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The map label for this gene is rfaB [C]

Identifier: 23100382

GI number: 23100382

Start: 3026408

End: 3027526

Strand: Reverse

Name: rfaB [C]

Synonym: OB2927

Alternate gene names: 23100382

Gene position: 3027526-3026408 (Counterclockwise)

Preceding gene: 23100383

Following gene: 23100381

Centisome position: 83.39

GC content: 33.78

Gene sequence:

>1119_bases
GTGCAAAGAAAAAAAGTTGTTTTTTTTATTTATCAAATGGGCTCTGGCGGGGCTGCAAGAACCATGCTTAATATATTAAA
TAACATAGATTTAGAAGCGTTCGAACCGGTTCTAGTGACTTGCAATTACAATGGTGATTATGAAAAGTATTTGAAGGAAG
AAATTAAGTTTATCAAACTATCAACAAAACGTTTGAGATCGGCGATTTTACCTTTATCAAAAATTATAAGAGAAGAACAA
GCAGATATCGTCTTTAGTACAATCCCTAATTATAATATTGTTGCTATTCTTGCAAGACTGCTATCTTTCACTAAAGCAAA
GAATATTGTCCGGGAAGCAGCATTTTTAGGTGGAAGTAAGAAAATGGAAGCTAAATTGAGAATATATGGATTGTTTTATC
TGTTTGCCAAAAAAGTAGTTGCTCTATCGAATGGAGTTAAGGAGAACATTATTGAACAATATAAGGTACGTTCAAATAAA
GTATGTGTAATTTATAACCCGGTTGATATCAAAGGCATCGAGCAACAGACTCACATTAATCTTCTGCCAAAAGAACATCA
AAGCATTTTTTTGGGGGAGAATAAAGTTGTTATTACAGCTGGACGGTTTGTAGATGATAAAGATCATATCACTTTAATTA
ATGCTTTTCAAAAACTCCAAGAAAAAGTTAAAGCTAACTTGGTGATTCTTGGTGAAGGCGAATTGGAAGAAAAGCTGACT
TCATTAGTAAAGCAATTAAAAATAGAGGATAAAGTATATTTCATCGGATTTCAAGAAAACCCATACGTTTATTTCCATCA
TTCAGATGTATTTGCACTAACTTCTAAGAGAGAAGGCTTTGGACATGTATTAACGGAAGCACTAGCTACCGGAGTTCCCG
TAGTATCTACGAGAGCGAAGCCAGGTGCAGAAGAAGTATTAGATAACGGAAAATATGGACTCCTAATCGATGTAGGAGAT
ATTGATGCGCTAACGTTTAATTTAGAGAAGGTCCTTCAGTGGGACGAGCATCAGAAGAAAATAGTTACAGAATTAGGTTT
AATGAGAGTAAAAGAATTTCAGGCTAGTAAAATTGTAAAGCAATATGAACAATTGTTTAATGAAACTATAGATGATTAG

Upstream 100 bases:

>100_bases
TGTGACATATTTGTAATGTTATCGACAATTTATTTATTAAAGCCCCTATGGTATAATTCGTTCAGTGTAAACGCAATTTT
TTTAAAAGGAATGAAGTATG

Downstream 100 bases:

>100_bases
TATTAGGAGTTGAAAAGAAGTAATGACTGCTTCAAATCGTGTCGTTCAGCTAACAACCGTACATCATCCTTATGATCCGA
GGATTTATCATAAAGAATGT

Product: glycosyltransferase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 372; Mature: 372

Protein sequence:

>372_residues
MQRKKVVFFIYQMGSGGAARTMLNILNNIDLEAFEPVLVTCNYNGDYEKYLKEEIKFIKLSTKRLRSAILPLSKIIREEQ
ADIVFSTIPNYNIVAILARLLSFTKAKNIVREAAFLGGSKKMEAKLRIYGLFYLFAKKVVALSNGVKENIIEQYKVRSNK
VCVIYNPVDIKGIEQQTHINLLPKEHQSIFLGENKVVITAGRFVDDKDHITLINAFQKLQEKVKANLVILGEGELEEKLT
SLVKQLKIEDKVYFIGFQENPYVYFHHSDVFALTSKREGFGHVLTEALATGVPVVSTRAKPGAEEVLDNGKYGLLIDVGD
IDALTFNLEKVLQWDEHQKKIVTELGLMRVKEFQASKIVKQYEQLFNETIDD

Sequences:

