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The map label for this gene is cdaR [H]

Identifier: 23100239

GI number: 23100239

Start: 2861784

End: 2862917

Strand: Direct

Name: cdaR [H]

Synonym: OB2784

Alternate gene names: 23100239

Gene position: 2861784-2862917 (Clockwise)

Preceding gene: 28563946

Following gene: 23100240

Centisome position: 78.83

GC content: 34.92

Gene sequence:

>1134_bases
ATGACCATCTTAACAGAACAATTAGCAAGTCAAATCGTCCAACGCACTATGTCCATTATACATGCCAATATAAATATTAT
GGATCGAACAGGAACAATCATCGCTTCAGGTAACCCTTCTAGAATTGGTCAGTTACATGATGGCGCTGTTCAAGTAATTA
AAGAAAAACGAACGATCGAAATTGACACATCAGGAGCGACTCATTGGCAAAGCTCTCAATCAGGGATTAACTTACCGATT
ACTTTTCAAAACAATATTATAGGTGTTATCGGGATAACAGGCCCCCCTGATAAAATCCGTGATTATTCTCAATTAATCCA
AATGGGAGCTGAACTAACTTTAGAGCAAGCTTTTTTAACAAATGAAATCCAGCAAAACAAACAAATTCGCCAAAATCAAA
TTACGAATATTCTTTTGGGTACAGAACAAGATCAAACATATATTCAAGAAAGAGCTCACTATGCAAAACTAGATATCCAA
ACAACCTATGCTGTGATTATAATATTTACTCCCGTCTTAGATAAAAAACATACAGAAGAGGTAGAGAAACATATTCAATC
TTGGCTAAATCATGAAGATGAACATATCCGATTATTTACAAATCAACATCTTATACTTAAAAAGGAAATTGGATATTCTA
ACCCTGCTCATATAAAGGATATATTAGTAGAAAAGCATAAGAATTCTTCCATCCCCAATATGACAATTGCAGTCGGGTCT
TATTTAACGGGAGTAGACGGTTGGAGACAATCCTATCAACAAGCTCAAAAAATAATCGAAGTCACAAAAACGTTGTATCC
CTCCGGTGGGGTTTGGAATTATGAAGACTTAAGTCTCGAAATCTTGGCTTATGATTTGCTCAAGAATAAACCGCAGTCAG
CGAAAGAGCTGACTACGACATATCAACGCATTCTTACAGAGAGTGATGGAATACAACTGCATCAAACATTACAAACTTAT
ATCGAAGAAAACGGAAAAGTGTCCATTACATCTGATAAGCTATTTATTCATCGAAATACATTGACCTATCGACTCGATAA
AATACATCAAATCACTGGAAAAGATCCTAGAAATATCAATCATCTTCTAGAATTAAAAATGGCAAGCCTTTTGTATGATC
TAGAATCAAACTAA

Upstream 100 bases:

>100_bases
TATTTATTCTGTCAAGTGTCTATAGTAGATAGTATAATTCATAAAGAACTTTCTATCGCTAAGATATCCTATATACTATA
CATAGAAATACGTGGAGGTG

Downstream 100 bases:

>100_bases
CACCTGATTCATGCAAACGCACAAAAACACCTAGTTGAAAACGTTACCTTTTTGTTCATGTGACTAATGATATCCACTGC
TGATAACGCTTACAATAAAG

Product: hypothetical protein

Products: NA

Alternate protein names: Sugar diacid regulator [H]

Number of amino acids: Translated: 377; Mature: 376

Protein sequence:

>377_residues
MTILTEQLASQIVQRTMSIIHANINIMDRTGTIIASGNPSRIGQLHDGAVQVIKEKRTIEIDTSGATHWQSSQSGINLPI
TFQNNIIGVIGITGPPDKIRDYSQLIQMGAELTLEQAFLTNEIQQNKQIRQNQITNILLGTEQDQTYIQERAHYAKLDIQ
TTYAVIIIFTPVLDKKHTEEVEKHIQSWLNHEDEHIRLFTNQHLILKKEIGYSNPAHIKDILVEKHKNSSIPNMTIAVGS
YLTGVDGWRQSYQQAQKIIEVTKTLYPSGGVWNYEDLSLEILAYDLLKNKPQSAKELTTTYQRILTESDGIQLHQTLQTY
IEENGKVSITSDKLFIHRNTLTYRLDKIHQITGKDPRNINHLLELKMASLLYDLESN

Sequences:

