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The map label for this gene is yqfO [H]

Identifier: 23099395

GI number: 23099395

Start: 1966930

End: 1968048

Strand: Reverse

Name: yqfO [H]

Synonym: OB1940

Alternate gene names: 23099395

Gene position: 1968048-1966930 (Counterclockwise)

Preceding gene: 23099396

Following gene: 23099394

Centisome position: 54.21

GC content: 33.87

Gene sequence:

>1119_bases
ATGAAAAAAACAACATGGAAACACGCTGATTTTTTTCGAGCAATGGATGTTTGGGCACCGAAACATTTAGCATATGATTG
GGATAATGTAGGTTTGCAAATAGGATCTTTTAATGCAATTACAAGCAAGGTTCTTATCACATTAGACGTTACTGAAAGTG
TCGTAGACGAAGCAATAGAAAAAGGAATGAATTTAATTATTGCGCATCATTCCCTATTATTTCAACCATTAAAACAGATT
AATATGGATACACCTAAGGGAAGAACAGTACAAAAATTGATAAAAAATGATATTACTGTATATGCTTCTCATACAAATTT
AGATGCAGCAAATAACGGGGTTAATGATATGTTAGCTACAGAATTAAAGCTCACTCATACAACTCCACTAGTGCCAGTAT
ATAATGAGAAAAATTATAAAGTAGTAATTTATGTACCAGAAAGTCATATAGAAAAGATCCGACAAGCGTTTGCTGAGTCT
GGAGCCGGTTATATAGGGAATTATAGTCATTGTACTTTTCAAAGCCCGGGACAGGGGACATTTAAACCATTGGAGGGTAC
TGATCCATACATTGGGGAACAGGATAAAATCACATATGTCGATGAATATAAGATAGAGACTATTGTTCCAGAAAGTATAC
TTTCAAATGTTGTGAAATCAATCCTTTCTGCACATCCTTATGAGGAACCCGCTTATGATATTTACCCTTTAGAAAATAAA
ACTACTAATTTTGGTATTGGTCGTATTGGTAACTTAACAGAACCAACTACATTAGATTCTTTTATAAAAACAGTCAAAAC
TCAATTTCAGTTAGAAGGAATACGTATTTCAGGAAATAAAGATAAAAAGATCAAGCGAGTAGCAATTTTAGGTGGGAGCG
GTGAGAAATATGTTTCCCATGCTATGCGTAAGAAAGCGGATGTTTATATCACTGGAGATATGACTTTTCACATTGCTCAA
GATGCTGCTGAAATGGGATTAACTGTAATTGATGCTGGACATTACATTGAAAAAGTTATGAAATACTATACGAAACAAAA
ACTAGCACAGACGATGGAATTGGATAAGGATTTTATAGAGGTATCTGAAATTAATACAGATCCATTCCAGTTTGTGTAG

Upstream 100 bases:

>100_bases
ACACGTGTTGTCGAACAGATGAAGCAAGCAAGGCAAATGGATCGAGATAAAATCGATCAATTTATTAACGAATTGGATTG
GATGCAGGAGGTCTTAAACA

Downstream 100 bases:

>100_bases
AAGTAGACAGGAGGTCATTACATGGGTATGAAATTTGAAGATTTACAATTAAACCCCATTGTAAATGATGTTATTGAACA
GTTAAAATTTAAAAATCCTA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 372; Mature: 372

Protein sequence:

>372_residues
MKKTTWKHADFFRAMDVWAPKHLAYDWDNVGLQIGSFNAITSKVLITLDVTESVVDEAIEKGMNLIIAHHSLLFQPLKQI
NMDTPKGRTVQKLIKNDITVYASHTNLDAANNGVNDMLATELKLTHTTPLVPVYNEKNYKVVIYVPESHIEKIRQAFAES
GAGYIGNYSHCTFQSPGQGTFKPLEGTDPYIGEQDKITYVDEYKIETIVPESILSNVVKSILSAHPYEEPAYDIYPLENK
TTNFGIGRIGNLTEPTTLDSFIKTVKTQFQLEGIRISGNKDKKIKRVAILGGSGEKYVSHAMRKKADVYITGDMTFHIAQ
DAAEMGLTVIDAGHYIEKVMKYYTKQKLAQTMELDKDFIEVSEINTDPFQFV

Sequences:

>Translated_372_residues
MKKTTWKHADFFRAMDVWAPKHLAYDWDNVGLQIGSFNAITSKVLITLDVTESVVDEAIEKGMNLIIAHHSLLFQPLKQI
NMDTPKGRTVQKLIKNDITVYASHTNLDAANNGVNDMLATELKLTHTTPLVPVYNEKNYKVVIYVPESHIEKIRQAFAES
GAGYIGNYSHCTFQSPGQGTFKPLEGTDPYIGEQDKITYVDEYKIETIVPESILSNVVKSILSAHPYEEPAYDIYPLENK
TTNFGIGRIGNLTEPTTLDSFIKTVKTQFQLEGIRISGNKDKKIKRVAILGGSGEKYVSHAMRKKADVYITGDMTFHIAQ
DAAEMGLTVIDAGHYIEKVMKYYTKQKLAQTMELDKDFIEVSEINTDPFQFV
>Mature_372_residues
MKKTTWKHADFFRAMDVWAPKHLAYDWDNVGLQIGSFNAITSKVLITLDVTESVVDEAIEKGMNLIIAHHSLLFQPLKQI
NMDTPKGRTVQKLIKNDITVYASHTNLDAANNGVNDMLATELKLTHTTPLVPVYNEKNYKVVIYVPESHIEKIRQAFAES
GAGYIGNYSHCTFQSPGQGTFKPLEGTDPYIGEQDKITYVDEYKIETIVPESILSNVVKSILSAHPYEEPAYDIYPLENK
TTNFGIGRIGNLTEPTTLDSFIKTVKTQFQLEGIRISGNKDKKIKRVAILGGSGEKYVSHAMRKKADVYITGDMTFHIAQ
DAAEMGLTVIDAGHYIEKVMKYYTKQKLAQTMELDKDFIEVSEINTDPFQFV

