| Definition | Oceanobacillus iheyensis HTE831, complete genome. |
|---|---|
| Accession | NC_004193 |
| Length | 3,630,528 |
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The map label for this gene is leuS
Identifier: 23099762
GI number: 23099762
Start: 2357022
End: 2359436
Strand: Reverse
Name: leuS
Synonym: OB2307
Alternate gene names: 23099762
Gene position: 2359436-2357022 (Counterclockwise)
Preceding gene: 23099764
Following gene: 23099760
Centisome position: 64.99
GC content: 37.47
Gene sequence:
>2415_bases ATGAGTTTTCAGCATCGTCAAATAGAAAAGAAATGGCAAGATTATTGGGAAGACAATAAAACTTTTAAAACAGATACGTT CTCTAATAAGGAAAAGTTCTATGCATTAGATATGTTTCCTTATCCATCAGGGCAGGGATTACACGTAGGGCATCCAGAGG GATATACCGCTACAGATATTTTAGCCCGTATGAAACGTATGCAAGGATATGAAGTAATGCACCCAATGGGTTGGGATGCG TTTGGTCTTCCTGCTGAGCAATATGCAATTGATACTGGTAATAGCCCTGCAGAATTTACAAATCAAAATATTAATACGTT TAAACGTCAGATTAAAGAATTAGGTTTCTCTTATGATTGGGATAGAGAAATAAATACAACTGATCCAAATTACTATAAAT GGACACAATGGATCTTTAAAAAATTATATGAAAATGACCTAGCATATATGGATGAAGTCGCGGTGAACTGGTGTCCGGCT TTAGGCACAGTGCTTGCGAATGAAGAAGTAATTGATGGTAAAAGCGAAAGAGGCGGACATCCTGTAATCCGTAAGCCAAT GAAACAATGGATGTTAAAAATTACGGCATACGCTGACCGTTTGTTAGAAGATTTAAATGAATTAGATTGGCCAGATAGCC TAAAAGAAATGCAACGAAATTGGATTGGACGCTCAGAAGGTGCGGAAGTTACTTTCTCTATAAAAGGAAACGAAGGGACG TTTACTGTATTTACTACACGTCCGGATACATTATTTGGAGCAACATATGCTGTTGTCGCTCCGGAACATCCTTTAGTAAA AGAAATAACAACGTTGAGTCAAAAAGAAGCAGTTCAAAACTATTTAGATGAAATACAGACCAAATCAGATTTGGAAAGAA CAGATTTAGCTAAAGATAAGACTGGTGTATTTACGGGAGCGTATGCAATTAATCCGGTTAATGGAGAAGAAATGCCAATC TGGGTTGCGGATTATGTATTAATGAGCTATGGAACGGGAGCAATTATGGCTGTTCCTGCGCATGATGAACGTGATTATGA ATTTGCAAATACATTTGGCTTACCTATTAAAGAAGTAGTCGCTGGTGGGAATATAGATGATGAGGCTTATACTGGTGATG GTGAACATGTTAATTCTGAATTCTTGAATGGGTTGGGTAAGGAAGAAGCAATAACGAAAATGATTGATTGGCTAGAAGCT AATGGTAGTGGGGAGAAAAAAATAACTTATCGTCTACGTGACTGGTTATTTGCTCGTCAACGCTATTGGGGAGAACCAAT TCCAATTATTCATTGGGAAGACGGTACAATGACAGCTGTACCTGATGAGGATTTACCATTGACACTTCCTCAAGTTGCTG AAATAAAACCTTCAGGTACGGGAGAATCGCCATTAGCAAATAATACTGATTGGGTAAATGTAGTTGACCCAGAGACTGGA TTGAAAGGACGTCGTGAAACCAATACAATGCCACAGTGGGCCGGTAGTTGTTGGTATTTCTTACGTTATATTGATCCAAA TAATACAGAGCGATTGGCAGATCCAAAGGCATTAGAAGAATGGCTACCTATCGATATATATATAGGTGGAGCAGAACATG CGGTTCTCCATCTGTTATATGCTCGTTTCTGGCATAAATTCTTATTTGATATTGGAGTCGTCTCCACAAAAGAACCATTC CAAAAGCTATATAATCAAGGCATGATTCTTGGTGAAGGCAACGAAAAAATGAGTAAATCCAAAGGGAACGTAGTGAATCC TGATGATATAATCGATTCGCATGGCGCAGACACATTACGTTTATACGAGATGTTTATGGGACCGCTAGATGCTTCTGTTG