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The map label for this gene is yibD [C]

Identifier: 23100376

GI number: 23100376

Start: 3017833

End: 3019977

Strand: Reverse

Name: yibD [C]

Synonym: OB2921

Alternate gene names: 23100376

Gene position: 3019977-3017833 (Counterclockwise)

Preceding gene: 23100377

Following gene: 23100375

Centisome position: 83.18

GC content: 35.34

Gene sequence:

>2145_bases
ATGACTAAAGATACGGATAATTATAATCAAGATCTTCTTCATTCACGTGTAAAACAAATGGAACAGGAATTGCATGTTCT
TAAAAACAAAAATTCATTAGTAGAAGATCAGCTAGCTGCTTACAGAAGAGAATTCTATCTAGCTAGAAACATAATTGATC
AATTATCAAATATGAAAAATGAAGGTATAGCCGCTGCAAAGGCTATACCTGCTTATGCATTACGTAGAAGAAATATCAAA
AAAATATATAGCAAGAGCTACAAATTAAAAGATGCTCGAAATCAATTAAAAAAATATAAACAGTATTTATATGATTTAGG
CTTTGAATCGAGAGCGTTAAGGGATCTTCACTGGCTATACATGAATGACAAGAATGTATATGTAAAAAAGGCAGCTGCTT
GGGAATTAGCTATGTGGTATTCCAATAAACAGACAGTGGATGGAGCTAAGGAAGCGTTATCTTACTTAGAGGTAGCAGCT
CAGGATGAAACGAATGAGGACCTATTGCGACAGATAGCTATACAAAAAGCGGAAGCTCATCGAATGTTAGGTGATCAAGA
TAAAGGACTACGATTATTGAAAGAGGTAGTAATCAACTCCAGTCATATCCATTCCGATGTATTGTTGGCTATTGCAAACC
TCTGCAGTAATGAGAATGATCGCTTATTTTGGATAAATGAAGTAATGAAGGCGTATAATCTAGAACCAATTTCCTTTCAA
GATATAGGAACGAAATCGCTGTATCACCGTTTACATAGTGATTATACCCATAATGATGAAGAAGAATTACTTCCTAAAGT
AACCATTATCATTCCAGCTTATAACTCTCAAATAGGAATTAACATTACGTTACAATCCTTAGTAAATCAGTCATGGGAAA
ACCTTGAAATAATTGTAGTGAATGACTGTAGTCGTGATAATACAGAAAAAGAGGTTAGGAAATGGATGAAGGTAGATAAG
CGCATCTCTATCTTATCTACAGCAGTAAATTCAGGACCGTATGTGGCAAGAAACTTAGCTTTACGAGAAGCTACTGGGGA
ATTTGTTACGATTAATGATGCCGATGATTGGGCGCATCCTCAAAAAATTGAAAAACAAGTGAGACATTTGCTAGGTGATC
AATCAGTTGTAGCGAACAGTTCGAGGCATATTAGAGTTACTGACGATTTATTCGTTCACCGAAGAGGACAAGAAGGAAAA
TATATCTTCTCTAATATGTCATCAATTATGTTTCGCCGGACGAAGGTTATAGAGACGATTGGTTATTGGGATCCAGTTAG
ATTCGCAGGAGATAGCGAATATAAGAAACGTTTAATTCGTGCTTTTGGTCAGGAAAAAATAGTAGATCTTCCGACAGGAC
CATTAGGATTATCACTGCAATCAAAAGGTTCTCTAACAGGAGGTTCGGTATATGGATATAGTGGGTTTATGAAGGGTGCC
CGTAAAGAATATGCAGAAGCCCATCAATATGCCCATGATAAGATGAGTAATTATTATCTACCTTATAACGCAGAAGAAAG
GTTCTTTCCTGTACCGCGACCAATGAGACCAAATCGATTGAAAGAGGCTAAACATATAGTAGATATTGTACTTGTAGCTG
ATTTTCGAATTTCAGATGATTTTATCTACAAACAGTTGGAACAATTTAAAGAACAAGGATTGACCGTTGGCTTAATTCAA
ATGGGCAAGTATAACCTAATTTTAAAGAAGAACATCCATACTAATTATAGGAAAATGATAGATGGTAATTATGTAGCGAT
GTTAGTTTATGGAGAAAAAATTTATAGTGACCTAACTGTTGTATACAATCCGTTAGTATTCCAGGAAAGACAAACTTACG
TTCCTGAATTAAGTACAAAAGTAACAAGAGTTGTTGTCAATGAAGTACCTAATAGCAAAGATTCCACCTATGATTTAAGA
AAATGTGCACAACGTATTCAGAGATATACAAAATGTACTACAAAATGGATGCCGTTAAATCAACATATCCGCGAACAATT
AAGCGAAAAGCAAGCAAATGCATTGAGGTATATTCAACTATCACATGTGAATTGGGAGTGTGGGAATAATCGTAATACAC
CTAATATAAGTGATTGGGTGTTACGATCGGACGGGAGGTCAGTACAGTATGACTCAAATAAATGA

