:

>100_bases
GAACAAAAACGTAAGCGTTCGTTTAGCCTCATAAGGAACAGCTGCATCATTTTCTAGACCATAAAAAATGTCCGAGCTAA
CTGCTAGTTCGGACATTTTG

Product: quinone oxidoreductase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 339; Mature: 338

Protein sequence:

>339_residues
MSEQNQQIKLTKRPEGTPTNEHFEIVDIPINNPNDGEVLIKTIYLSVDPYMRGRMSAGKSYVKPFEVDKPMNGTIVGEVV
TSESESFSKGDLVRGMLPWQRYNVVSASYVEKIDPSVAPLTAYLSVLGLTGLTAYFGLLDIGQPKEGETVVVSAAAGAVG
SSVGQIAKIKGAHVVGIAGTDEKIDYLENQLGFDKAVNYKDADFKQQLKEACPNGVDVYFDNVGGEVTDNVISLLNDFAR
IPLCGAISTYNLKPGEDHGPSILPKILKTRTTMKGFIVSDYQEQFPEAIKDLAKWVAEDKLSYEVTTVDGFENTPTAFLD
LFEGKNKGKQLVKVSEISS

Sequences:

>Translated_339_residues
MSEQNQQIKLTKRPEGTPTNEHFEIVDIPINNPNDGEVLIKTIYLSVDPYMRGRMSAGKSYVKPFEVDKPMNGTIVGEVV
TSESESFSKGDLVRGMLPWQRYNVVSASYVEKIDPSVAPLTAYLSVLGLTGLTAYFGLLDIGQPKEGETVVVSAAAGAVG
SSVGQIAKIKGAHVVGIAGTDEKIDYLENQLGFDKAVNYKDADFKQQLKEACPNGVDVYFDNVGGEVTDNVISLLNDFAR
IPLCGAISTYNLKPGEDHGPSILPKILKTRTTMKGFIVSDYQEQFPEAIKDLAKWVAEDKLSYEVTTVDGFENTPTAFLD
LFEGKNKGKQLVKVSEISS
>Mature_338_residues
SEQNQQIKLTKRPEGTPTNEHFEIVDIPINNPNDGEVLIKTIYLSVDPYMRGRMSAGKSYVKPFEVDKPMNGTIVGEVVT
SESESFSKGDLVRGMLPWQRYNVVSASYVEKIDPSVAPLTAYLSVLGLTGLTAYFGLLDIGQPKEGETVVVSAAAGAVGS
SVGQIAKIKGAHVVGIAGTDEKIDYLENQLGFDKAVNYKDADFKQQLKEACPNGVDVYFDNVGGEVTDNVISLLNDFARI
PLCGAISTYNLKPGEDHGPSILPKILKTRTTMKGFIVSDYQEQFPEAIKDLAKWVAEDKLSYEVTTVDGFENTPTAFLDL
FEGKNKGKQLVKVSEISS

Specific function: Putative quinone oxidoreductase that may contribute to the degradation of aromatic compounds (Potential) [H]

COG id: COG2130

COG function: function code R; Putative NADP-dependent oxidoreductases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the NADP-dependent oxidoreductase L4BD family [H]

Homologues:

Organism=Homo sapiens, GI226246682, Length=346, Percent_Identity=40.4624277456647, Blast_Score=245, Evalue=4e-65,
Organism=Homo sapiens, GI226246680, Length=346, Percent_Identity=40.4624277456647, Blast_Score=245, Evalue=4e-65,
Organism=Homo sapiens, GI22748929, Length=346, Percent_Identity=40.4624277456647, Blast_Score=245, Evalue=4e-65,
Organism=Homo sapiens, GI226059159, Length=329, Percent_Identity=42.5531914893617, Blast_Score=240, Evalue=2e-63,
Organism=Homo sapiens, GI226059133, Length=329, Percent_Identity=42.5531914893617, Blast_Score=240, Evalue=2e-63,
Organism=Homo sapiens, GI226056130, Length=300, Percent_Identity=42.3333333333333, Blast_Score=207, Evalue=7e-54,
Organism=Homo sapiens, GI28557745, Length=327, Percent_Identity=32.1100917431193, Blast_Score=130, Evalue=2e-30,
Organism=Homo sapiens, GI194239674, Length=242, Percent_Identity=28.5123966942149, Blast_Score=70, Evalue=4e-12,
Organism=Homo sapiens, GI13236495, Length=242, Percent_Identity=28.5123966942149, Blast_Score=70, Evalue=4e-12,
Organism=Escherichia coli, GI226510941, Length=337, Percent_Identity=44.8071216617211, Blast_Score=306, Evalue=2e-84,
Organism=Caenorhabditis elegans, GI133901710, Length=355, Percent_Identity=36.6197183098592, Blast_Score=213, Evalue=2e-55,
Organism=Caenorhabditis elegans, GI133901712, Length=355, Percent_Identity=36.6197183098592, Blast_Score=212, Evalue=2e-55,
Organism=Saccharomyces cerevisiae, GI6323504, Length=351, Percent_Identity=35.8974358974359, Blast_Score=160, Evalue=3e-40,
Organism=Saccharomyces cerevisiae, GI6319520, Length=206, Percent_Identity=31.5533980582524, Blast_Score=63, Evalue=8e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013149
- InterPro:   IPR002085
- InterPro:   IPR011032
- InterPro:   IPR016040 [H]

