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The map label for this gene is yqfD [H]

Identifier: 23099411

GI number: 23099411

Start: 1984431

End: 1985654

Strand: Reverse

Name: yqfD [H]

Synonym: OB1956

Alternate gene names: 23099411

Gene position: 1985654-1984431 (Counterclockwise)

Preceding gene: 23099412

Following gene: 23099410

Centisome position: 54.69

GC content: 33.01

Gene sequence:

>1224_bases
ATGAAACGTAATTATGGTAAGAGGATCCGAGGATATGTAACTGTTCGAGTCTCTGGCGAAAAGCCGGAGCTATTTTTCCA
AAAATGTGCTAATGAAGGTATTTTGGTATGGGATGCAAAAAAAATCTCTTCAAAAGATTGTGTTGCTAAATTAAAGTTAC
AAGATATTAAGAAATTAAAACAATTACGTAGAAGAACATTATATAAAATTTCTTTTGAAGAGAGGAAAGGATTACCGTTT
GGATTTGCTCGGTTTTTGAAGAAGCGATTTTTAGTAATAGGTATATTAGTTGGAGTATTGTTTTTTTTATTTTTATCTAA
TTTGTTATGGTCTGTTAATATCACAGGTGTACCGAAAGAAATAGAAGAAAAAATTAAAGTGCAATTAGATAGTTATGGTA
TTCACTCTGGTGTGTGGTTATTTTCTGTGGATTCACCAAAAGATATACAAAGAAATTTATTAGATGATGTTCCAGAATTG
TTGTGGGCAGGCGTTGAATTACGAGGGACAACCCTATACTTAGAAGGGGTGGAAAAGTTAATTGTTGAAGAACTAGACCC
AGGTGAACCAGGAAATATTGTTGCTGCTAAAGAAGGAGTAATAACAAGGATGTATGTTTCAAAAGGGGAACCTGTAAAAC
AAATTAATGATTATGTTAAACCAGGAGATTTACTCGTATCTGGAGACTTGAGTTATGAAGAAAATCAAGATGAAGATGAA
AGTGACTCGGAAAAGAGAAAAACTCCACCAATTACTGCTGAAGCAGAGATCTTTGCAAATACATGGTATGAAGTTACATT
AACAGTACCCTTATCGTATAATTATGAACAGTTAACAGGAAAAAGTAAAAATAAATATTATATGAAAATGGGACAACTTC
AATTGCCTATATGGGGATTTCGTGATCCCGAATTTGAACAAACACAAGTGGAATTAAATGAAAAACCGATACAGTTTTTA
AAATGGCAGCTACCAATTTCAATTATAGAATCTGAAATTAACGAAAAACAATTATATGAAGGTGAAAGAACGAAGGAAGA
AGCGATTGATGCAGGGAAAAAGCAAGCGGTAAAACAACTAGAGACTGAACTAGGTCCTGATGCAGAAATATTGTCAGAAA
AAGTTTTGCATGAACGTATCGAGCATGGTAAAGTAAAATTAATCGTTTATGTTTCTGTAGAAGAAAATATTGTTAAAAAT
GAACCTATTCGCCAAGGAGACTGA

Upstream 100 bases:

>100_bases
ATTTGTATTAAAAATGATGTTACCGAAAGAAATAATGTTGGAGGGTACCATTCATGAGGTGAAGTTTTTACCGAATTAAC
TCGTAGGACAGGAGGTTCCA

Downstream 100 bases:

>100_bases
TTATGTCCGAACGTTTAACTGATTTAGATTTGCAATTAAATGGTACCAATGAAACTTTAGGTTTATTCGGTACAAATGAT
AAGCACCTACAACAGCTAGA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 407; Mature: 407

Protein sequence:

>407_residues
MKRNYGKRIRGYVTVRVSGEKPELFFQKCANEGILVWDAKKISSKDCVAKLKLQDIKKLKQLRRRTLYKISFEERKGLPF
GFARFLKKRFLVIGILVGVLFFLFLSNLLWSVNITGVPKEIEEKIKVQLDSYGIHSGVWLFSVDSPKDIQRNLLDDVPEL
LWAGVELRGTTLYLEGVEKLIVEELDPGEPGNIVAAKEGVITRMYVSKGEPVKQINDYVKPGDLLVSGDLSYEENQDEDE
SDSEKRKTPPITAEAEIFANTWYEVTLTVPLSYNYEQLTGKSKNKYYMKMGQLQLPIWGFRDPEFEQTQVELNEKPIQFL
KWQLPISIIESEINEKQLYEGERTKEEAIDAGKKQAVKQLETELGPDAEILSEKVLHERIEHGKVKLIVYVSVEENIVKN
EPIRQGD

Sequences:

>Translated_407_residues
MKRNYGKRIRGYVTVRVSGEKPELFFQKCANEGILVWDAKKISSKDCVAKLKLQDIKKLKQLRRRTLYKISFEERKGLPF
GFARFLKKRFLVIGILVGVLFFLFLSNLLWSVNITGVPKEIEEKIKVQLDSYGIHSGVWLFSVDSPKDIQRNLLDDVPEL
LWAGVELRGTTLYLEGVEKLIVEELDPGEPGNIVAAKEGVITRMYVSKGEPVKQINDYVKPGDLLVSGDLSYEENQDEDE
SDSEKRKTPPITAEAEIFANTWYEVTLTVPLSYNYEQLTGKSKNKYYMKMGQLQLPIWGFRDPEFEQTQVELNEKPIQFL
KWQLPISIIESEINEKQLYEGERTKEEAIDAGKKQAVKQLETELGPDAEILSEKVLHERIEHGKVKLIVYVSVEENIVKN
EPIRQGD
>Mature_407_residues
MKRNYGKRIRGYVTVRVSGEKPELFFQKCANEGILVWDAKKISSKDCVAKLKLQDIKKLKQLRRRTLYKISFEERKGLPF
GFARFLKKRFLVIGILVGVLFFLFLSNLLWSVNITGVPKEIEEKIKVQLDSYGIHSGVWLFSVDSPKDIQRNLLDDVPEL
LWAGVELRGTTLYLEGVEKLIVEELDPGEPGNIVAAKEGVITRMYVSKGEPVKQINDYVKPGDLLVSGDLSYEENQDEDE
SDSEKRKTPPITAEAEIFANTWYEVTLTVPLSYNYEQLTGKSKNKYYMKMGQLQLPIWGFRDPEFEQTQVELNEKPIQFL
KWQLPISIIESEINEKQLYEGERTKEEAIDAGKKQAVKQLETELGPDAEILSEKVLHERIEHGKVKLIVYVSVEENIVKN
EPIRQGD

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Single-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: To B.megaterium spoIV [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010690 [H]

Pfam domain/function: PF06898 YqfD [H]

EC number: NA

Molecular weight: Translated: 46789; Mature: 46789

Theoretical pI: Translated: 5.49; Mature: 5.49

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
1.5 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
1.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKRNYGKRIRGYVTVRVSGEKPELFFQKCANEGILVWDAKKISSKDCVAKLKLQDIKKLK
CCCCCCCCEEEEEEEEECCCCCHHHHHHHCCCCEEEEECHHCCCHHHHHHHHHHHHHHHH
QLRRRTLYKISFEERKGLPFGFARFLKKRFLVIGILVGVLFFLFLSNLLWSVNITGVPKE
HHHHHHHEEEEHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEECCCCCHH
IEEKIKVQLDSYGIHSGVWLFSVDSPKDIQRNLLDDVPELLWAGVELRGTTLYLEGVEKL
HHHHHEEEEECCCCCCCEEEEECCCHHHHHHHHHHHHHHHHHCCCEECCCEEEHHHHHHH
IVEELDPGEPGNIVAAKEGVITRMYVSKGEPVKQINDYVKPGDLLVSGDLSYEENQDEDE
HHHHCCCCCCCCEEEECCCCEEEEEECCCCCHHHHHHHCCCCCEEEECCCCCCCCCCCCC
SDSEKRKTPPITAEAEIFANTWYEVTLTVPLSYNYEQLTGKSKNKYYMKMGQLQLPIWGF
CCHHHHCCCCCCCCCEEEECCEEEEEEEEEECCCHHHHCCCCCCEEEEEECCEECCEECC
RDPEFEQTQVELNEKPIQFLKWQLPISIIESEINEKQLYEGERTKEEAIDAGKKQAVKQL
CCCCCCCHHEECCCCCHHHHHHHCCHHHHHHHCCHHHHHCCCCHHHHHHCCHHHHHHHHH
ETELGPDAEILSEKVLHERIEHGKVKLIVYVSVEENIVKNEPIRQGD
HHHCCCCHHHHHHHHHHHHHHCCCEEEEEEEEECCCHHCCCCCCCCC
>Mature Secondary Structure
MKRNYGKRIRGYVTVRVSGEKPELFFQKCANEGILVWDAKKISSKDCVAKLKLQDIKKLK
CCCCCCCCEEEEEEEEECCCCCHHHHHHHCCCCEEEEECHHCCCHHHHHHHHHHHHHHHH
QLRRRTLYKISFEERKGLPFGFARFLKKRFLVIGILVGVLFFLFLSNLLWSVNITGVPKE
HHHHHHHEEEEHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEECCCCCHH
IEEKIKVQLDSYGIHSGVWLFSVDSPKDIQRNLLDDVPELLWAGVELRGTTLYLEGVEKL
HHHHHEEEEECCCCCCCEEEEECCCHHHHHHHHHHHHHHHHHCCCEECCCEEEHHHHHHH
IVEELDPGEPGNIVAAKEGVITRMYVSKGEPVKQINDYVKPGDLLVSGDLSYEENQDEDE
HHHHCCCCCCCCEEEECCCCEEEEEECCCCCHHHHHHHCCCCCEEEECCCCCCCCCCCCC
SDSEKRKTPPITAEAEIFANTWYEVTLTVPLSYNYEQLTGKSKNKYYMKMGQLQLPIWGF
CCHHHHCCCCCCCCCEEEECCEEEEEEEEEECCCHHHHCCCCCCEEEEEECCEECCEECC
RDPEFEQTQVELNEKPIQFLKWQLPISIIESEINEKQLYEGERTKEEAIDAGKKQAVKQL
CCCCCCCHHEECCCCCHHHHHHHCCHHHHHHHCCHHHHHCCCCHHHHHHCCHHHHHHHHH
ETELGPDAEILSEKVLHERIEHGKVKLIVYVSVEENIVKNEPIRQGD
HHHCCCCHHHHHHHHHHHHHHCCCEEEEEEEEECCCHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 8969508; 9384377 [H]