CTTGGTCTACAAACGGATTAGATGGATCGCGTAGATTTTTAGATCGTGTATGGAGATTGTATGTAGGTGATGATGGTTCG CTTACAGATAAAATTATTGATGATGAATCCACTGAATTAGACAAGATTTATCATGAAACAGTGAAAAAAGTGACAGATGA CTTTGAACATATGCATTTTAATACTGGTATTTCACAAATGATGGTATTTATTAATGAATGCTATAAAGCGAATAAAATTC CTAAAATTTATGCGGAAGGCTTTGTTAAATTACTGTCACCAGTAGCACCACATTTAAGTGAAGAAATTTGGCAAAAACTT GGACACTCAGAATCAATAAGTAAGGCTACTTGGCCAGCATATGATGAATCAAAATTAGTAGAAGATGAAGTGGAAGTCGT TCTACAGATCATGGGTAAGGTTCGATCTAAAATTCAGGTTCCTGTTGATATTAGTAAGGATGATCTTGAAAAAGCGGCAT TAGATGACGAAAGCATGCAAAAATGGTTAGAAGGAAAAACTATCCGTAAAGTTATCGTTGTGCCAGGAAAGCTTGTAAAT ATAGTAGCAAATTAA
Upstream 100 bases:
>100_bases TAAAAGCTTCTCGTCCCTGTTTATGAGGGATGAGTGGCTTTTTTTAGTTTACTCAAAAAATTAAAGTGTAAGCAGTTTTA CTATGAAAGGAAGGGTTGAC
Downstream 100 bases:
>100_bases AAAAAGAAGCATTGATCTGGAAATGGTCAATGCTTCTTTTTATAGAGGTTATTCATCTTTATTTTCCTCTGTTGGATTTT CCGTTGGATTATCTGATTTC
Product: leucyl-tRNA synthetase
Products: NA
Alternate protein names: Leucine--tRNA ligase; LeuRS
Number of amino acids: Translated: 804; Mature: 803
Protein sequence:
>804_residues MSFQHRQIEKKWQDYWEDNKTFKTDTFSNKEKFYALDMFPYPSGQGLHVGHPEGYTATDILARMKRMQGYEVMHPMGWDA FGLPAEQYAIDTGNSPAEFTNQNINTFKRQIKELGFSYDWDREINTTDPNYYKWTQWIFKKLYENDLAYMDEVAVNWCPA LGTVLANEEVIDGKSERGGHPVIRKPMKQWMLKITAYADRLLEDLNELDWPDSLKEMQRNWIGRSEGAEVTFSIKGNEGT FTVFTTRPDTLFGATYAVVAPEHPLVKEITTLSQKEAVQNYLDEIQTKSDLERTDLAKDKTGVFTGAYAINPVNGEEMPI WVADYVLMSYGTGAIMAVPAHDERDYEFANTFGLPIKEVVAGGNIDDEAYTGDGEHVNSEFLNGLGKEEAITKMIDWLEA NGSGEKKITYRLRDWLFARQRYWGEPIPIIHWEDGTMTAVPDEDLPLTLPQVAEIKPSGTGESPLANNTDWVNVVDPETG LKGRRETNTMPQWAGSCWYFLRYIDPNNTERLADPKALEEWLPIDIYIGGAEHAVLHLLYARFWHKFLFDIGVVSTKEPF QKLYNQGMILGEGNEKMSKSKGNVVNPDDIIDSHGADTLRLYEMFMGPLDASVAWSTNGLDGSRRFLDRVWRLYVGDDGS LTDKIIDDESTELDKIYHETVKKVTDDFEHMHFNTGISQMMVFINECYKANKIPKIYAEGFVKLLSPVAPHLSEEIWQKL GHSESISKATWPAYDESKLVEDEVEVVLQIMGKVRSKIQVPVDISKDDLEKAALDDESMQKWLEGKTIRKVIVVPGKLVN IVAN
Sequences:
>Translated_804_residues MSFQHRQIEKKWQDYWEDNKTFKTDTFSNKEKFYALDMFPYPSGQGLHVGHPEGYTATDILARMKRMQGYEVMHPMGWDA FGLPAEQYAIDTGNSPAEFTNQNINTFKRQIKELGFSYDWDREINTTDPNYYKWTQWIFKKLYENDLAYMDEVAVNWCPA LGTVLANEEVIDGKSERGGHPVIRKPMKQWMLKITAYADRLLEDLNELDWPDSLKEMQRNWIGRSEGAEVTFSIKGNEGT FTVFTTRPDTLFGATYAVVAPEHPLVKEITTLSQKEAVQNYLDEIQTKSDLERTDLAKDKTGVFTGAYAINPVNGEEMPI WVADYVLMSYGTGAIMAVPAHDERDYEFANTFGLPIKEVVAGGNIDDEAYTGDGEHVNSEFLNGLGKEEAITKMIDWLEA NGSGEKKITYRLRDWLFARQRYWGEPIPIIHWEDGTMTAVPDEDLPLTLPQVAEIKPSGTGESPLANNTDWVNVVDPETG