| Definition | Oceanobacillus iheyensis HTE831, complete genome. |
|---|---|
| Accession | NC_004193 |
| Length | 3,630,528 |
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The map label for this gene is 23100179
Identifier: 23100179
GI number: 23100179
Start: 2794158
End: 2795192
Strand: Reverse
Name: 23100179
Synonym: OB2724
Alternate gene names: NA
Gene position: 2795192-2794158 (Counterclockwise)
Preceding gene: 23100180
Following gene: 23100178
Centisome position: 76.99
GC content: 40.48
Gene sequence:
>1035_bases ATGAAGAGGCTTTTTTTATTCTTTTTAGTATTAGGTTTACCGTTGTTTCTGCTTATAGCTTGTGCAGATGGGGGAGATAG TGGCGATGGTGATAATGGTGGAGGCGATAGTATCACGTTGTATTCACCGGAGACACCTGATTTGACGAAGCAGCTTGCAC AAAAATATGAAGAAGTTCATGGCGGTAAGGTGAATGTGCATTATGCAGGAACGAATGTATTGGTGAATCAAATGATGGCG GAGAAGGGTAATCCGCAAGCGGACGTTTGGTATGGAGGTGGAGGGATCCTTCCATTCGAATCTGCAGTAGATAAAGAAAT TATTACTTCTTTTATTCCGGAAAGTGCTGAAGACTGGGAAGTTATTGAAAACGGTATCAAAATGAAGCATCAGGATGGGT ATTATACAGGGGTAGAATTATTCGTACTGGGATTTTCATATAATGCCGACCTTGTTTCCGAAGAAGAAGCTCCTAAGACT TGGGAAGATTTGTTGGATCCGAAATGGGAAGGAAAGATTCAATTTCCTAATCCAGCAGCATCTGGTACATCCACACTGAT GGTGCTTAGTTATATGATGCAATATGGTGAAGAAGAAGGATGGGAATATTTTCAAAAACTAAAGGATCAAGCAAATTCAA TTCCGGATTCTGGTTCTGCGCCTACAAAAGCTGTAGCGATGGGAGAAGCGCATGTTGCGGTTGGGTTTGATTTTATGGCA TATGAACACCAAGCGAATGGAGAGACTGTTGACTTTATTGTTCCAGATAAAACGCCAATACTGTCTAATCCAATGACACT AGTAAAAGATGGACCAAATCCTGAAGGCGGGCAGAAATTTATGGAGTTTATGCTGAGTGAGGATGCACAGCAAATTCTTG CGGACTGGTATCATATTCCGATTAATCCAGACATCGAATCGAAGACACCTTTGTCCGTTGATAATATTAGTAATCATGCG GTAGAACTTGATATCGACTGGGTGAATGAAAATTATGATCGAATACGAAATGAATGGAATAGCAAAATTAAGTAA
Upstream 100 bases:
>100_bases TGACGAGAGAAGATTAAATTTTCCCCTTATATTTTAGGGATTATTTGGTCTTTTCTCTTTTTTTATGAGATATAAATATA GCAAGAGGGGGTTGTCTTAT
Downstream 100 bases:
>100_bases AGGATGATCAATCATGGGGGCAGTTTTTCTAGAGAATGTGCGAAAGGATTTTGGTAAAGTAACGGTACTTAAAAATATAA ATTTGGATATTAAAGAGGGT
Product: AfuA protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 344; Mature: 344
Protein sequence:
>344_residues MKRLFLFFLVLGLPLFLLIACADGGDSGDGDNGGGDSITLYSPETPDLTKQLAQKYEEVHGGKVNVHYAGTNVLVNQMMA EKGNPQADVWYGGGGILPFESAVDKEIITSFIPESAEDWEVIENGIKMKHQDGYYTGVELFVLGFSYNADLVSEEEAPKT WEDLLDPKWEGKIQFPNPAASGTSTLMVLSYMMQYGEEEGWEYFQKLKDQANSIPDSGSAPTKAVAMGEAHVAVGFDFMA YEHQANGETVDFIVPDKTPILSNPMTLVKDGPNPEGGQKFMEFMLSEDAQQILADWYHIPINPDIESKTPLSVDNISNHA VELDIDWVNENYDRIRNEWNSKIK
Sequences:
>Translated_344_residues MKRLFLFFLVLGLPLFLLIACADGGDSGDGDNGGGDSITLYSPETPDLTKQLAQKYEEVHGGKVNVHYAGTNVLVNQMMA EKGNPQADVWYGGGGILPFESAVDKEIITSFIPESAEDWEVIENGIKMKHQDGYYTGVELFVLGFSYNADLVSEEEAPKT WEDLLDPKWEGKIQFPNPAASGTSTLMVLSYMMQYGEEEGWEYFQKLKDQANSIPDSGSAPTKAVAMGEAHVAVGFDFMA YEHQANGETVDFIVPDKTPILSNPMTLVKDGPNPEGGQKFMEFMLSEDAQQILADWYHIPINPDIESKTPLSVDNISNHA VELDIDWVNENYDRIRNEWNSKIK >Mature_344_residues MKRLFLFFLVLGLPLFLLIACADGGDSGDGDNGGGDSITLYSPETPDLTKQLAQKYEEVHGGKVNVHYAGTNVLVNQMMA EKGNPQADVWYGGGGILPFESAVDKEIITSFIPESAEDWEVIENGIKMKHQDGYYTGVELFVLGFSYNADLVSEEEAPKT WEDLLDPKWEGKIQFPNPAASGTSTLMVLSYMMQYGEEEGWEYFQKLKDQANSIPDSGSAPTKAVAMGEAHVAVGFDFMA YEHQANGETVDFIVPDKTPILSNPMTLVKDGPNPEGGQKFMEFMLSEDAQQILADWYHIPINPDIESKTPLSVDNISNHA VELDIDWVNENYDRIRNEWNSKIK
Specific function: Unknown
COG id: COG1840
COG function: function code P; ABC-type Fe3+ transport system, periplasmic component
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR006059 [H]
Pfam domain/function: PF01547 SBP_bac_1 [H]
EC number: NA
Molecular weight: Translated: 38208; Mature: 38208
Theoretical pI: Translated: 4.08; Mature: 4.08
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 3.5 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 3.5 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKRLFLFFLVLGLPLFLLIACADGGDSGDGDNGGGDSITLYSPETPDLTKQLAQKYEEVH CHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEECCCCCHHHHHHHHHHHHHC GGKVNVHYAGTNVLVNQMMAEKGNPQADVWYGGGGILPFESAVDKEIITSFIPESAEDWE CCEEEEEECCHHHHHHHHHHHCCCCCCEEEECCCCCCCCHHHHHHHHHHHHCCCCCCHHH VIENGIKMKHQDGYYTGVELFVLGFSYNADLVSEEEAPKTWEDLLDPKWEGKIQFPNPAA HHHHCCCEEECCCCEEEEEEEEEEECCCCCCCCCCCCCCHHHHHCCCCCCCEEECCCCCC SGTSTLMVLSYMMQYGEEEGWEYFQKLKDQANSIPDSGSAPTKAVAMGEAHVAVGFDFMA CCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCCCCCEEEECCCEEEECEEEEE YEHQANGETVDFIVPDKTPILSNPMTLVKDGPNPEGGQKFMEFMLSEDAQQILADWYHIP EEECCCCCEEEEECCCCCCCCCCCCEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHEECC INPDIESKTPLSVDNISNHAVELDIDWVNENYDRIRNEWNSKIK CCCCCCCCCCCCCCCCCCCEEEEEEEECCCCHHHHHHHHCCCCC >Mature Secondary Structure MKRLFLFFLVLGLPLFLLIACADGGDSGDGDNGGGDSITLYSPETPDLTKQLAQKYEEVH CHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEECCCCCHHHHHHHHHHHHHC GGKVNVHYAGTNVLVNQMMAEKGNPQADVWYGGGGILPFESAVDKEIITSFIPESAEDWE CCEEEEEECCHHHHHHHHHHHCCCCCCEEEECCCCCCCCHHHHHHHHHHHHCCCCCCHHH VIENGIKMKHQDGYYTGVELFVLGFSYNADLVSEEEAPKTWEDLLDPKWEGKIQFPNPAA HHHHCCCEEECCCCEEEEEEEEEEECCCCCCCCCCCCCCHHHHHCCCCCCCEEECCCCCC SGTSTLMVLSYMMQYGEEEGWEYFQKLKDQANSIPDSGSAPTKAVAMGEAHVAVGFDFMA CCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCCCCCEEEECCCEEEECEEEEE YEHQANGETVDFIVPDKTPILSNPMTLVKDGPNPEGGQKFMEFMLSEDAQQILADWYHIP EEECCCCCEEEEECCCCCCCCCCCCEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHEECC INPDIESKTPLSVDNISNHAVELDIDWVNENYDRIRNEWNSKIK CCCCCCCCCCCCCCCCCCCEEEEEEEECCCCHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 7542800; 10675023 [H]