Specific function: Unknown

COG id: COG3323

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0135 (NIF3) family [H]

Homologues:

Organism=Homo sapiens, GI215272360, Length=375, Percent_Identity=27.4666666666667, Blast_Score=112, Evalue=4e-25,
Organism=Homo sapiens, GI56605983, Length=375, Percent_Identity=27.4666666666667, Blast_Score=112, Evalue=4e-25,
Organism=Homo sapiens, GI209862879, Length=375, Percent_Identity=27.7333333333333, Blast_Score=112, Evalue=4e-25,
Organism=Homo sapiens, GI215272362, Length=123, Percent_Identity=34.1463414634146, Blast_Score=80, Evalue=4e-15,
Organism=Saccharomyces cerevisiae, GI6321217, Length=105, Percent_Identity=40, Blast_Score=74, Evalue=3e-14,
Organism=Drosophila melanogaster, GI19921430, Length=127, Percent_Identity=39.3700787401575, Blast_Score=89, Evalue=6e-18,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002678
- InterPro:   IPR017221 [H]

Pfam domain/function: PF01784 NIF3 [H]

EC number: NA

Molecular weight: Translated: 41869; Mature: 41869

Theoretical pI: Translated: 6.38; Mature: 6.38

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKTTWKHADFFRAMDVWAPKHLAYDWDNVGLQIGSFNAITSKVLITLDVTESVVDEAIE
CCCCCCCHHHHHHHHHHCCCCHHCCCCCCCCEEECCCHHCCEEEEEEEECHHHHHHHHHH
KGMNLIIAHHSLLFQPLKQINMDTPKGRTVQKLIKNDITVYASHTNLDAANNGVNDMLAT
CCCEEEEEHHHHHHHHHHHCCCCCCCCHHHHHHHHCCEEEEEECCCCCCCCCCHHHHHHH
ELKLTHTTPLVPVYNEKNYKVVIYVPESHIEKIRQAFAESGAGYIGNYSHCTFQSPGQGT
EEEEECCCCEEEEECCCCCEEEEEECHHHHHHHHHHHHHCCCCCCCCCCEEEECCCCCCC
FKPLEGTDPYIGEQDKITYVDEYKIETIVPESILSNVVKSILSAHPYEEPAYDIYPLENK
CCCCCCCCCCCCCCCCEEEEECEEEEEECHHHHHHHHHHHHHHCCCCCCCCCEEEECCCC
TTNFGIGRIGNLTEPTTLDSFIKTVKTQFQLEGIRISGNKDKKIKRVAILGGSGEKYVSH
CCCCCCCCCCCCCCCCHHHHHHHHHHHHEEEEEEEECCCCCCCEEEEEEECCCCHHHHHH
AMRKKADVYITGDMTFHIAQDAAEMGLTVIDAGHYIEKVMKYYTKQKLAQTMELDKDFIE
HHHCCCCEEEECCEEEEEEHHHHHCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHH
VSEINTDPFQFV
HHCCCCCCCCCC
>Mature Secondary Structure
MKKTTWKHADFFRAMDVWAPKHLAYDWDNVGLQIGSFNAITSKVLITLDVTESVVDEAIE
CCCCCCCHHHHHHHHHHCCCCHHCCCCCCCCEEECCCHHCCEEEEEEEECHHHHHHHHHH
KGMNLIIAHHSLLFQPLKQINMDTPKGRTVQKLIKNDITVYASHTNLDAANNGVNDMLAT
CCCEEEEEHHHHHHHHHHHCCCCCCCCHHHHHHHHCCEEEEEECCCCCCCCCCHHHHHHH
ELKLTHTTPLVPVYNEKNYKVVIYVPESHIEKIRQAFAESGAGYIGNYSHCTFQSPGQGT
EEEEECCCCEEEEECCCCCEEEEEECHHHHHHHHHHHHHCCCCCCCCCCEEEECCCCCCC
FKPLEGTDPYIGEQDKITYVDEYKIETIVPESILSNVVKSILSAHPYEEPAYDIYPLENK
CCCCCCCCCCCCCCCCEEEEECEEEEEECHHHHHHHHHHHHHHCCCCCCCCCEEEECCCC
TTNFGIGRIGNLTEPTTLDSFIKTVKTQFQLEGIRISGNKDKKIKRVAILGGSGEKYVSH
CCCCCCCCCCCCCCCCHHHHHHHHHHHHEEEEEEEECCCCCCCEEEEEEECCCCHHHHHH
AMRKKADVYITGDMTFHIAQDAAEMGLTVIDAGHYIEKVMKYYTKQKLAQTMELDKDFIE
HHHCCCCEEEECCEEEEEEHHHHHCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHH
VSEINTDPFQFV
HHCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8969508; 9384377 [H]