LKGRRETNTMPQWAGSCWYFLRYIDPNNTERLADPKALEEWLPIDIYIGGAEHAVLHLLYARFWHKFLFDIGVVSTKEPF QKLYNQGMILGEGNEKMSKSKGNVVNPDDIIDSHGADTLRLYEMFMGPLDASVAWSTNGLDGSRRFLDRVWRLYVGDDGS LTDKIIDDESTELDKIYHETVKKVTDDFEHMHFNTGISQMMVFINECYKANKIPKIYAEGFVKLLSPVAPHLSEEIWQKL GHSESISKATWPAYDESKLVEDEVEVVLQIMGKVRSKIQVPVDISKDDLEKAALDDESMQKWLEGKTIRKVIVVPGKLVN IVAN >Mature_803_residues SFQHRQIEKKWQDYWEDNKTFKTDTFSNKEKFYALDMFPYPSGQGLHVGHPEGYTATDILARMKRMQGYEVMHPMGWDAF GLPAEQYAIDTGNSPAEFTNQNINTFKRQIKELGFSYDWDREINTTDPNYYKWTQWIFKKLYENDLAYMDEVAVNWCPAL GTVLANEEVIDGKSERGGHPVIRKPMKQWMLKITAYADRLLEDLNELDWPDSLKEMQRNWIGRSEGAEVTFSIKGNEGTF TVFTTRPDTLFGATYAVVAPEHPLVKEITTLSQKEAVQNYLDEIQTKSDLERTDLAKDKTGVFTGAYAINPVNGEEMPIW VADYVLMSYGTGAIMAVPAHDERDYEFANTFGLPIKEVVAGGNIDDEAYTGDGEHVNSEFLNGLGKEEAITKMIDWLEAN GSGEKKITYRLRDWLFARQRYWGEPIPIIHWEDGTMTAVPDEDLPLTLPQVAEIKPSGTGESPLANNTDWVNVVDPETGL KGRRETNTMPQWAGSCWYFLRYIDPNNTERLADPKALEEWLPIDIYIGGAEHAVLHLLYARFWHKFLFDIGVVSTKEPFQ KLYNQGMILGEGNEKMSKSKGNVVNPDDIIDSHGADTLRLYEMFMGPLDASVAWSTNGLDGSRRFLDRVWRLYVGDDGSL TDKIIDDESTELDKIYHETVKKVTDDFEHMHFNTGISQMMVFINECYKANKIPKIYAEGFVKLLSPVAPHLSEEIWQKLG HSESISKATWPAYDESKLVEDEVEVVLQIMGKVRSKIQVPVDISKDDLEKAALDDESMQKWLEGKTIRKVIVVPGKLVNI VAN
Specific function: Unknown
COG id: COG0495
COG function: function code J; Leucyl-tRNA synthetase
Gene ontology:
Cell location: Cytoplasm
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the class-I aminoacyl-tRNA synthetase family
Homologues:
Organism=Homo sapiens, GI7661872, Length=872, Percent_Identity=33.0275229357798, Blast_Score=470, Evalue=1e-132, Organism=Escherichia coli, GI1786861, Length=866, Percent_Identity=42.6096997690531, Blast_Score=696, Evalue=0.0, Organism=Escherichia coli, GI1790708, Length=391, Percent_Identity=24.8081841432225, Blast_Score=107, Evalue=3e-24, Organism=Caenorhabditis elegans, GI71997510, Length=813, Percent_Identity=29.2742927429274, Blast_Score=314, Evalue=1e-85, Organism=Caenorhabditis elegans, GI71997517, Length=806, Percent_Identity=29.4044665012407, Blast_Score=314, Evalue=1e-85, Organism=Caenorhabditis elegans, GI212645227, Length=335, Percent_Identity=28.955223880597, Blast_Score=125, Evalue=6e-29, Organism=Caenorhabditis elegans, GI17510661, Length=936, Percent_Identity=20.5128205128205, Blast_Score=118, Evalue=1e-26, Organism=Saccharomyces cerevisiae, GI6323414, Length=875, Percent_Identity=35.4285714285714, Blast_Score=472, Evalue=1e-134, Organism=Saccharomyces cerevisiae, GI6321531, Length=369, Percent_Identity=23.3062330623306, Blast_Score=83, Evalue=1e-16, Organism=Drosophila melanogaster, GI21355409, Length=873, Percent_Identity=30.6987399770905, Blast_Score=383, Evalue=1e-106,
