Click here to switch to the map view.

The map label for this gene is ytmP [H]

Identifier: 23099751

GI number: 23099751

Start: 2341461

End: 2342273

Strand: Reverse

Name: ytmP [H]

Synonym: OB2296

Alternate gene names: 23099751

Gene position: 2342273-2341461 (Counterclockwise)

Preceding gene: 23099752

Following gene: 23099749

Centisome position: 64.52

GC content: 35.18

Gene sequence:

>813_bases
ATGATTAAGTGGCTTGAGCAAGCTCTAGGCACAGGGTGGAATATTACACCAGCAGGAGGTCTCACTGGTGATGCTTTTAT
AGCGGAAAAAAACGGGAGACGTTTATTTTTAAAACGTAATTCTTCACCGTTTCTTGCTGTATTATCTGCAGAAGGAATTG
TCCCAAAATTAATTTGGACAAAACGTATGGAAAATGGTGATGTTATTACTGCGCAAGAGTGGTTAGAAGGTCGTTCGCTA
AATGTATACGAAATGCAACAACAAAATGTGGCTAATTTATTATATAAAATACATCACTCTACAGAGCTTTTGCATATGCT
GCTTAGAATGGGCAAGAAACCAGTTACTTCCGATGAAAGTTTAAAATCAATAAAAAAGAAACTTCATAAACAAGGTATGA
TCGATAGTTATAGTGAAGTAATTGAAGCTATCCACTACCTAGAGAAATTGTTACCGGAAACTCGCGATCAGCAACTTGCA
GTATGTCATTGTGATATTAATCATAATAACCTTATACTGACTAGTGAAAAAAATATCTTTTTAGTTGATTGGGATAACGC
AATGATTGCTGATCCGGCAACAGATATAGGTATGCTTTTAAAATGGTACTTACCAAAAGAAGACTGGGTTCCATGGTTAA
AACAATATGGCATAGAACCAAGCCAGAATTTATTTACTCGCATGTATTGGTATTTATTGCATGATTCCTTGCATTTTTTA
AGTTGGCATAATTCCAGAAATGAACCAGAGAAGGTTCGTCAACGTCTATGGGATTTACAGGAATTAAATGCGCAAATAAG
AAATTTATTCTAA

Upstream 100 bases:

>100_bases
ATCTCAATTATAATGAAATAAAAAAGCAATAATTGTATTTTAATCGAAATCTAGATACAATGTATACTTGAACGCTAAAT
TTGAAAGATGTGAAGAAGTT

Downstream 100 bases:

>100_bases
GTTAGTCTGTTCAATTGCATTTATCCAATGTCTTATATTATTTTTATTTGAACTAACATGATTTGGCAGACTTTGTGCGT
ATTCGCCTTGTCTGCCATAA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 270; Mature: 270

Protein sequence:

>270_residues
MIKWLEQALGTGWNITPAGGLTGDAFIAEKNGRRLFLKRNSSPFLAVLSAEGIVPKLIWTKRMENGDVITAQEWLEGRSL
NVYEMQQQNVANLLYKIHHSTELLHMLLRMGKKPVTSDESLKSIKKKLHKQGMIDSYSEVIEAIHYLEKLLPETRDQQLA
VCHCDINHNNLILTSEKNIFLVDWDNAMIADPATDIGMLLKWYLPKEDWVPWLKQYGIEPSQNLFTRMYWYLLHDSLHFL
SWHNSRNEPEKVRQRLWDLQELNAQIRNLF

Sequences:

>Translated_270_residues
MIKWLEQALGTGWNITPAGGLTGDAFIAEKNGRRLFLKRNSSPFLAVLSAEGIVPKLIWTKRMENGDVITAQEWLEGRSL
NVYEMQQQNVANLLYKIHHSTELLHMLLRMGKKPVTSDESLKSIKKKLHKQGMIDSYSEVIEAIHYLEKLLPETRDQQLA
VCHCDINHNNLILTSEKNIFLVDWDNAMIADPATDIGMLLKWYLPKEDWVPWLKQYGIEPSQNLFTRMYWYLLHDSLHFL
SWHNSRNEPEKVRQRLWDLQELNAQIRNLF
>Mature_270_residues
MIKWLEQALGTGWNITPAGGLTGDAFIAEKNGRRLFLKRNSSPFLAVLSAEGIVPKLIWTKRMENGDVITAQEWLEGRSL
NVYEMQQQNVANLLYKIHHSTELLHMLLRMGKKPVTSDESLKSIKKKLHKQGMIDSYSEVIEAIHYLEKLLPETRDQQLA
VCHCDINHNNLILTSEKNIFLVDWDNAMIADPATDIGMLLKWYLPKEDWVPWLKQYGIEPSQNLFTRMYWYLLHDSLHFL
SWHNSRNEPEKVRQRLWDLQELNAQIRNLF

Specific function: Unknown

COG id: COG0510

COG function: function code M; Predicted choline kinase involved in LPS biosynthesis

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the aminoglycoside phosphotransferase family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002575
- InterPro:   IPR011009 [H]

Pfam domain/function: PF01636 APH [H]

EC number: NA

Molecular weight: Translated: 31579; Mature: 31579

Theoretical pI: Translated: 7.37; Mature: 7.37

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIKWLEQALGTGWNITPAGGLTGDAFIAEKNGRRLFLKRNSSPFLAVLSAEGIVPKLIWT
CHHHHHHHHCCCCCCCCCCCCCCCEEEEECCCCEEEEEECCCCEEEEEECCCCHHHHHHH
KRMENGDVITAQEWLEGRSLNVYEMQQQNVANLLYKIHHSTELLHMLLRMGKKPVTSDES
HCCCCCCEEEHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHH
LKSIKKKLHKQGMIDSYSEVIEAIHYLEKLLPETRDQQLAVCHCDINHNNLILTSEKNIF
HHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEEECCCCEEEEECCCCEE
LVDWDNAMIADPATDIGMLLKWYLPKEDWVPWLKQYGIEPSQNLFTRMYWYLLHDSLHFL
EEECCCCEECCCCHHHHHHHHHHCCCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHH
SWHNSRNEPEKVRQRLWDLQELNAQIRNLF
HHCCCCCCHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MIKWLEQALGTGWNITPAGGLTGDAFIAEKNGRRLFLKRNSSPFLAVLSAEGIVPKLIWT
CHHHHHHHHCCCCCCCCCCCCCCCEEEEECCCCEEEEEECCCCEEEEEECCCCHHHHHHH
KRMENGDVITAQEWLEGRSLNVYEMQQQNVANLLYKIHHSTELLHMLLRMGKKPVTSDES
HCCCCCCEEEHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHH
LKSIKKKLHKQGMIDSYSEVIEAIHYLEKLLPETRDQQLAVCHCDINHNNLILTSEKNIF
HHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEEECCCCEEEEECCCCEE
LVDWDNAMIADPATDIGMLLKWYLPKEDWVPWLKQYGIEPSQNLFTRMYWYLLHDSLHFL
EEECCCCEECCCCHHHHHHHHHHCCCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHH
SWHNSRNEPEKVRQRLWDLQELNAQIRNLF
HHCCCCCCHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9387221; 9384377 [H]