| Definition | Oceanobacillus iheyensis HTE831, complete genome. |
|---|---|
| Accession | NC_004193 |
| Length | 3,630,528 |
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The map label for this gene is cwlC [H]
Identifier: 23100367
GI number: 23100367
Start: 3003414
End: 3006230
Strand: Reverse
Name: cwlC [H]
Synonym: OB2912
Alternate gene names: 23100367
Gene position: 3006230-3003414 (Counterclockwise)
Preceding gene: 23100369
Following gene: 23100366
Centisome position: 82.8
GC content: 36.03
Gene sequence:
>2817_bases GTGATAAGGAAGAATTTCGTAATATTATTGATAAGTATTATGGTTTTGTTTCACTTTAGTCCAGCAATTACTCATGCCAA TACGGCGAGTAATGGAGAAGAAGAGCAAACTTCTCAAAAGGAAAATCAATCTAGTGAAGAGGTAAATAAAGATAGTGATG TTCCTCAAAAAGATGATTTTCAAGAGGAAGTAGAAGAAGATAATAACGAATCTTCTCAAGAAAATGAAAACTCTTCATCC CAAGATAAAGAAGTAGATAACAAAGAGGAGGAAGATTCTGAAGAAGAACATATTTCTAATGAAAATTCTTCGGAAGAACA AGAAACAACTCCTCGAGAGGAAGAGGAAGAAGGAAAATCTGATTCTGAGCAGGTGGAACCTTTTGCAGTGGATGCTTCAA TTCCATATGAAAAAGGAGATCGCCATGAGGATCTTGTAGAGATCAAAGAAAAATTAAATCATATTGGTTTTGATGGTATC ACAGAAACGGATTACTTCGGTAATTGGACGGAAACGCGTGTGACCCAGTTCCAAACATATTACCAATTATCCGTAACAGG GAAAGTAGATCAAAAAACCATCAATAAATTAGATAGTGTTTACAATAGCCCTTTCCAAAATGGCAAACGCCATGAAGATA CAAAGGCGATTAAAGAAAAGCTGAATAGTATCGGATATGGACCGATTACGGTAACAACGTTATTTGGCAATTACATGGAA AGCCAAGTGAAAGAGTTCCAACGTGATCAAGGATTGCGCGTGAATGGAATTGCGGATGAGCGTACGCTAGCGAAGCTGGA AGAATTGGCATCTACCGATGTATTTGAATTAGGAGACCGTCATAATGCAATTATTATTATCAAAGAAAAGCTAAATGCGA TCGGTTTTGGTGGTATATCTGAAACCAATTACTTTGGAGGTTGGACAGAGACCCGTGTCAAACAATTCCAGCAATATTAT GGATTGAGTGTGGATGGAAAAGTAGGTCCAGCAACACAAGAAACACTAGATAGCGTCTACAATAGTCCGTTCCAGAATGG CAAACGTCATGAAGATACAAAAGCAATCAAAGAAAAGCTAAATAGCATTGGATATGGGCCAATCACGGTAACGACGTTAT TTGGCAACTACATGGAAAGCCAAGTGAAAGAGTTCCAGCGTGATCAAGGATTACGCGAGAATGGAATTGCGGATGCACCA ACGTTAGCGAAGCTGGAGGAATTGGCATCTACCGATGTATTTGAATTAGGAGACCGTCATAGTGCAATTATTACTATCAA ACAAAAGCTAAATGCGATTGGCTTCGATCGTATATCCGAGACGGATTATTTTGGTGGCTGGACAGAGACTCGCGTCCGAC AATTTCAGGAATATTATAACCTAAATGTGACTGGAAAAGCAGATGAAGCTACTCAAAATAAACTGGATGAAGTCTATAAT AGTCCTTTCCAAGCAGGGAAACGTCACGAAGATACGATAGAACTAAAAGAAAAGTTGAATCGTCTAGGCTATGGTCATAT TACAGTATCTACTTTATATGGCAACTATACAAAATCACAAGTAAAAGAATTCCAACGTGATTTTGGATTAGTCGTAAATG GAATAGCAGATGAAAATACCTGGATAAAATTGAATGAAGTCTATTATAAAACAGGTTTCCAGCTGGGAGACCGTCATGAA GATATCATAGAGATTAAGAAGCAACTTAATGCCATTGGATTTGGTGGTATAACTGAAACGAACTACTTTGGAAAATGGAC GGAAACTCGTGTCGAACAATTCCAACGATATTATGGTCTTTCGGTTACTGGTACCGCTGACGAACAAACACAGCAAAAGC