Upstream 100 bases:

>100_bases
AGCGTCGTGTGGTATGCGATAAACAACGAAGTGCAGCAGTCTCTTAAGATGATACCAAGCGAATCATATGGAGGAGTTTG
GGATAAAGGATGTATCAGTA

Downstream 100 bases:

>100_bases
AGCAGATAAAGAAAGTAATATTGCAGGAAGAGATTATTCCGAAAAATTAGATCAACTTATAGAAACAGAAGCTAAAATTG
ATAAGACGAAAGTAGAAATT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 714; Mature: 713

Protein sequence:

>714_residues
MTKDTDNYNQDLLHSRVKQMEQELHVLKNKNSLVEDQLAAYRREFYLARNIIDQLSNMKNEGIAAAKAIPAYALRRRNIK
KIYSKSYKLKDARNQLKKYKQYLYDLGFESRALRDLHWLYMNDKNVYVKKAAAWELAMWYSNKQTVDGAKEALSYLEVAA
QDETNEDLLRQIAIQKAEAHRMLGDQDKGLRLLKEVVINSSHIHSDVLLAIANLCSNENDRLFWINEVMKAYNLEPISFQ
DIGTKSLYHRLHSDYTHNDEEELLPKVTIIIPAYNSQIGINITLQSLVNQSWENLEIIVVNDCSRDNTEKEVRKWMKVDK
RISILSTAVNSGPYVARNLALREATGEFVTINDADDWAHPQKIEKQVRHLLGDQSVVANSSRHIRVTDDLFVHRRGQEGK
YIFSNMSSIMFRRTKVIETIGYWDPVRFAGDSEYKKRLIRAFGQEKIVDLPTGPLGLSLQSKGSLTGGSVYGYSGFMKGA
RKEYAEAHQYAHDKMSNYYLPYNAEERFFPVPRPMRPNRLKEAKHIVDIVLVADFRISDDFIYKQLEQFKEQGLTVGLIQ
MGKYNLILKKNIHTNYRKMIDGNYVAMLVYGEKIYSDLTVVYNPLVFQERQTYVPELSTKVTRVVVNEVPNSKDSTYDLR
KCAQRIQRYTKCTTKWMPLNQHIREQLSEKQANALRYIQLSHVNWECGNNRNTPNISDWVLRSDGRSVQYDSNK

Sequences:

>Translated_714_residues
MTKDTDNYNQDLLHSRVKQMEQELHVLKNKNSLVEDQLAAYRREFYLARNIIDQLSNMKNEGIAAAKAIPAYALRRRNIK
KIYSKSYKLKDARNQLKKYKQYLYDLGFESRALRDLHWLYMNDKNVYVKKAAAWELAMWYSNKQTVDGAKEALSYLEVAA
QDETNEDLLRQIAIQKAEAHRMLGDQDKGLRLLKEVVINSSHIHSDVLLAIANLCSNENDRLFWINEVMKAYNLEPISFQ
DIGTKSLYHRLHSDYTHNDEEELLPKVTIIIPAYNSQIGINITLQSLVNQSWENLEIIVVNDCSRDNTEKEVRKWMKVDK
RISILSTAVNSGPYVARNLALREATGEFVTINDADDWAHPQKIEKQVRHLLGDQSVVANSSRHIRVTDDLFVHRRGQEGK
YIFSNMSSIMFRRTKVIETIGYWDPVRFAGDSEYKKRLIRAFGQEKIVDLPTGPLGLSLQSKGSLTGGSVYGYSGFMKGA
RKEYAEAHQYAHDKMSNYYLPYNAEERFFPVPRPMRPNRLKEAKHIVDIVLVADFRISDDFIYKQLEQFKEQGLTVGLIQ
MGKYNLILKKNIHTNYRKMIDGNYVAMLVYGEKIYSDLTVVYNPLVFQERQTYVPELSTKVTRVVVNEVPNSKDSTYDLR
KCAQRIQRYTKCTTKWMPLNQHIREQLSEKQANALRYIQLSHVNWECGNNRNTPNISDWVLRSDGRSVQYDSNK
>Mature_713_residues
TKDTDNYNQDLLHSRVKQMEQELHVLKNKNSLVEDQLAAYRREFYLARNIIDQLSNMKNEGIAAAKAIPAYALRRRNIKK
IYSKSYKLKDARNQLKKYKQYLYDLGFESRALRDLHWLYMNDKNVYVKKAAAWELAMWYSNKQTVDGAKEALSYLEVAAQ
DETNEDLLRQIAIQKAEAHRMLGDQDKGLRLLKEVVINSSHIHSDVLLAIANLCSNENDRLFWINEVMKAYNLEPISFQD
IGTKSLYHRLHSDYTHNDEEELLPKVTIIIPAYNSQIGINITLQSLVNQSWENLEIIVVNDCSRDNTEKEVRKWMKVDKR
ISILSTAVNSGPYVARNLALREATGEFVTINDADDWAHPQKIEKQVRHLLGDQSVVANSSRHIRVTDDLFVHRRGQEGKY
IFSNMSSIMFRRTKVIETIGYWDPVRFAGDSEYKKRLIRAFGQEKIVDLPTGPLGLSLQSKGSLTGGSVYGYSGFMKGAR
KEYAEAHQYAHDKMSNYYLPYNAEERFFPVPRPMRPNRLKEAKHIVDIVLVADFRISDDFIYKQLEQFKEQGLTVGLIQM
GKYNLILKKNIHTNYRKMIDGNYVAMLVYGEKIYSDLTVVYNPLVFQERQTYVPELSTKVTRVVVNEVPNSKDSTYDLRK
CAQRIQRYTKCTTKWMPLNQHIREQLSEKQANALRYIQLSHVNWECGNNRNTPNISDWVLRSDGRSVQYDSNK

Specific function: Unknown

COG id: COG0463

COG function: function code M; Glycosyltransferases involved in cell wall biogenesis

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the glycosyltransferase 2 family [H]

Homologues:

Organism=Escherichia coli, GI1790044, Length=116, Percent_Identity=35.3448275862069, Blast_Score=73, Evalue=6e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001173 [H]

Pfam domain/function: PF00535 Glycos_transf_2 [H]

EC number: 2.-.-.- [C]

