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The map label for this gene is yusF [H]

Identifier: 23099841

GI number: 23099841

Start: 2437724

End: 2438173

Strand: Reverse

Name: yusF [H]

Synonym: OB2386

Alternate gene names: 23099841

Gene position: 2438173-2437724 (Counterclockwise)

Preceding gene: 23099843

Following gene: 23099840

Centisome position: 67.16

GC content: 34.22

Gene sequence:

>450_bases
TTGATGGCTCTTTCAAATGGAAGTCATCCTTATAATACAAATCAAATCGTGATTAATAAGCATGTTTCTTGCTTGCATAA
GGAGTGCTATGCGATGATGATAAATGAATCTAATAAAGTAATTATTGTAGAAGGTTTGTCAGATAAGCGGCAAATTGAAA
AAATTATTGATGATAAGGTTATAATCGTCTGTACAAATGGAACTTTAGGCGTTGAAAAACTCGATGAACTACTAGAAACG
TATGAATTAGATGAGAAGGATGTCTATATCTTAGTAGACGAGGATCCTTCTGGTATGAAATTAAGAAAACAATTAGCTAG
AGAGTTACCTCATGCAGAGCATATTTATGTGAGCAGTGAGTATCGAGAAGTTGCAGCTACACCTATGAAGGTTTTAGCAA
ATGCATTAATTGGAGCGCGGTTTACGGTTAATCCGACTTATTTACTTTAA

Upstream 100 bases:

>100_bases
TATCAAAAGAGAGAGAACGGTGCATTTTTTACATCTTTAAAACATTGACAGGACAAGAAGCACCACCACATTCATTGTAG
AGCCTATGTAAATACTAGTA

Downstream 100 bases:

>100_bases
AGAAAAGATTGATAAGGTGATATGTATGAAGGAATGGAATAAACAAATGGAACGAGGTGTGATTTATATTTACACACCAT
TCTGTGGAACATGTTCGGTT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 149; Mature: 149

Protein sequence:

>149_residues
MMALSNGSHPYNTNQIVINKHVSCLHKECYAMMINESNKVIIVEGLSDKRQIEKIIDDKVIIVCTNGTLGVEKLDELLET
YELDEKDVYILVDEDPSGMKLRKQLARELPHAEHIYVSSEYREVAATPMKVLANALIGARFTVNPTYLL

Sequences:

>Translated_149_residues
MMALSNGSHPYNTNQIVINKHVSCLHKECYAMMINESNKVIIVEGLSDKRQIEKIIDDKVIIVCTNGTLGVEKLDELLET
YELDEKDVYILVDEDPSGMKLRKQLARELPHAEHIYVSSEYREVAATPMKVLANALIGARFTVNPTYLL
>Mature_149_residues
MMALSNGSHPYNTNQIVINKHVSCLHKECYAMMINESNKVIIVEGLSDKRQIEKIIDDKVIIVCTNGTLGVEKLDELLET
YELDEKDVYILVDEDPSGMKLRKQLARELPHAEHIYVSSEYREVAATPMKVLANALIGARFTVNPTYLL

Specific function: Unknown

COG id: COG1658

COG function: function code L; Small primase-like proteins (Toprim domain)

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 Toprim domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006171 [H]

Pfam domain/function: PF01751 Toprim [H]

EC number: NA

Molecular weight: Translated: 16863; Mature: 16863

Theoretical pI: Translated: 5.26; Mature: 5.26

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.0 %Cys     (Translated Protein)
4.0 %Met     (Translated Protein)
6.0 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
4.0 %Met     (Mature Protein)
6.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MMALSNGSHPYNTNQIVINKHVSCLHKECYAMMINESNKVIIVEGLSDKRQIEKIIDDKV
CCCCCCCCCCCCCCEEEEEHHHHHHHHHHHEEEECCCCCEEEEECCCCHHHHHHHHCCCE
IIVCTNGTLGVEKLDELLETYELDEKDVYILVDEDPSGMKLRKQLARELPHAEHIYVSSE
EEEECCCCCCHHHHHHHHHHHCCCCCCEEEEEECCCCCHHHHHHHHHHCCCCEEEEEECC
YREVAATPMKVLANALIGARFTVNPTYLL
HHHHHCCHHHHHHHHHHCCEEECCCEEEC
>Mature Secondary Structure
MMALSNGSHPYNTNQIVINKHVSCLHKECYAMMINESNKVIIVEGLSDKRQIEKIIDDKV
CCCCCCCCCCCCCCEEEEEHHHHHHHHHHHEEEECCCCCEEEEECCCCHHHHHHHHCCCE
IIVCTNGTLGVEKLDELLETYELDEKDVYILVDEDPSGMKLRKQLARELPHAEHIYVSSE
EEEECCCCCCHHHHHHHHHHHCCCCCCEEEEEECCCCCHHHHHHHHHHCCCCEEEEEECC
YREVAATPMKVLANALIGARFTVNPTYLL
HHHHHCCHHHHHHHHHHCCEEECCCEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]