| Definition | Oceanobacillus iheyensis HTE831, complete genome. |
|---|---|
| Accession | NC_004193 |
| Length | 3,630,528 |
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The map label for this gene is zur [H]
Identifier: 23099853
GI number: 23099853
Start: 2450276
End: 2450689
Strand: Direct
Name: zur [H]
Synonym: OB2398
Alternate gene names: 23099853
Gene position: 2450276-2450689 (Clockwise)
Preceding gene: 23099852
Following gene: 23099854
Centisome position: 67.49
GC content: 31.4
Gene sequence:
>414_bases ATGAATCTTCAAGAAGCAATGATCGTTTTAAAAGATAAAGGTTATAAAGCAACTGGTAAACGAAAAGACATCTTAGAGTT TTTTGAAGATGTTGATGGTTATCGTTCTGCAAAAGATCTCATAACTCATTTAGAAAAAAGTTTTGATAGTGTAAGTTTTG ATACTATTTACCGCAATCTCCATTTATATCATTCTCTTGGTATATTGGAGTCAACAGACTTAAATGGTGAAAAACATTTC CGAATGAATTGTACGCATCACCACCACCATCATTTTATATGTAATGAATGTGGTAAAACAAAAGAGATTGAAATTTGCCC AATGGATTCCGCAGAAAAATCATTGACGAATTATGTCATTGAAGATCATAAATTTGAAATATATGGACTTTGCCCACTTT GTAAAGGTGCTTAA
Upstream 100 bases:
>100_bases ATATCCCTCCAGGTGGTACAATAGTAATGATAGCTATTATTATATTATTAGTAGCTATCGGAGTTAAAAAGCTTCAATCT AAGTAAACGGGGGCTATAAC
Downstream 100 bases:
>100_bases TTTGCTAAAATTCTGCATATAATATTTCCTATTCTTATATTTCCATGTATACTACGTGTAGATACTATTTTTGGGAGAAG TGAATAATGGATAAAAAGAA
Product: zinc-specific metalloregulatory protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 137; Mature: 137
Protein sequence:
>137_residues MNLQEAMIVLKDKGYKATGKRKDILEFFEDVDGYRSAKDLITHLEKSFDSVSFDTIYRNLHLYHSLGILESTDLNGEKHF RMNCTHHHHHHFICNECGKTKEIEICPMDSAEKSLTNYVIEDHKFEIYGLCPLCKGA
Sequences:
>Translated_137_residues MNLQEAMIVLKDKGYKATGKRKDILEFFEDVDGYRSAKDLITHLEKSFDSVSFDTIYRNLHLYHSLGILESTDLNGEKHF RMNCTHHHHHHFICNECGKTKEIEICPMDSAEKSLTNYVIEDHKFEIYGLCPLCKGA >Mature_137_residues MNLQEAMIVLKDKGYKATGKRKDILEFFEDVDGYRSAKDLITHLEKSFDSVSFDTIYRNLHLYHSLGILESTDLNGEKHF RMNCTHHHHHHFICNECGKTKEIEICPMDSAEKSLTNYVIEDHKFEIYGLCPLCKGA
Specific function: Required for the zinc-specific repression of two operons implicated in zinc uptake, yciC and ycdHIyceA. Also represses the expression of rpmE2, the gene for ribosomal protein L31B, which is expressed only after the end of exponential growth [H]
COG id: COG0735
COG function: function code P; Fe2+/Zn2+ uptake regulation proteins
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the Fur family [H]
Homologues:
None
Paralogues:
None
Copy number: 3432 Molecules/Cell In: Growth Phase, Glucose-minimal MOPS Media. [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002481 [H]
Pfam domain/function: PF01475 FUR [H]
EC number: NA
Molecular weight: Translated: 15893; Mature: 15893
Theoretical pI: Translated: 6.58; Mature: 6.58
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
4.4 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 7.3 %Cys+Met (Translated Protein) 4.4 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 7.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNLQEAMIVLKDKGYKATGKRKDILEFFEDVDGYRSAKDLITHLEKSFDSVSFDTIYRNL CCHHHEEEEEECCCCCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCHHHHHHHHH HLYHSLGILESTDLNGEKHFRMNCTHHHHHHFICNECGKTKEIEICPMDSAEKSLTNYVI HHHHHCCCEECCCCCCCCEEEECCCCCCCCCCHHHCCCCCCEEEECCCCCHHHHHHHHHH EDHKFEIYGLCPLCKGA CCCCEEEEEECCCCCCC >Mature Secondary Structure MNLQEAMIVLKDKGYKATGKRKDILEFFEDVDGYRSAKDLITHLEKSFDSVSFDTIYRNL CCHHHEEEEEECCCCCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCHHHHHHHHH HLYHSLGILESTDLNGEKHFRMNCTHHHHHHFICNECGKTKEIEICPMDSAEKSLTNYVI HHHHHCCCEECCCCCCCCEEEECCCCCCCCCCHHHCCCCCCEEEECCCCCHHHHHHHHHH EDHKFEIYGLCPLCKGA CCCCEEEEEECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: DNA [C]
Specific reaction: Protein + DNA = Protein-DNA [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8969508; 9384377; 9811636 [H]