TATCGGACGTGTATAATAGTCCATACCAAAATGGTAAACGTCATGACGGAACCATTGAATTAAAAGAGAAACTCAATCGT ATTGGTTTCGGTTATATAACTGTTTCTACCCTATATGGTAGTTTTACAGAATCCCAAGTGAAGAAGTTTCAAGAGTATTA TGGCTTGAAGGTCAATGGAATAGCTGATGAAGTAACTATGGATATGATTAATGAAATATATAATAGTCCATTACAAAAAG GTAAATCAGATTCTCGCGTAATTGAGATGAAAGAAATGCTTAATGCGCTAGGTTATGATGGTATCACTATAAGCGATTAT TTTGGAAATTGGACAGAAACAAGATTAAAGCAATTCCAATCAGATTATAATCTTCCGGTTAGTGGTATAGCAGATACAAA AACGATTCAGAAACTAGATGATAGTGTAATTAGAGTATTTCTAGACCCAGGTCATGGAGGAAATGATCCTGGAGGGCAAG GTTATGGTATTAACGAAAAAGATGTCGTGTTAGATATAGCGCTTCAGACGGAACAATTCTTATCATCGAAATATAAGGGA GTTCTTGTAAATATGTCAAGAACAGATGATACTTTTATAGAATTAACGGAAAGAGCTAATATGGCAAACCGTTGGGGAGC AGATTATTTTGTTAGTTTCCATACCAACGCTTTTAATGGATCGGCAAATGGATTTGAAACATATATCCATAATGGAAATG TTTCAAATGAAACAAAGCAAAGACAATCTGATGTTCATTCTTATTTAATTAATAACATTAATGTAAATGATCGAGGTAAG AAGACAGCAAACTTTAATGTATTAAGAAATACAAATATGTCTTCTATTCTATTAGAATATATGTTTATCGATAATTTTGT TGAAAATATGCTTTTAAAAGATCCAAGTTATCGTACATATTTGGCTCAAATAACCGCAGATGCAATAGCGAATTCTTATA ATTTAAAAAGAAGATAA
Upstream 100 bases:
>100_bases AATTACAAATTAGATACAAAGATGTAATTTTATTTATTGTAAACCTTTACCAATACTAGATTAGTAAGTTAGTATAAGTA TAAAGGAGGTGAGAACTAAA
Downstream 100 bases:
>100_bases TTCTATTAAAAAGACTATCAAATAAGGTAGTCTTTTTTTAATAATCTATTCAATTTTAATAATAATAACCGATATTAGAT TAGTAGTATTTTATAAAATC
Product: N-acetylmuramoyl-L-alanine amidase
Products: NA
Alternate protein names: Autolysin; Cell wall hydrolase [H]
Number of amino acids: Translated: 938; Mature: 938
Protein sequence:
>938_residues MIRKNFVILLISIMVLFHFSPAITHANTASNGEEEQTSQKENQSSEEVNKDSDVPQKDDFQEEVEEDNNESSQENENSSS QDKEVDNKEEEDSEEEHISNENSSEEQETTPREEEEEGKSDSEQVEPFAVDASIPYEKGDRHEDLVEIKEKLNHIGFDGI TETDYFGNWTETRVTQFQTYYQLSVTGKVDQKTINKLDSVYNSPFQNGKRHEDTKAIKEKLNSIGYGPITVTTLFGNYME SQVKEFQRDQGLRVNGIADERTLAKLEELASTDVFELGDRHNAIIIIKEKLNAIGFGGISETNYFGGWTETRVKQFQQYY GLSVDGKVGPATQETLDSVYNSPFQNGKRHEDTKAIKEKLNSIGYGPITVTTLFGNYMESQVKEFQRDQGLRENGIADAP TLAKLEELASTDVFELGDRHSAIITIKQKLNAIGFDRISETDYFGGWTETRVRQFQEYYNLNVTGKADEATQNKLDEVYN SPFQAGKRHEDTIELKEKLNRLGYGHITVSTLYGNYTKSQVKEFQRDFGLVVNGIADENTWIKLNEVYYKTGFQLGDRHE DIIEIKKQLNAIGFGGITETNYFGKWTETRVEQFQRYYGLSVTGTADEQTQQKLSDVYNSPYQNGKRHDGTIELKEKLNR IGFGYITVSTLYGSFTESQVKKFQEYYGLKVNGIADEVTMDMINEIYNSPLQKGKSDSRVIEMKEMLNALGYDGITISDY FGNWTETRLKQFQSDYNLPVSGIADTKTIQKLDDSVIRVFLDPGHGGNDPGGQGYGINEKDVVLDIALQTEQFLSSKYKG VLVNMSRTDDTFIELTERANMANRWGADYFVSFHTNAFNGSANGFETYIHNGNVSNETKQRQSDVHSYLINNINVNDRGK KTANFNVLRNTNMSSILLEYMFIDNFVENMLLKDPSYRTYLAQITADAIANSYNLKRR
Sequences:
>Translated_938_residues MIRKNFVILLISIMVLFHFSPAITHANTASNGEEEQTSQKENQSSEEVNKDSDVPQKDDFQEEVEEDNNESSQENENSSS QDKEVDNKEEEDSEEEHISNENSSEEQETTPREEEEEGKSDSEQVEPFAVDASIPYEKGDRHEDLVEIKEKLNHIGFDGI TETDYFGNWTETRVTQFQTYYQLSVTGKVDQKTINKLDSVYNSPFQNGKRHEDTKAIKEKLNSIGYGPITVTTLFGNYME SQVKEFQRDQGLRVNGIADERTLAKLEELASTDVFELGDRHNAIIIIKEKLNAIGFGGISETNYFGGWTETRVKQFQQYY GLSVDGKVGPATQETLDSVYNSPFQNGKRHEDTKAIKEKLNSIGYGPITVTTLFGNYMESQVKEFQRDQGLRENGIADAP TLAKLEELASTDVFELGDRHSAIITIKQKLNAIGFDRISETDYFGGWTETRVRQFQEYYNLNVTGKADEATQNKLDEVYN SPFQAGKRHEDTIELKEKLNRLGYGHITVSTLYGNYTKSQVKEFQRDFGLVVNGIADENTWIKLNEVYYKTGFQLGDRHE DIIEIKKQLNAIGFGGITETNYFGKWTETRVEQFQRYYGLSVTGTADEQTQQKLSDVYNSPYQNGKRHDGTIELKEKLNR IGFGYITVSTLYGSFTESQVKKFQEYYGLKVNGIADEVTMDMINEIYNSPLQKGKSDSRVIEMKEMLNALGYDGITISDY FGNWTETRLKQFQSDYNLPVSGIADTKTIQKLDDSVIRVFLDPGHGGNDPGGQGYGINEKDVVLDIALQTEQFLSSKYKG VLVNMSRTDDTFIELTERANMANRWGADYFVSFHTNAFNGSANGFETYIHNGNVSNETKQRQSDVHSYLINNINVNDRGK KTANFNVLRNTNMSSILLEYMFIDNFVENMLLKDPSYRTYLAQITADAIANSYNLKRR >Mature_938_residues MIRKNFVILLISIMVLFHFSPAITHANTASNGEEEQTSQKENQSSEEVNKDSDVPQKDDFQEEVEEDNNESSQENENSSS QDKEVDNKEEEDSEEEHISNENSSEEQETTPREEEEEGKSDSEQVEPFAVDASIPYEKGDRHEDLVEIKEKLNHIGFDGI TETDYFGNWTETRVTQFQTYYQLSVTGKVDQKTINKLDSVYNSPFQNGKRHEDTKAIKEKLNSIGYGPITVTTLFGNYME SQVKEFQRDQGLRVNGIADERTLAKLEELASTDVFELGDRHNAIIIIKEKLNAIGFGGISETNYFGGWTETRVKQFQQYY GLSVDGKVGPATQETLDSVYNSPFQNGKRHEDTKAIKEKLNSIGYGPITVTTLFGNYMESQVKEFQRDQGLRENGIADAP TLAKLEELASTDVFELGDRHSAIITIKQKLNAIGFDRISETDYFGGWTETRVRQFQEYYNLNVTGKADEATQNKLDEVYN SPFQAGKRHEDTIELKEKLNRLGYGHITVSTLYGNYTKSQVKEFQRDFGLVVNGIADENTWIKLNEVYYKTGFQLGDRHE DIIEIKKQLNAIGFGGITETNYFGKWTETRVEQFQRYYGLSVTGTADEQTQQKLSDVYNSPYQNGKRHDGTIELKEKLNR IGFGYITVSTLYGSFTESQVKKFQEYYGLKVNGIADEVTMDMINEIYNSPLQKGKSDSRVIEMKEMLNALGYDGITISDY FGNWTETRLKQFQSDYNLPVSGIADTKTIQKLDDSVIRVFLDPGHGGNDPGGQGYGINEKDVVLDIALQTEQFLSSKYKG VLVNMSRTDDTFIELTERANMANRWGADYFVSFHTNAFNGSANGFETYIHNGNVSNETKQRQSDVHSYLINNINVNDRGK KTANFNVLRNTNMSSILLEYMFIDNFVENMLLKDPSYRTYLAQITADAIANSYNLKRR
Specific function: Autolysins are involved in some important biological processes such as cell separation, cell-wall turnover, competence for genetic transformation, formation of the flagella - in particular of its basal body - and sporulation. CwlC is able to hydrolyze typ
COG id: COG3409
COG function: function code M; Putative peptidoglycan-binding domain-containing protein
Gene ontology:
Cell location: Secreted, cell wall. Note=Is associated with the mother cell wall of sporulating cells [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the N-acetylmuramoyl-L-alanine amidase 3 family [H]
