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The map label for this gene is atoE [H]

Identifier: 23100004

GI number: 23100004

Start: 2603579

End: 2604904

Strand: Direct

Name: atoE [H]

Synonym: OB2549

Alternate gene names: 23100004

Gene position: 2603579-2604904 (Clockwise)

Preceding gene: 23100003

Following gene: 23100016

Centisome position: 71.71

GC content: 35.07

Gene sequence:

>1326_bases
TTGAAAACGGTAACTTCTTTTTTTGACAGAATGGTTCAACGGTATCTGCCAGATGCTTTTTTATTCGCCATCATCTTAAC
CATTATCGTATTTTTTATTGGGTTGTTATTTCCTGATAACGGACCACTTGAAATGGTTCAATTTTGGGGTAATGGATTTT
GGGGATTATTAGAATTTGCAATGCAGATGTCACTTGTCGTAATTACTGGATACATCCTAGCAAGCACCAATGTGGTCAAA
AGATTTTTATCTAGGCTGAGTAAACTAGCAAACACACCTGCTCAAGCAATTATTTTAGTTACTTTTATTGCATTAATCGC
ATGTTTTATCAATTATGGTTTTGGACTCGTAGTAGGGGCTTTATTTGCCACTCATGTTGCAAAACAAGTTCCTTCCGTTG
ATTATCGGTTATTAATCGCCAGCGCTTATAGTGGTTTTCTAATTTGGCATGGTGGATTTTCCGGATCTGTACCATTAACT
ATCGCTACAGCTGGTCATTTTCTGGAAGGACAAGTAGGTATCATTCCTATTACAGAAACATTATTTAGTCCTTATAATTT
GTTTATTGTTATCACTTTATTAGTGGCACTACCATTATTTAATCGCTACCTTTTAAATGGAATTGCAGATAATAATACTT
ACTTTGCAGAAAAAATTCAACAAACAGAGCAAAAACCAAATGTTGATGCTAATAGTATACCAACAACACCTGCTGAAAAA
TTAGAAAATAGCCCAATCGTCTCGATGATAATTGGAATTTTAGGCTTAAGTTTTATCGTGTATTATTTTGTAACTAACGG
ATTTAATTTAAATATTAATATTGTTAATTTTATATTTTTGTTTCTGGGAATAATTTTACACCGGACACCGAGACAATTTC
TTGATAATGTCAGTCAAGGAGTTAAAAATGCTGGCGCGATCATTATCCAATTTCCATTTTATGCCGGAATTATGGGAATG
ATGGTTGATTCAGGTATTTCAGAGGCATTGTCTTTGTGGTTTGTAAATATTTCTACTGAGTATACACTCCCATTTCTATC
TTTTATTAGTGCGGGTATCGTAAATTTCTTCATTCCATCTGGTGGTGGTCAGTGGGCAATACAGGGTCCAATTATGATTG
AATCTGCACTTGAATTAGGGGCAGACACAGCTAAAACAGCCATGGGGATTGCATGGGGAGATGCATGGACAAATATGATT
CAGCCTTTTTGGGCACTTCCAGCACTTGCTATTGCAGGCTTAAAAGTGAGAGATATTATGGGATTCTGTGTCATGATTTT
AATATTTAGCTTTATCCCCATATCAATTGGACTGTTATTCTTTTAA

Upstream 100 bases:

>100_bases
TTCTTTCTCTATTTATTTGCTATTCGTATTTATTAGAATTATAGTATGGTATACGTGTGTATAAATTGTAATATGGCATT
TTTAAAGGGGGAGAAATAAA

Downstream 100 bases:

>100_bases
AAATATTAAAAAAGGCTTTCTTCTATGAAGAAGGCCTATAAAAGAATTACCCAACATGTCGAGTGTTTATAGTCTCCTTC
GCCTTATCTATTACTGAGAA

Product: short-chain fatty acids transporter

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 441; Mature: 441

Protein sequence:

>441_residues
MKTVTSFFDRMVQRYLPDAFLFAIILTIIVFFIGLLFPDNGPLEMVQFWGNGFWGLLEFAMQMSLVVITGYILASTNVVK
RFLSRLSKLANTPAQAIILVTFIALIACFINYGFGLVVGALFATHVAKQVPSVDYRLLIASAYSGFLIWHGGFSGSVPLT
IATAGHFLEGQVGIIPITETLFSPYNLFIVITLLVALPLFNRYLLNGIADNNTYFAEKIQQTEQKPNVDANSIPTTPAEK
LENSPIVSMIIGILGLSFIVYYFVTNGFNLNINIVNFIFLFLGIILHRTPRQFLDNVSQGVKNAGAIIIQFPFYAGIMGM
MVDSGISEALSLWFVNISTEYTLPFLSFISAGIVNFFIPSGGGQWAIQGPIMIESALELGADTAKTAMGIAWGDAWTNMI
QPFWALPALAIAGLKVRDIMGFCVMILIFSFIPISIGLLFF

Sequences:

>Translated_441_residues
MKTVTSFFDRMVQRYLPDAFLFAIILTIIVFFIGLLFPDNGPLEMVQFWGNGFWGLLEFAMQMSLVVITGYILASTNVVK
RFLSRLSKLANTPAQAIILVTFIALIACFINYGFGLVVGALFATHVAKQVPSVDYRLLIASAYSGFLIWHGGFSGSVPLT
IATAGHFLEGQVGIIPITETLFSPYNLFIVITLLVALPLFNRYLLNGIADNNTYFAEKIQQTEQKPNVDANSIPTTPAEK
LENSPIVSMIIGILGLSFIVYYFVTNGFNLNINIVNFIFLFLGIILHRTPRQFLDNVSQGVKNAGAIIIQFPFYAGIMGM
MVDSGISEALSLWFVNISTEYTLPFLSFISAGIVNFFIPSGGGQWAIQGPIMIESALELGADTAKTAMGIAWGDAWTNMI
QPFWALPALAIAGLKVRDIMGFCVMILIFSFIPISIGLLFF
>Mature_441_residues
MKTVTSFFDRMVQRYLPDAFLFAIILTIIVFFIGLLFPDNGPLEMVQFWGNGFWGLLEFAMQMSLVVITGYILASTNVVK
RFLSRLSKLANTPAQAIILVTFIALIACFINYGFGLVVGALFATHVAKQVPSVDYRLLIASAYSGFLIWHGGFSGSVPLT
IATAGHFLEGQVGIIPITETLFSPYNLFIVITLLVALPLFNRYLLNGIADNNTYFAEKIQQTEQKPNVDANSIPTTPAEK
LENSPIVSMIIGILGLSFIVYYFVTNGFNLNINIVNFIFLFLGIILHRTPRQFLDNVSQGVKNAGAIIIQFPFYAGIMGM
MVDSGISEALSLWFVNISTEYTLPFLSFISAGIVNFFIPSGGGQWAIQGPIMIESALELGADTAKTAMGIAWGDAWTNMI
QPFWALPALAIAGLKVRDIMGFCVMILIFSFIPISIGLLFF

Specific function: Responsible for the intake of short-chain fatty acids [H]

COG id: COG2031

COG function: function code I; Short chain fatty acids transporter

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1788553, Length=442, Percent_Identity=46.8325791855204, Blast_Score=424, Evalue=1e-120,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006161
- InterPro:   IPR006160 [H]

Pfam domain/function: PF02667 SCFA_trans [H]

EC number: NA

Molecular weight: Translated: 48502; Mature: 48502

Theoretical pI: Translated: 5.67; Mature: 5.67

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKTVTSFFDRMVQRYLPDAFLFAIILTIIVFFIGLLFPDNGPLEMVQFWGNGFWGLLEFA
CCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHCCCHHHHHHHH
MQMSLVVITGYILASTNVVKRFLSRLSKLANTPAQAIILVTFIALIACFINYGFGLVVGA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCHHHHHHH
LFATHVAKQVPSVDYRLLIASAYSGFLIWHGGFSGSVPLTIATAGHFLEGQVGIIPITET
HHHHHHHHHCCCCCHHHHEECCCCCEEEEECCCCCCCCEEEEECCCCCCCCEEEEECHHH
LFSPYNLFIVITLLVALPLFNRYLLNGIADNNTYFAEKIQQTEQKPNVDANSIPTTPAEK
HCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCHHH
LENSPIVSMIIGILGLSFIVYYFVTNGFNLNINIVNFIFLFLGIILHRTPRQFLDNVSQG
HCCCCHHHHHHHHHHHHHHHHHHHHCCCEEEEHHHHHHHHHHHHHHHCCHHHHHHHHHHH
VKNAGAIIIQFPFYAGIMGMMVDSGISEALSLWFVNISTEYTLPFLSFISAGIVNFFIPS
HHCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHEEEECCCHHHHHHHHHHHHHHHEEECC
GGGQWAIQGPIMIESALELGADTAKTAMGIAWGDAWTNMIQPFWALPALAIAGLKVRDIM
CCCCEEEECCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHH
GFCVMILIFSFIPISIGLLFF
HHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MKTVTSFFDRMVQRYLPDAFLFAIILTIIVFFIGLLFPDNGPLEMVQFWGNGFWGLLEFA
CCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHCCCHHHHHHHH
MQMSLVVITGYILASTNVVKRFLSRLSKLANTPAQAIILVTFIALIACFINYGFGLVVGA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCHHHHHHH
LFATHVAKQVPSVDYRLLIASAYSGFLIWHGGFSGSVPLTIATAGHFLEGQVGIIPITET
HHHHHHHHHCCCCCHHHHEECCCCCEEEEECCCCCCCCEEEEECCCCCCCCEEEEECHHH
LFSPYNLFIVITLLVALPLFNRYLLNGIADNNTYFAEKIQQTEQKPNVDANSIPTTPAEK
HCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCHHH
LENSPIVSMIIGILGLSFIVYYFVTNGFNLNINIVNFIFLFLGIILHRTPRQFLDNVSQG
HCCCCHHHHHHHHHHHHHHHHHHHHCCCEEEEHHHHHHHHHHHHHHHCCHHHHHHHHHHH
VKNAGAIIIQFPFYAGIMGMMVDSGISEALSLWFVNISTEYTLPFLSFISAGIVNFFIPS
HHCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHEEEECCCHHHHHHHHHHHHHHHEEECC
GGGQWAIQGPIMIESALELGADTAKTAMGIAWGDAWTNMIQPFWALPALAIAGLKVRDIM
CCCCEEEECCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHH
GFCVMILIFSFIPISIGLLFF
HHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9097040; 9278503 [H]