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The map label for this gene is pepF [H]

Identifier: 23100050

GI number: 23100050

Start: 2654170

End: 2655867

Strand: Direct

Name: pepF [H]

Synonym: OB2595

Alternate gene names: 23100050

Gene position: 2654170-2655867 (Clockwise)

Preceding gene: 23100048

Following gene: 23100053

Centisome position: 73.11

GC content: 34.86

Gene sequence:

>1698_bases
ATGCTAGCATTTGAAGATTACACCTATGAACGACCAGATATCGAAAAGAGTAAAGAAAAATTTCAACAATTAGTGGACGT
TTTTAAAAGTGCACCTGATGTGAAACATGCGATAAAAGCGATTGATGAAATTAATCAATTAAGAAATAACCTTTATACAA
TGTCTAATCTCGTATTTATTCGAGCTTCTATTGACACAAGGGATGAATATTATCAACAAGAAAGGGACCACTTTGACCTA
ATTGAACCAGAAATACAAGAAATGGTGACAAGCTTCTATAAAGCATTATTCGAATCACCGCATGAAGAAGATTTACGGAA
AGAATATGGTTCACAGCTTTTTGATTTAGCAGCTTGTGAGGTAAAAGCATTCTCAAAAGAGATTATACCCTTACTGCAAC
AGGAGAACAAACTTACTTCGGAGTACTCTAAATTAATTGCTTCTGCAGATATCGAATTCAAAGGCAAAAAATATACTTTG
GCTCAATTAGGGCCTTTCGCACAGCATAAAGATAGAAATGTACGTAAAGACGCAATGAATGCAGCGCAGGGTTTCTATAT
AGAAAATGAAGAAACATTAGATCGTATTTACGACGATTTAGTTAAAGTCCGCCATGAAATCGCAGAAAAGCTTGGATATG
ACAATTTTATTGAAGTTGGCTATTTACGTATGCAACGAGTGGATTATGATGCAACCATGGTAGAAGTGTTCCGACAACAA
GTACGTGATGTTATAGTCCCAATAGCAACGAATTTGTATAAAAAACATGCAAATCGAATTGGTGTCGATAAACTAAAGGC
ATATGATGAAAGCTTTGTGTTCCCTTCCGGCAATGCTACGCCTAAGGGATCGCCAGAATGGATTATTGAAAACGGAAAGA
AAATGTATCAAGAGTTATCTAATGAGACTGGTGAATTTTTTCAGTTTATGTTAGATCATGAACTTATGGATTTAGAAGCA
AAGAAAGGAAAAGAAGCTGGAGGATATTGTACGTTTATCGAGGACTATTCTTCCCCATTTATCTTTGCTAATTTCAATGG
AACATCAGATGATATTGATGTTTTAACACACGAAGCTGGTCACGCTTTCCAAGTTTATAGCAGTAGAAATTACAGTGTTC
CAGAATACTATTTCCCAACTAGTGAATCAGCTGAAATACATTCAATGAGCATGGAGTTCTTTACCTATCCTTGGATGAAA
GAATTCTTTGGAGATGAGGTCGAAAAGTATAAATACGCTCATTTATCTGATGCATTACAATTTATTCCATATGGTGTTGC
CGTAGATGAATTTCAACATTTAGTTTATAAAAATCCTGAATGGACACCTAAGGAAAGAAAACAAGCGTGGAAAAAACTTG
AAGAAACTTACTTACCACATCGCGATTATGATGGCATTCCAAATTTAGAAGCTGGTGGGTTCTGGCAAAAACAAGGTCAT
ATCTATGAAGATCCTTTTTATTATATTGATTATACATTAGCACAGATTTGCGCATTCCAATTTTGGAAGAAAGCGCAGGA
AGATAATGAATCTGCTTGGAGCGATTATGTACATTTATGCAAACTAGGTGGATCTCAGCCATTTCTCCAACTTTTAAAAG
AAGGTAATTTAAAATCTCCTTTCGAAAAAGGTACAGTTGCTTCTGTAGTAAAAATAATTGAAGATTACTTACAAGCAATT
GATGATAACAGTTTATAA

Upstream 100 bases:

>100_bases
GACAAACAATTTATCTAATAAAATTTATTATATCCATAACAAGGAATCTCATTAACAAATGTCGAAAAGAGTTACTATAA
AGAAAAAAGGGGGACATATC

Downstream 100 bases:

>100_bases
AGGAATAATTGCATCCTAAAAAGCTACAAAAGAAGTGTTGAGACAAACGTTCGTCTCAACACTTCTATTTTTAGCTAGGA
TCTGGGTGTTCTTCTTCACT

Product: oligoendopeptidase F

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 565; Mature: 565

Protein sequence:

>565_residues
MLAFEDYTYERPDIEKSKEKFQQLVDVFKSAPDVKHAIKAIDEINQLRNNLYTMSNLVFIRASIDTRDEYYQQERDHFDL
IEPEIQEMVTSFYKALFESPHEEDLRKEYGSQLFDLAACEVKAFSKEIIPLLQQENKLTSEYSKLIASADIEFKGKKYTL
AQLGPFAQHKDRNVRKDAMNAAQGFYIENEETLDRIYDDLVKVRHEIAEKLGYDNFIEVGYLRMQRVDYDATMVEVFRQQ
VRDVIVPIATNLYKKHANRIGVDKLKAYDESFVFPSGNATPKGSPEWIIENGKKMYQELSNETGEFFQFMLDHELMDLEA
KKGKEAGGYCTFIEDYSSPFIFANFNGTSDDIDVLTHEAGHAFQVYSSRNYSVPEYYFPTSESAEIHSMSMEFFTYPWMK
EFFGDEVEKYKYAHLSDALQFIPYGVAVDEFQHLVYKNPEWTPKERKQAWKKLEETYLPHRDYDGIPNLEAGGFWQKQGH
IYEDPFYYIDYTLAQICAFQFWKKAQEDNESAWSDYVHLCKLGGSQPFLQLLKEGNLKSPFEKGTVASVVKIIEDYLQAI
DDNSL

Sequences:

>Translated_565_residues
MLAFEDYTYERPDIEKSKEKFQQLVDVFKSAPDVKHAIKAIDEINQLRNNLYTMSNLVFIRASIDTRDEYYQQERDHFDL
IEPEIQEMVTSFYKALFESPHEEDLRKEYGSQLFDLAACEVKAFSKEIIPLLQQENKLTSEYSKLIASADIEFKGKKYTL
AQLGPFAQHKDRNVRKDAMNAAQGFYIENEETLDRIYDDLVKVRHEIAEKLGYDNFIEVGYLRMQRVDYDATMVEVFRQQ
VRDVIVPIATNLYKKHANRIGVDKLKAYDESFVFPSGNATPKGSPEWIIENGKKMYQELSNETGEFFQFMLDHELMDLEA
KKGKEAGGYCTFIEDYSSPFIFANFNGTSDDIDVLTHEAGHAFQVYSSRNYSVPEYYFPTSESAEIHSMSMEFFTYPWMK
EFFGDEVEKYKYAHLSDALQFIPYGVAVDEFQHLVYKNPEWTPKERKQAWKKLEETYLPHRDYDGIPNLEAGGFWQKQGH
IYEDPFYYIDYTLAQICAFQFWKKAQEDNESAWSDYVHLCKLGGSQPFLQLLKEGNLKSPFEKGTVASVVKIIEDYLQAI
DDNSL
>Mature_565_residues
MLAFEDYTYERPDIEKSKEKFQQLVDVFKSAPDVKHAIKAIDEINQLRNNLYTMSNLVFIRASIDTRDEYYQQERDHFDL
IEPEIQEMVTSFYKALFESPHEEDLRKEYGSQLFDLAACEVKAFSKEIIPLLQQENKLTSEYSKLIASADIEFKGKKYTL
AQLGPFAQHKDRNVRKDAMNAAQGFYIENEETLDRIYDDLVKVRHEIAEKLGYDNFIEVGYLRMQRVDYDATMVEVFRQQ
VRDVIVPIATNLYKKHANRIGVDKLKAYDESFVFPSGNATPKGSPEWIIENGKKMYQELSNETGEFFQFMLDHELMDLEA
KKGKEAGGYCTFIEDYSSPFIFANFNGTSDDIDVLTHEAGHAFQVYSSRNYSVPEYYFPTSESAEIHSMSMEFFTYPWMK
EFFGDEVEKYKYAHLSDALQFIPYGVAVDEFQHLVYKNPEWTPKERKQAWKKLEETYLPHRDYDGIPNLEAGGFWQKQGH
IYEDPFYYIDYTLAQICAFQFWKKAQEDNESAWSDYVHLCKLGGSQPFLQLLKEGNLKSPFEKGTVASVVKIIEDYLQAI
DDNSL