Homologues:
Organism=Escherichia coli, GI87082163, Length=233, Percent_Identity=30.0429184549356, Blast_Score=75, Evalue=2e-14, Organism=Escherichia coli, GI1788776, Length=221, Percent_Identity=26.2443438914027, Blast_Score=73, Evalue=7e-14,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002508 - InterPro: IPR007730 [H]
Pfam domain/function: PF01520 Amidase_3; PF05036 SPOR [H]
EC number: =3.5.1.28 [H]
Molecular weight: Translated: 106809; Mature: 106809
Theoretical pI: Translated: 4.56; Mature: 4.56
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 1.4 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 1.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIRKNFVILLISIMVLFHFSPAITHANTASNGEEEQTSQKENQSSEEVNKDSDVPQKDDF CCCCHHHHHHHHHHHHHHCCHHHCCCCCCCCCCHHHHHHHHCCCHHHCCCCCCCCCCCCH QEEVEEDNNESSQENENSSSQDKEVDNKEEEDSEEEHISNENSSEEQETTPREEEEEGKS HHHHHCCCCCCCCCCCCCCCHHHHCCCCCCCCCHHHHHCCCCCCCHHHCCCCCHHHHCCC DSEQVEPFAVDASIPYEKGDRHEDLVEIKEKLNHIGFDGITETDYFGNWTETRVTQFQTY CCHHCCCEEEECCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHEEE YQLSVTGKVDQKTINKLDSVYNSPFQNGKRHEDTKAIKEKLNSIGYGPITVTTLFGNYME EEEEEECCCHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHCCCCCEEHHHHHHHHHH SQVKEFQRDQGLRVNGIADERTLAKLEELASTDVFELGDRHNAIIIIKEKLNAIGFGGIS HHHHHHHHHCCCEEECCCCHHHHHHHHHHHCCCHHHCCCCCCEEEEECCCCCEEECCCCC ETNYFGGWTETRVKQFQQYYGLSVDGKVGPATQETLDSVYNSPFQNGKRHEDTKAIKEKL CCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCHHHHHHHHHH NSIGYGPITVTTLFGNYMESQVKEFQRDQGLRENGIADAPTLAKLEELASTDVFELGDRH HHCCCCCEEHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHCCCHHHCCCCC SAIITIKQKLNAIGFDRISETDYFGGWTETRVRQFQEYYNLNVTGKADEATQNKLDEVYN CEEEEEHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHC SPFQAGKRHEDTIELKEKLNRLGYGHITVSTLYGNYTKSQVKEFQRDFGLVVNGIADENT CHHHCCCCCCHHHHHHHHHHHCCCCEEEEEEECCCCHHHHHHHHHHHHCCEEECCCCCCC WIKLNEVYYKTGFQLGDRHEDIIEIKKQLNAIGFGGITETNYFGKWTETRVEQFQRYYGL EEEEEHHHEECCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHCC SVTGTADEQTQQKLSDVYNSPYQNGKRHDGTIELKEKLNRIGFGYITVSTLYGSFTESQV EEECCCCHHHHHHHHHHHCCCCCCCCCCCCEEHHHHHHHHHCCCEEEHHHHHCCHHHHHH KKFQEYYGLKVNGIADEVTMDMINEIYNSPLQKGKSDSRVIEMKEMLNALGYDGITISDY HHHHHHHCEEEECCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCEEEEHH FGNWTETRLKQFQSDYNLPVSGIADTKTIQKLDDSVIRVFLDPGHGGNDPGGQGYGINEK HCCHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHEEEEEECCCCCCCCCCCCCCCCCCC