Paralogues:
None
Copy number: 800 Molecules/Cell In: Glucose minimal media [C]
Swissprot (AC and ID): SYL_OCEIH (Q8EP12)
Other databases:
- EMBL: BA000028 - RefSeq: NP_693228.1 - ProteinModelPortal: Q8EP12 - SMR: Q8EP12 - GeneID: 1015873 - GenomeReviews: BA000028_GR - KEGG: oih:OB2307 - NMPDR: fig|221109.1.peg.2304 - HOGENOM: HBG693845 - OMA: ERGNFPV - ProtClustDB: PRK00390 - BioCyc: OIHE221109:OB2307-MONOMER - BRENDA: 6.1.1.4 - GO: GO:0005737 - HAMAP: MF_00049_B - InterPro: IPR001412 - InterPro: IPR002300 - InterPro: IPR002302 - InterPro: IPR014729 - InterPro: IPR009080 - InterPro: IPR013155 - InterPro: IPR009008 - Gene3D: G3DSA:3.40.50.620 - PANTHER: PTHR11946:SF7 - PRINTS: PR00985 - TIGRFAMs: TIGR00396
Pfam domain/function: PF08264 Anticodon_1; PF00133 tRNA-synt_1; SSF47323 tRNAsyn_1a_bind; SSF50677 ValRS_IleRS_edit
EC number: =6.1.1.4
Molecular weight: Translated: 91702; Mature: 91571
Theoretical pI: Translated: 4.61; Mature: 4.61
Prosite motif: PS00178 AA_TRNA_LIGASE_I
Important sites: BINDING 579-579
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSFQHRQIEKKWQDYWEDNKTFKTDTFSNKEKFYALDMFPYPSGQGLHVGHPEGYTATDI CCCCHHHHHHHHHHHHCCCCCEECCCCCCCCCEEEEEECCCCCCCCEECCCCCCCCHHHH LARMKRMQGYEVMHPMGWDAFGLPAEQYAIDTGNSPAEFTNQNINTFKRQIKELGFSYDW HHHHHHHCCCEEECCCCCCCCCCCHHHEEECCCCCCHHHCCCCHHHHHHHHHHCCCCCCC DREINTTDPNYYKWTQWIFKKLYENDLAYMDEVAVNWCPALGTVLANEEVIDGKSERGGH CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHCCCCCCCCCC PVIRKPMKQWMLKITAYADRLLEDLNELDWPDSLKEMQRNWIGRSEGAEVTFSIKGNEGT HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCEEEEEEECCCCE FTVFTTRPDTLFGATYAVVAPEHPLVKEITTLSQKEAVQNYLDEIQTKSDLERTDLAKDK EEEEECCCCCHHCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHCCCCC TGVFTGAYAINPVNGEEMPIWVADYVLMSYGTGAIMAVPAHDERDYEFANTFGLPIKEVV CCEEEEEEEECCCCCCCCCCHHHHHHHHHCCCCEEEEECCCCCCCCCHHHHCCCCHHHHH AGGNIDDEAYTGDGEHVNSEFLNGLGKEEAITKMIDWLEANGSGEKKITYRLRDWLFARQ CCCCCCCCCCCCCCCCCCHHHHHCCCHHHHHHHHHHHHHCCCCCCCEEHHHHHHHHHHHH RYWGEPIPIIHWEDGTMTAVPDEDLPLTLPQVAEIKPSGTGESPLANNTDWVNVVDPETG HHCCCCCCEEEECCCEEEECCCCCCCCCCCHHHCCCCCCCCCCCCCCCCCEEEEECCCCC LKGRRETNTMPQWAGSCWYFLRYIDPNNTERLADPKALEEWLPIDIYIGGAEHAVLHLLY