Pfam domain/function: PF00107 ADH_zinc_N [H]

EC number: 1.-.-.- [C]

Molecular weight: Translated: 36945; Mature: 36814

Theoretical pI: Translated: 4.63; Mature: 4.63

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSEQNQQIKLTKRPEGTPTNEHFEIVDIPINNPNDGEVLIKTIYLSVDPYMRGRMSAGKS
CCCCCCEEEEEECCCCCCCCCCEEEEEEECCCCCCCCEEEEEEEEECCHHHHHHHHCCHH
YVKPFEVDKPMNGTIVGEVVTSESESFSKGDLVRGMLPWQRYNVVSASYVEKIDPSVAPL
HCCCCCCCCCCCCEEEEEEEECCCCCCCCCCHHHCCCCHHHHCCHHHHHHHHCCCCHHHH
TAYLSVLGLTGLTAYFGLLDIGQPKEGETVVVSAAAGAVGSSVGQIAKIKGAHVVGIAGT
HHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEECCCHHHHHHHHHHEECCCEEEEECCC
DEKIDYLENQLGFDKAVNYKDADFKQQLKEACPNGVDVYFDNVGGEVTDNVISLLNDFAR
CHHHHHHHHHCCHHHCCCCCCCHHHHHHHHHCCCCCEEEEECCCCHHHHHHHHHHHHHHH
IPLCGAISTYNLKPGEDHGPSILPKILKTRTTMKGFIVSDYQEQFPEAIKDLAKWVAEDK
CCEECCEEECCCCCCCCCCCHHHHHHHHHHHHHHHHEECHHHHHHHHHHHHHHHHHHHCC
LSYEVTTVDGFENTPTAFLDLFEGKNKGKQLVKVSEISS
CCEEEEEECCCCCCCHHHHHHHCCCCCCHHEEEECCCCC
>Mature Secondary Structure 
SEQNQQIKLTKRPEGTPTNEHFEIVDIPINNPNDGEVLIKTIYLSVDPYMRGRMSAGKS
CCCCCEEEEEECCCCCCCCCCEEEEEEECCCCCCCCEEEEEEEEECCHHHHHHHHCCHH
YVKPFEVDKPMNGTIVGEVVTSESESFSKGDLVRGMLPWQRYNVVSASYVEKIDPSVAPL
HCCCCCCCCCCCCEEEEEEEECCCCCCCCCCHHHCCCCHHHHCCHHHHHHHHCCCCHHHH
TAYLSVLGLTGLTAYFGLLDIGQPKEGETVVVSAAAGAVGSSVGQIAKIKGAHVVGIAGT
HHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEECCCHHHHHHHHHHEECCCEEEEECCC
DEKIDYLENQLGFDKAVNYKDADFKQQLKEACPNGVDVYFDNVGGEVTDNVISLLNDFAR
CHHHHHHHHHCCHHHCCCCCCCHHHHHHHHHCCCCCEEEEECCCCHHHHHHHHHHHHHHH
IPLCGAISTYNLKPGEDHGPSILPKILKTRTTMKGFIVSDYQEQFPEAIKDLAKWVAEDK
CCEECCEEECCCCCCCCCCCHHHHHHHHHHHHHHHHEECHHHHHHHHHHHHHHHHHHHCC
LSYEVTTVDGFENTPTAFLDLFEGKNKGKQLVKVSEISS
CCEEEEEECCCCCCCHHHHHHHCCCCCCHHEEEECCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9272861; 9384377 [H]