>Translated_372_residues
MQRKKVVFFIYQMGSGGAARTMLNILNNIDLEAFEPVLVTCNYNGDYEKYLKEEIKFIKLSTKRLRSAILPLSKIIREEQ
ADIVFSTIPNYNIVAILARLLSFTKAKNIVREAAFLGGSKKMEAKLRIYGLFYLFAKKVVALSNGVKENIIEQYKVRSNK
VCVIYNPVDIKGIEQQTHINLLPKEHQSIFLGENKVVITAGRFVDDKDHITLINAFQKLQEKVKANLVILGEGELEEKLT
SLVKQLKIEDKVYFIGFQENPYVYFHHSDVFALTSKREGFGHVLTEALATGVPVVSTRAKPGAEEVLDNGKYGLLIDVGD
IDALTFNLEKVLQWDEHQKKIVTELGLMRVKEFQASKIVKQYEQLFNETIDD
>Mature_372_residues
MQRKKVVFFIYQMGSGGAARTMLNILNNIDLEAFEPVLVTCNYNGDYEKYLKEEIKFIKLSTKRLRSAILPLSKIIREEQ
ADIVFSTIPNYNIVAILARLLSFTKAKNIVREAAFLGGSKKMEAKLRIYGLFYLFAKKVVALSNGVKENIIEQYKVRSNK
VCVIYNPVDIKGIEQQTHINLLPKEHQSIFLGENKVVITAGRFVDDKDHITLINAFQKLQEKVKANLVILGEGELEEKLT
SLVKQLKIEDKVYFIGFQENPYVYFHHSDVFALTSKREGFGHVLTEALATGVPVVSTRAKPGAEEVLDNGKYGLLIDVGD
IDALTFNLEKVLQWDEHQKKIVTELGLMRVKEFQASKIVKQYEQLFNETIDD

Specific function: Adds A Galactose Goup To A Glucose Group Of Lps. [C]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the glycosyltransferase 1 family [H]

Homologues:

Organism=Escherichia coli, GI226510984, Length=341, Percent_Identity=24.633431085044, Blast_Score=77, Evalue=1e-15,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001296 [H]

Pfam domain/function: PF00534 Glycos_transf_1 [H]

EC number: 2.4.1.- [C]

Molecular weight: Translated: 42342; Mature: 42342

Theoretical pI: Translated: 9.03; Mature: 9.03

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQRKKVVFFIYQMGSGGAARTMLNILNNIDLEAFEPVLVTCNYNGDYEKYLKEEIKFIKL
CCCCEEEEEEEEECCCHHHHHHHHHHHCCCCCCCCCEEEEEECCCCHHHHHHHHHHHHHH
STKRLRSAILPLSKIIREEQADIVFSTIPNYNIVAILARLLSFTKAKNIVREAAFLGGSK
HHHHHHHHHHHHHHHHHHHHCCEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
KMEAKLRIYGLFYLFAKKVVALSNGVKENIIEQYKVRSNKVCVIYNPVDIKGIEQQTHIN
CCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCEEE
LLPKEHQSIFLGENKVVITAGRFVDDKDHITLINAFQKLQEKVKANLVILGEGELEEKLT
CCCCCCCEEEECCCEEEEEECCEECCCCCCHHHHHHHHHHHHHHCCEEEEECCHHHHHHH
SLVKQLKIEDKVYFIGFQENPYVYFHHSDVFALTSKREGFGHVLTEALATGVPVVSTRAK
HHHHHHCCCCEEEEEEECCCCEEEEECCCEEEEECCCCCHHHHHHHHHHCCCCEEECCCC
PGAEEVLDNGKYGLLIDVGDIDALTFNLEKVLQWDEHQKKIVTELGLMRVKEFQASKIVK
CCHHHHHCCCCEEEEEEECCCCEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
QYEQLFNETIDD
HHHHHHHHHCCC
>Mature Secondary Structure
MQRKKVVFFIYQMGSGGAARTMLNILNNIDLEAFEPVLVTCNYNGDYEKYLKEEIKFIKL
CCCCEEEEEEEEECCCHHHHHHHHHHHCCCCCCCCCEEEEEECCCCHHHHHHHHHHHHHH
STKRLRSAILPLSKIIREEQADIVFSTIPNYNIVAILARLLSFTKAKNIVREAAFLGGSK
HHHHHHHHHHHHHHHHHHHHCCEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
KMEAKLRIYGLFYLFAKKVVALSNGVKENIIEQYKVRSNKVCVIYNPVDIKGIEQQTHIN
CCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCEEE
LLPKEHQSIFLGENKVVITAGRFVDDKDHITLINAFQKLQEKVKANLVILGEGELEEKLT
CCCCCCCEEEECCCEEEEEECCEECCCCCCHHHHHHHHHHHHHHCCEEEEECCHHHHHHH
SLVKQLKIEDKVYFIGFQENPYVYFHHSDVFALTSKREGFGHVLTEALATGVPVVSTRAK
HHHHHHCCCCEEEEEEECCCCEEEEECCCEEEEECCCCCHHHHHHHHHHCCCCEEECCCC
PGAEEVLDNGKYGLLIDVGDIDALTFNLEKVLQWDEHQKKIVTELGLMRVKEFQASKIVK
CCHHHHHCCCCEEEEEEECCCCEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
QYEQLFNETIDD
HHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: Glycosyltransferases; Hexosyltransferases [C]

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]