Specific function: Unknown

COG id: COG1164

COG function: function code E; Oligoendopeptidase F

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the peptidase M3B family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001567
- InterPro:   IPR004438
- InterPro:   IPR013647 [H]

Pfam domain/function: PF01432 Peptidase_M3; PF08439 Peptidase_M3_N [H]

EC number: NA

Molecular weight: Translated: 66003; Mature: 66003

Theoretical pI: Translated: 4.63; Mature: 4.63

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLAFEDYTYERPDIEKSKEKFQQLVDVFKSAPDVKHAIKAIDEINQLRNNLYTMSNLVFI
CCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCEEEE
RASIDTRDEYYQQERDHFDLIEPEIQEMVTSFYKALFESPHEEDLRKEYGSQLFDLAACE
EECCCCHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHH
VKAFSKEIIPLLQQENKLTSEYSKLIASADIEFKGKKYTLAQLGPFAQHKDRNVRKDAMN
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEECCCEEEHHHHCCHHHHCCCCHHHHHHH
AAQGFYIENEETLDRIYDDLVKVRHEIAEKLGYDNFIEVGYLRMQRVDYDATMVEVFRQQ
HHCCCEECCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCHHHHHHHHHHH
VRDVIVPIATNLYKKHANRIGVDKLKAYDESFVFPSGNATPKGSPEWIIENGKKMYQELS
HHHHHHHHHHHHHHHHHHHCCHHHHHHHCCCEECCCCCCCCCCCCCHHHHHHHHHHHHHH
NETGEFFQFMLDHELMDLEAKKGKEAGGYCTFIEDYSSPFIFANFNGTSDDIDVLTHEAG
CCHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCEEEEECCCCCCCHHHHCCCCC
HAFQVYSSRNYSVPEYYFPTSESAEIHSMSMEFFTYPWMKEFFGDEVEKYKYAHLSDALQ
CEEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHHCHHHHHHHCCHHHHHHHHHHHHHHH
FIPYGVAVDEFQHLVYKNPEWTPKERKQAWKKLEETYLPHRDYDGIPNLEAGGFWQKQGH
HHCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEECCCCC
IYEDPFYYIDYTLAQICAFQFWKKAQEDNESAWSDYVHLCKLGGSQPFLQLLKEGNLKSP
EECCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCHHHHHHHHCCCCCCC
FEKGTVASVVKIIEDYLQAIDDNSL
CCCCHHHHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure
MLAFEDYTYERPDIEKSKEKFQQLVDVFKSAPDVKHAIKAIDEINQLRNNLYTMSNLVFI
CCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCEEEE
RASIDTRDEYYQQERDHFDLIEPEIQEMVTSFYKALFESPHEEDLRKEYGSQLFDLAACE
EECCCCHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHH
VKAFSKEIIPLLQQENKLTSEYSKLIASADIEFKGKKYTLAQLGPFAQHKDRNVRKDAMN
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEECCCEEEHHHHCCHHHHCCCCHHHHHHH
AAQGFYIENEETLDRIYDDLVKVRHEIAEKLGYDNFIEVGYLRMQRVDYDATMVEVFRQQ
HHCCCEECCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCHHHHHHHHHHH
VRDVIVPIATNLYKKHANRIGVDKLKAYDESFVFPSGNATPKGSPEWIIENGKKMYQELS
HHHHHHHHHHHHHHHHHHHCCHHHHHHHCCCEECCCCCCCCCCCCCHHHHHHHHHHHHHH
NETGEFFQFMLDHELMDLEAKKGKEAGGYCTFIEDYSSPFIFANFNGTSDDIDVLTHEAG
CCHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCEEEEECCCCCCCHHHHCCCCC
HAFQVYSSRNYSVPEYYFPTSESAEIHSMSMEFFTYPWMKEFFGDEVEKYKYAHLSDALQ
CEEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHHCHHHHHHHCCHHHHHHHHHHHHHHH
FIPYGVAVDEFQHLVYKNPEWTPKERKQAWKKLEETYLPHRDYDGIPNLEAGGFWQKQGH
HHCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEECCCCC
IYEDPFYYIDYTLAQICAFQFWKKAQEDNESAWSDYVHLCKLGGSQPFLQLLKEGNLKSP
EECCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCHHHHHHHHCCCCCCC
FEKGTVASVVKIIEDYLQAIDDNSL
CCCCHHHHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9403685 [H]