DVVLDIALQTEQFLSSKYKGVLVNMSRTDDTFIELTERANMANRWGADYFVSFHTNAFNG CEEEEEEHHHHHHHHHCCCEEEEECCCCCCHHHHHHHHCCHHHHCCCCEEEEEECCCCCC SANGFETYIHNGNVSNETKQRQSDVHSYLINNINVNDRGKKTANFNVLRNTNMSSILLEY CCCCHHHEEECCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEECCCHHHHHHHH MFIDNFVENMLLKDPSYRTYLAQITADAIANSYNLKRR HHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCCC >Mature Secondary Structure MIRKNFVILLISIMVLFHFSPAITHANTASNGEEEQTSQKENQSSEEVNKDSDVPQKDDF CCCCHHHHHHHHHHHHHHCCHHHCCCCCCCCCCHHHHHHHHCCCHHHCCCCCCCCCCCCH QEEVEEDNNESSQENENSSSQDKEVDNKEEEDSEEEHISNENSSEEQETTPREEEEEGKS HHHHHCCCCCCCCCCCCCCCHHHHCCCCCCCCCHHHHHCCCCCCCHHHCCCCCHHHHCCC DSEQVEPFAVDASIPYEKGDRHEDLVEIKEKLNHIGFDGITETDYFGNWTETRVTQFQTY CCHHCCCEEEECCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHEEE YQLSVTGKVDQKTINKLDSVYNSPFQNGKRHEDTKAIKEKLNSIGYGPITVTTLFGNYME EEEEEECCCHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHCCCCCEEHHHHHHHHHH SQVKEFQRDQGLRVNGIADERTLAKLEELASTDVFELGDRHNAIIIIKEKLNAIGFGGIS HHHHHHHHHCCCEEECCCCHHHHHHHHHHHCCCHHHCCCCCCEEEEECCCCCEEECCCCC ETNYFGGWTETRVKQFQQYYGLSVDGKVGPATQETLDSVYNSPFQNGKRHEDTKAIKEKL CCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCHHHHHHHHHH NSIGYGPITVTTLFGNYMESQVKEFQRDQGLRENGIADAPTLAKLEELASTDVFELGDRH HHCCCCCEEHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHCCCHHHCCCCC SAIITIKQKLNAIGFDRISETDYFGGWTETRVRQFQEYYNLNVTGKADEATQNKLDEVYN CEEEEEHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHC SPFQAGKRHEDTIELKEKLNRLGYGHITVSTLYGNYTKSQVKEFQRDFGLVVNGIADENT CHHHCCCCCCHHHHHHHHHHHCCCCEEEEEEECCCCHHHHHHHHHHHHCCEEECCCCCCC WIKLNEVYYKTGFQLGDRHEDIIEIKKQLNAIGFGGITETNYFGKWTETRVEQFQRYYGL EEEEEHHHEECCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHCC SVTGTADEQTQQKLSDVYNSPYQNGKRHDGTIELKEKLNRIGFGYITVSTLYGSFTESQV EEECCCCHHHHHHHHHHHCCCCCCCCCCCCEEHHHHHHHHHCCCEEEHHHHHCCHHHHHH KKFQEYYGLKVNGIADEVTMDMINEIYNSPLQKGKSDSRVIEMKEMLNALGYDGITISDY HHHHHHHCEEEECCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCEEEEHH FGNWTETRLKQFQSDYNLPVSGIADTKTIQKLDDSVIRVFLDPGHGGNDPGGQGYGINEK HCCHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHEEEEEECCCCCCCCCCCCCCCCCCC DVVLDIALQTEQFLSSKYKGVLVNMSRTDDTFIELTERANMANRWGADYFVSFHTNAFNG CEEEEEEHHHHHHHHHCCCEEEEECCCCCCHHHHHHHHCCHHHHCCCCEEEEEECCCCCC SANGFETYIHNGNVSNETKQRQSDVHSYLINNINVNDRGKKTANFNVLRNTNMSSILLEY CCCCHHHEEECCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEECCCHHHHHHHH MFIDNFVENMLLKDPSYRTYLAQITADAIANSYNLKRR HHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8407798; 9384377 [H]