Molecular weight: Translated: 83009; Mature: 82877

Theoretical pI: Translated: 9.49; Mature: 9.49

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTKDTDNYNQDLLHSRVKQMEQELHVLKNKNSLVEDQLAAYRREFYLARNIIDQLSNMKN
CCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
EGIAAAKAIPAYALRRRNIKKIYSKSYKLKDARNQLKKYKQYLYDLGFESRALRDLHWLY
CCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHEEEEE
MNDKNVYVKKAAAWELAMWYSNKQTVDGAKEALSYLEVAAQDETNEDLLRQIAIQKAEAH
ECCCCEEEEEHHHEEEEEEECCCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHH
RMLGDQDKGLRLLKEVVINSSHIHSDVLLAIANLCSNENDRLFWINEVMKAYNLEPISFQ
HHCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCEEEHHHHHHHHCCCCCCHH
DIGTKSLYHRLHSDYTHNDEEELLPKVTIIIPAYNSQIGINITLQSLVNQSWENLEIIVV
HCCHHHHHHHHHCCCCCCCHHHHCCEEEEEEEECCCCEEEEEEHHHHHCCCCCCEEEEEE
NDCSRDNTEKEVRKWMKVDKRISILSTAVNSGPYVARNLALREATGEFVTINDADDWAHP
ECCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCCEEEEECCCCCCCH
QKIEKQVRHLLGDQSVVANSSRHIRVTDDLFVHRRGQEGKYIFSNMSSIMFRRTKVIETI
HHHHHHHHHHHCCCCEEECCCCEEEEECHHHEEECCCCCCHHHHHHHHHHHHHHHHHHHH
GYWDPVRFAGDSEYKKRLIRAFGQEKIVDLPTGPLGLSLQSKGSLTGGSVYGYSGFMKGA
CCCCCEEECCCHHHHHHHHHHHCCCCEEECCCCCCCCEECCCCCCCCCCCCCHHHHHHHH
RKEYAEAHQYAHDKMSNYYLPYNAEERFFPVPRPMRPNRLKEAKHIVDIVLVADFRISDD
HHHHHHHHHHHHHHHCCEECCCCCCCCEECCCCCCCCHHHHHHHHHEEEEEEECCCCCHH
FIYKQLEQFKEQGLTVGLIQMGKYNLILKKNIHTNYRKMIDGNYVAMLVYGEKIYSDLTV
HHHHHHHHHHHCCCEEEEEECCCEEEEEECCCCHHHHHHHCCCEEEEEEECHHHHHCHHH
VYNPLVFQERQTYVPELSTKVTRVVVNEVPNSKDSTYDLRKCAQRIQRYTKCTTKWMPLN
HHCCHHHHCHHHHCCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCHH
QHIREQLSEKQANALRYIQLSHVNWECGNNRNTPNISDWVLRSDGRSVQYDSNK
HHHHHHHHHHHHHHEEEEEEEEEEEECCCCCCCCCHHHHEEECCCCEECCCCCC
>Mature Secondary Structure 
TKDTDNYNQDLLHSRVKQMEQELHVLKNKNSLVEDQLAAYRREFYLARNIIDQLSNMKN
CCCCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
EGIAAAKAIPAYALRRRNIKKIYSKSYKLKDARNQLKKYKQYLYDLGFESRALRDLHWLY
CCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHEEEEE
MNDKNVYVKKAAAWELAMWYSNKQTVDGAKEALSYLEVAAQDETNEDLLRQIAIQKAEAH
ECCCCEEEEEHHHEEEEEEECCCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHH
RMLGDQDKGLRLLKEVVINSSHIHSDVLLAIANLCSNENDRLFWINEVMKAYNLEPISFQ
HHCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCEEEHHHHHHHHCCCCCCHH
DIGTKSLYHRLHSDYTHNDEEELLPKVTIIIPAYNSQIGINITLQSLVNQSWENLEIIVV
HCCHHHHHHHHHCCCCCCCHHHHCCEEEEEEEECCCCEEEEEEHHHHHCCCCCCEEEEEE
NDCSRDNTEKEVRKWMKVDKRISILSTAVNSGPYVARNLALREATGEFVTINDADDWAHP
ECCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCCEEEEECCCCCCCH
QKIEKQVRHLLGDQSVVANSSRHIRVTDDLFVHRRGQEGKYIFSNMSSIMFRRTKVIETI
HHHHHHHHHHHCCCCEEECCCCEEEEECHHHEEECCCCCCHHHHHHHHHHHHHHHHHHHH
GYWDPVRFAGDSEYKKRLIRAFGQEKIVDLPTGPLGLSLQSKGSLTGGSVYGYSGFMKGA
CCCCCEEECCCHHHHHHHHHHHCCCCEEECCCCCCCCEECCCCCCCCCCCCCHHHHHHHH
RKEYAEAHQYAHDKMSNYYLPYNAEERFFPVPRPMRPNRLKEAKHIVDIVLVADFRISDD
HHHHHHHHHHHHHHHCCEECCCCCCCCEECCCCCCCCHHHHHHHHHEEEEEEECCCCCHH
FIYKQLEQFKEQGLTVGLIQMGKYNLILKKNIHTNYRKMIDGNYVAMLVYGEKIYSDLTV
HHHHHHHHHHHCCCEEEEEECCCEEEEEECCCCHHHHHHHCCCEEEEEEECHHHHHCHHH
VYNPLVFQERQTYVPELSTKVTRVVVNEVPNSKDSTYDLRKCAQRIQRYTKCTTKWMPLN
HHCCHHHHCHHHHCCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCHH
QHIREQLSEKQANALRYIQLSHVNWECGNNRNTPNISDWVLRSDGRSVQYDSNK
HHHHHHHHHHHHHHEEEEEEEEEEEECCCCCCCCCHHHHEEECCCCEECCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]