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The map label for this gene is ygcP [H]

Identifier: 23100175

GI number: 23100175

Start: 2789957

End: 2790523

Strand: Direct

Name: ygcP [H]

Synonym: OB2720

Alternate gene names: 23100175

Gene position: 2789957-2790523 (Clockwise)

Preceding gene: 23100174

Following gene: 23100183

Centisome position: 76.85

GC content: 35.8

Gene sequence:

>567_bases
TTGGCTTATATCGTGGATATTGTTCAGTCGCAAGTCATTGCCTCTGTGAAGAAGGAACAAGACCTTCAAAAAGCGGTTAC
CTCAAACGCAAACGTTATATTTTTATTAACTGGAGATTTACTCTCCACGAAGAAATATATTGATAGATTAAAAGAAGCAA
ATAAATCGACCTTTATTCACCTCGACTTTATCGATGGGTTAACCAATTCGAGAAATGCTATCCAATATATCGCTAGAGAA
TGGAAACCTCTTGGTATAGTCACAACAAAAAGTAATCTGATTAAATATGCGAAGGAAGAAAATCTAGCGACCATACAACG
TATTTTTGTAATAGATAAAAATGCTTTAGCAAAAGGAGTAGAAATCGCAAATTCTGTTCGTCCTGATGCCATTGAAATAC
TACCAGGATTAATGCCGAAAATAATTGATCAAATTACAAAACAAACCCACCTGCCAGTAATTGCAGGTGGATTGATTAGT
GATAAACAAGAAATCATGAATGGACTAAAAGCCGGGGCACTTGCTATTTCTTCCGGGGATCCTTCCCTTTGGAATTTAGA
TTTATAA

Upstream 100 bases:

>100_bases
TCTTACTTTATACAGCTTACTACAGAATAATACTTGTCCTTGTAGAATAATATGGTATAGATAACGAGATGAATTTTATA
TTGTAGAAAGGATGGATAGA

Downstream 100 bases:

>100_bases
TTGTGTCTATTATATCTCGAACACTATCAACGACAAATTCAGGATGGTATTGTGATTGGTTTATCATTTTTTTCGTTGTG
ATGCCTGTAAGTACTAATAC

Product: transcriptional antiterminator of glycerol uptake operon

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 188; Mature: 187

Protein sequence:

>188_residues
MAYIVDIVQSQVIASVKKEQDLQKAVTSNANVIFLLTGDLLSTKKYIDRLKEANKSTFIHLDFIDGLTNSRNAIQYIARE
WKPLGIVTTKSNLIKYAKEENLATIQRIFVIDKNALAKGVEIANSVRPDAIEILPGLMPKIIDQITKQTHLPVIAGGLIS
DKQEIMNGLKAGALAISSGDPSLWNLDL

Sequences:

>Translated_188_residues
MAYIVDIVQSQVIASVKKEQDLQKAVTSNANVIFLLTGDLLSTKKYIDRLKEANKSTFIHLDFIDGLTNSRNAIQYIARE
WKPLGIVTTKSNLIKYAKEENLATIQRIFVIDKNALAKGVEIANSVRPDAIEILPGLMPKIIDQITKQTHLPVIAGGLIS
DKQEIMNGLKAGALAISSGDPSLWNLDL
>Mature_187_residues
AYIVDIVQSQVIASVKKEQDLQKAVTSNANVIFLLTGDLLSTKKYIDRLKEANKSTFIHLDFIDGLTNSRNAIQYIAREW
KPLGIVTTKSNLIKYAKEENLATIQRIFVIDKNALAKGVEIANSVRPDAIEILPGLMPKIIDQITKQTHLPVIAGGLISD
KQEIMNGLKAGALAISSGDPSLWNLDL

Specific function: Unknown

COG id: COG1954

COG function: function code K; Glycerol-3-phosphate responsive antiterminator (mRNA-binding)

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: To B.subtilis glpP [H]

Homologues:

Organism=Escherichia coli, GI1789127, Length=178, Percent_Identity=34.2696629213483, Blast_Score=129, Evalue=1e-31,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006699 [H]

Pfam domain/function: PF04309 G3P_antiterm [H]

EC number: NA

Molecular weight: Translated: 20682; Mature: 20551

Theoretical pI: Translated: 9.34; Mature: 9.34

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
1.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
1.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAYIVDIVQSQVIASVKKEQDLQKAVTSNANVIFLLTGDLLSTKKYIDRLKEANKSTFIH
CHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHCCCCEEEE
LDFIDGLTNSRNAIQYIAREWKPLGIVTTKSNLIKYAKEENLATIQRIFVIDKNALAKGV
EEECCCCCCCHHHHHHHHHCCCCCEEEECHHHHHHHHHHCCHHHHHHHHEECCHHHHHHH
EIANSVRPDAIEILPGLMPKIIDQITKQTHLPVIAGGLISDKQEIMNGLKAGALAISSGD
HHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCEEECCHHCCHHHHHHHHHHCEEEEECCC
PSLWNLDL
CCEEECCC
>Mature Secondary Structure 
AYIVDIVQSQVIASVKKEQDLQKAVTSNANVIFLLTGDLLSTKKYIDRLKEANKSTFIH
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHCCCCEEEE
LDFIDGLTNSRNAIQYIAREWKPLGIVTTKSNLIKYAKEENLATIQRIFVIDKNALAKGV
EEECCCCCCCHHHHHHHHHCCCCCEEEECHHHHHHHHHHCCHHHHHHHHEECCHHHHHHH
EIANSVRPDAIEILPGLMPKIIDQITKQTHLPVIAGGLISDKQEIMNGLKAGALAISSGD
HHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCEEECCHHCCHHHHHHHHHHCEEEEECCC
PSLWNLDL
CCEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9278503 [H]