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The map label for this gene is yrdA [H]

Identifier: 23099846

GI number: 23099846

Start: 2441073

End: 2441546

Strand: Reverse

Name: yrdA [H]

Synonym: OB2391

Alternate gene names: 23099846

Gene position: 2441546-2441073 (Counterclockwise)

Preceding gene: 23099848

Following gene: 23099844

Centisome position: 67.25

GC content: 39.45

Gene sequence:

>474_bases
ATGTATCGCACAGTAACTGATTTTTTGAGTGAATGGAATGATTCTGCAGATGGCACAGCCAATGTAATCAATAATTTAAC
CGATGATAAGCTTGATCAAGCAATCGTAGAAGGTCACAGCACACTTGGTTGGTTAGGTTGGCACTTGGTAAACAGTCCAG
CTTTTTTTGGGAAACTAGCTGGCCTAGATATTGATCTGTCACATGATCCAGATCGAGTTCCTACGAAAGCGCAAGATATA
GCAGAAGCGTATAATGACATGGCTCAAATTGTTAAAGAGCAAGTAGAACAACAACTTACTGATGAATCATTAAACGAAAA
AGTGGATAGTTTTGGAACACCTATCCCTCGTGGTGCAATACTAAGAAAGATGATTGATCATCAAACACATCATCGTGGTC
AAATGACTGTACTTTTAAGACAAGCTGGCTTATCTGTCCCTGGTGTTATGGGTCCAACAAAAGAAGATCAGTAA

Upstream 100 bases:

>100_bases
GATGTCGGGGGCGGGATGTCACTTAAAGTAGATGATTGGATATTAAAATACTAAATGTGGTAGCATACAGTTATGAAGAT
GAACGGGAGGGAATTTTTAT

Downstream 100 bases:

>100_bases
AGTTGTAATTTGATTTTCACTTATCATAATAATTAAAATATGGTATATTATAGTTAGAGAGTAATACGATAATGAAAAAG
TCATCTCATGCAAAAACATG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 157; Mature: 157

Protein sequence:

>157_residues
MYRTVTDFLSEWNDSADGTANVINNLTDDKLDQAIVEGHSTLGWLGWHLVNSPAFFGKLAGLDIDLSHDPDRVPTKAQDI
AEAYNDMAQIVKEQVEQQLTDESLNEKVDSFGTPIPRGAILRKMIDHQTHHRGQMTVLLRQAGLSVPGVMGPTKEDQ

Sequences:

>Translated_157_residues
MYRTVTDFLSEWNDSADGTANVINNLTDDKLDQAIVEGHSTLGWLGWHLVNSPAFFGKLAGLDIDLSHDPDRVPTKAQDI
AEAYNDMAQIVKEQVEQQLTDESLNEKVDSFGTPIPRGAILRKMIDHQTHHRGQMTVLLRQAGLSVPGVMGPTKEDQ
>Mature_157_residues
MYRTVTDFLSEWNDSADGTANVINNLTDDKLDQAIVEGHSTLGWLGWHLVNSPAFFGKLAGLDIDLSHDPDRVPTKAQDI
AEAYNDMAQIVKEQVEQQLTDESLNEKVDSFGTPIPRGAILRKMIDHQTHHRGQMTVLLRQAGLSVPGVMGPTKEDQ

Specific function: Unknown

COG id: COG2318

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the dinB family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007837 [H]

Pfam domain/function: PF05163 DinB [H]

EC number: NA

Molecular weight: Translated: 17408; Mature: 17408

Theoretical pI: Translated: 4.56; Mature: 4.56

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MYRTVTDFLSEWNDSADGTANVINNLTDDKLDQAIVEGHSTLGWLGWHLVNSPAFFGKLA
CCCHHHHHHHHHCCCCCCHHHHHHCCCHHHHHHHHHHCCCHHHHHHHHHHCCCHHHHHHH
GLDIDLSHDPDRVPTKAQDIAEAYNDMAQIVKEQVEQQLTDESLNEKVDSFGTPIPRGAI
CCEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHH
LRKMIDHQTHHRGQMTVLLRQAGLSVPGVMGPTKEDQ
HHHHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCCC
>Mature Secondary Structure
MYRTVTDFLSEWNDSADGTANVINNLTDDKLDQAIVEGHSTLGWLGWHLVNSPAFFGKLA
CCCHHHHHHHHHCCCCCCHHHHHHCCCHHHHHHHHHHCCCHHHHHHHHHHCCCHHHHHHH
GLDIDLSHDPDRVPTKAQDIAEAYNDMAQIVKEQVEQQLTDESLNEKVDSFGTPIPRGAI
CCEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHH
LRKMIDHQTHHRGQMTVLLRQAGLSVPGVMGPTKEDQ
HHHHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9308178; 9384377 [H]