>Translated_377_residues
MTILTEQLASQIVQRTMSIIHANINIMDRTGTIIASGNPSRIGQLHDGAVQVIKEKRTIEIDTSGATHWQSSQSGINLPI
TFQNNIIGVIGITGPPDKIRDYSQLIQMGAELTLEQAFLTNEIQQNKQIRQNQITNILLGTEQDQTYIQERAHYAKLDIQ
TTYAVIIIFTPVLDKKHTEEVEKHIQSWLNHEDEHIRLFTNQHLILKKEIGYSNPAHIKDILVEKHKNSSIPNMTIAVGS
YLTGVDGWRQSYQQAQKIIEVTKTLYPSGGVWNYEDLSLEILAYDLLKNKPQSAKELTTTYQRILTESDGIQLHQTLQTY
IEENGKVSITSDKLFIHRNTLTYRLDKIHQITGKDPRNINHLLELKMASLLYDLESN
>Mature_376_residues
TILTEQLASQIVQRTMSIIHANINIMDRTGTIIASGNPSRIGQLHDGAVQVIKEKRTIEIDTSGATHWQSSQSGINLPIT
FQNNIIGVIGITGPPDKIRDYSQLIQMGAELTLEQAFLTNEIQQNKQIRQNQITNILLGTEQDQTYIQERAHYAKLDIQT
TYAVIIIFTPVLDKKHTEEVEKHIQSWLNHEDEHIRLFTNQHLILKKEIGYSNPAHIKDILVEKHKNSSIPNMTIAVGSY
LTGVDGWRQSYQQAQKIIEVTKTLYPSGGVWNYEDLSLEILAYDLLKNKPQSAKELTTTYQRILTESDGIQLHQTLQTYI
EENGKVSITSDKLFIHRNTLTYRLDKIHQITGKDPRNINHLLELKMASLLYDLESN

Specific function: Seems to regulate the expression of the operons for the enzymes involved in D-galactarate, D-glucarate and D-glycerate utilization [H]

COG id: COG3835

COG function: function code KT; Sugar diacid utilization regulator

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the CdaR family [H]

Homologues:

Organism=Escherichia coli, GI87081694, Length=378, Percent_Identity=32.5396825396825, Blast_Score=184, Evalue=1e-47,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR008599 [H]

Pfam domain/function: PF05651 Diacid_rec [H]

EC number: NA

Molecular weight: Translated: 42985; Mature: 42853

Theoretical pI: Translated: 6.69; Mature: 6.69

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
1.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
1.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTILTEQLASQIVQRTMSIIHANINIMDRTGTIIASGNPSRIGQLHDGAVQVIKEKRTIE
CCCHHHHHHHHHHHHHHHHHHHCCEEEECCCEEEECCCCHHCCCCCHHHHHHHHCCCEEE
IDTSGATHWQSSQSGINLPITFQNNIIGVIGITGPPDKIRDYSQLIQMGAELTLEQAFLT
EECCCCCCCCCCCCCCEEEEEECCCEEEEEECCCCHHHHHHHHHHHHHCHHHHHHHHHHH
NEIQQNKQIRQNQITNILLGTEQDQTYIQERAHYAKLDIQTTYAVIIIFTPVLDKKHTEE
HHHHHHHHHHHHHHHEEEEECCCHHHHHHHHHHHEEEEEEHHEEEEEEEECCCCCCHHHH
VEKHIQSWLNHEDEHIRLFTNQHLILKKEIGYSNPAHIKDILVEKHKNSSIPNMTIAVGS
HHHHHHHHHCCCCCEEEEEECCEEEEEECCCCCCCHHHHHHHHHHCCCCCCCEEEEEHHH
YLTGVDGWRQSYQQAQKIIEVTKTLYPSGGVWNYEDLSLEILAYDLLKNKPQSAKELTTT
HHHCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHEEEHHHCCCCCHHHHHHHH
YQRILTESDGIQLHQTLQTYIEENGKVSITSDKLFIHRNTLTYRLDKIHQITGKDPRNIN
HHHHHCCCCCCHHHHHHHHHHHCCCCEEEECCEEEEEECCHHHHHHHHHHHCCCCCCHHH
HLLELKMASLLYDLESN
HHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
TILTEQLASQIVQRTMSIIHANINIMDRTGTIIASGNPSRIGQLHDGAVQVIKEKRTIE
CCHHHHHHHHHHHHHHHHHHHCCEEEECCCEEEECCCCHHCCCCCHHHHHHHHCCCEEE
IDTSGATHWQSSQSGINLPITFQNNIIGVIGITGPPDKIRDYSQLIQMGAELTLEQAFLT
EECCCCCCCCCCCCCCEEEEEECCCEEEEEECCCCHHHHHHHHHHHHHCHHHHHHHHHHH
NEIQQNKQIRQNQITNILLGTEQDQTYIQERAHYAKLDIQTTYAVIIIFTPVLDKKHTEE
HHHHHHHHHHHHHHHEEEEECCCHHHHHHHHHHHEEEEEEHHEEEEEEEECCCCCCHHHH
VEKHIQSWLNHEDEHIRLFTNQHLILKKEIGYSNPAHIKDILVEKHKNSSIPNMTIAVGS
HHHHHHHHHCCCCCEEEEEECCEEEEEECCCCCCCHHHHHHHHHHCCCCCCCEEEEEHHH
YLTGVDGWRQSYQQAQKIIEVTKTLYPSGGVWNYEDLSLEILAYDLLKNKPQSAKELTTT
HHHCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHEEEHHHCCCCCHHHHHHHH
YQRILTESDGIQLHQTLQTYIEENGKVSITSDKLFIHRNTLTYRLDKIHQITGKDPRNIN
HHHHHCCCCCCHHHHHHHHHHHCCCCEEEECCEEEEEECCHHHHHHHHHHHCCCCCCHHH
HLLELKMASLLYDLESN
HHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8202364; 9278503; 10762278 [H]