CCCCCCCCCCCHHCCCEEEEEEEECCCCCCCCCCHHHHHHCCCEEEEECCHHHHHHHHHH ARFWHKFLFDIGVVSTKEPFQKLYNQGMILGEGNEKMSKSKGNVVNPDDIIDSHGADTLR HHHHHHHHHHHCCCCCHHHHHHHHHCCEEEECCCHHHHHCCCCCCCHHHHHCCCCCHHHH LYEMFMGPLDASVAWSTNGLDGSRRFLDRVWRLYVGDDGSLTDKIIDDESTELDKIYHET HHHHHHCCCCCCEEECCCCCCHHHHHHHHHHHEEECCCCCCCHHHCCCCCHHHHHHHHHH VKKVTDDFEHMHFNTGISQMMVFINECYKANKIPKIYAEGFVKLLSPVAPHLSEEIWQKL HHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHC GHSESISKATWPAYDESKLVEDEVEVVLQIMGKVRSKIQVPVDISKDDLEKAALDDESMQ CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHEECCCCCCHHHHHHHHCCHHHHH KWLEGKTIRKVIVVPGKLVNIVAN HHHCCCCEEEEEECCCHHHHEECC >Mature Secondary Structure SFQHRQIEKKWQDYWEDNKTFKTDTFSNKEKFYALDMFPYPSGQGLHVGHPEGYTATDI CCCHHHHHHHHHHHHCCCCCEECCCCCCCCCEEEEEECCCCCCCCEECCCCCCCCHHHH LARMKRMQGYEVMHPMGWDAFGLPAEQYAIDTGNSPAEFTNQNINTFKRQIKELGFSYDW HHHHHHHCCCEEECCCCCCCCCCCHHHEEECCCCCCHHHCCCCHHHHHHHHHHCCCCCCC DREINTTDPNYYKWTQWIFKKLYENDLAYMDEVAVNWCPALGTVLANEEVIDGKSERGGH CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHCCCCCCCCCC PVIRKPMKQWMLKITAYADRLLEDLNELDWPDSLKEMQRNWIGRSEGAEVTFSIKGNEGT HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCEEEEEEECCCCE FTVFTTRPDTLFGATYAVVAPEHPLVKEITTLSQKEAVQNYLDEIQTKSDLERTDLAKDK EEEEECCCCCHHCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHCCCCC TGVFTGAYAINPVNGEEMPIWVADYVLMSYGTGAIMAVPAHDERDYEFANTFGLPIKEVV CCEEEEEEEECCCCCCCCCCHHHHHHHHHCCCCEEEEECCCCCCCCCHHHHCCCCHHHHH AGGNIDDEAYTGDGEHVNSEFLNGLGKEEAITKMIDWLEANGSGEKKITYRLRDWLFARQ CCCCCCCCCCCCCCCCCCHHHHHCCCHHHHHHHHHHHHHCCCCCCCEEHHHHHHHHHHHH RYWGEPIPIIHWEDGTMTAVPDEDLPLTLPQVAEIKPSGTGESPLANNTDWVNVVDPETG HHCCCCCCEEEECCCEEEECCCCCCCCCCCHHHCCCCCCCCCCCCCCCCCEEEEECCCCC LKGRRETNTMPQWAGSCWYFLRYIDPNNTERLADPKALEEWLPIDIYIGGAEHAVLHLLY CCCCCCCCCCCHHCCCEEEEEEEECCCCCCCCCCHHHHHHCCCEEEEECCHHHHHHHHHH ARFWHKFLFDIGVVSTKEPFQKLYNQGMILGEGNEKMSKSKGNVVNPDDIIDSHGADTLR HHHHHHHHHHHCCCCCHHHHHHHHHCCEEEECCCHHHHHCCCCCCCHHHHHCCCCCHHHH LYEMFMGPLDASVAWSTNGLDGSRRFLDRVWRLYVGDDGSLTDKIIDDESTELDKIYHET HHHHHHCCCCCCEEECCCCCCHHHHHHHHHHHEEECCCCCCCHHHCCCCCHHHHHHHHHH VKKVTDDFEHMHFNTGISQMMVFINECYKANKIPKIYAEGFVKLLSPVAPHLSEEIWQKL HHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHC GHSESISKATWPAYDESKLVEDEVEVVLQIMGKVRSKIQVPVDISKDDLEKAALDDESMQ CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHEECCCCCCHHHHHHHHCCHHHHH KWLEGKTIRKVIVVPGKLVNIVAN HHHCCCCEEEEEECCCHHHHEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 12235376