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The map label for this gene is spoVAF [H]

Identifier: 23099376

GI number: 23099376

Start: 1948080

End: 1949537

Strand: Reverse

Name: spoVAF [H]

Synonym: OB1921

Alternate gene names: 23099376

Gene position: 1949537-1948080 (Counterclockwise)

Preceding gene: 23099378

Following gene: 23099375

Centisome position: 53.7

GC content: 36.76

Gene sequence:

>1458_bases
ATGAAACAGGATAAAAGACCAATTGACCATAAATTAACAAACAACGTTACATTCCTAAAAAATTATTTAGGGGTTGAAAA
AAGTTTTGATTTAATTTATTTAGATTTAAATTATGCTGGTAAAGATATGGCTATGTTCATGGTTGATGGATTTGCCAAGG
ATGATATATCGTTATATATCATGCAAACGTTGGCTGAGCTAAAAGAGCATGAACTGGATGAAGACACGTTAACAAAACTA
CTTAAGAGATATATTCCCTATATAGAAATCGAACCAATAGATAATATTTATCAAGCTGCTGATTTTGTTTTAGCAGGAGC
AACTGCTTTATTTGTAGATGGTGTAGATAAAGCGATTATCATTGATTCAAGAACTTACCCTGCACGTTCACCTGAAGAAC
CAGATTTAGAAAGAGTGGTTCGAGGACCTAGAGATGGTTTTGTAGAAACTTTAGTATTTAATACCGCCTTAACAAGGAGA
CGGGTAAGAGATCGTTCACTTCGAATGGAATACTTACAGGTTGGTAGAAGGTCAAAAACAGACGTAGTCATAAGTAATAT
AGAAGATATTGCAGATAATAAACATATAGATAAAATAAAATCGATACTGGAAAGAATTGACACAGATGGTCTACCGATGG
CTGAAAAAACAATTGAAGAGTTTTTAAGTGATCGTTATTGGAATCCATATCCGTCTGTCCGATATACAGAGAGGCCAGAC
ACTGCTGCGGCACATTTATATGATGGGCATATATTATTAATTATTGATGGATCACCTAGTGTCATGATCACTGCAACTAC
GTTTTGGAATCACTTACAACATGCAGAAGAATATCGACAAAAGCCCACTGTTGGTGCTTACTTAAGAATGGTTCGTTTTT
TTGCAATTTTATTTTCAATGATATTATTGCCCTTATATTATTTGATGTCTTCACAGCCAGAGTTATTGCCAGCAGCCCTA
GAGTTTATTGGCCCTGATGATCCAGGAGTAATTCCTCTGCTGCTACAATTTTTAATAGCGGAAATAGGGTTAGATATGCT
AAGAATGGCTTCTATTCACACGCCTTCAGCATTAGGAACGGCGCTCGGTTTGGTGGCAGCAATCATGATCGGTGATGTCT
CCGTTCAAGTAGGCTGGTTTACGAATGAAGTAGTTCTATATATTGCTACTGCTGCAATAGGTTCTTATGCGACTCCTAGT
TATGAGCTAAGTATGGCAAACCGAATTGTACGTATTATATTATTACTCGCAACTGCAAGCTTCGGTGTGATTGGTTACGT
GCTAGGAATAACGTGTTGGCTATTGTACATTACAAAAATGAATACGTTCAAAATACCTTATTTTTGGCCATTTATTCCAT
TTTCACCAAAAGCGTTACGTGATGTTATTATCCGCGTACCAGTACCGATAAAGCATCGTCGCCCTGAAATATTAGACCCA
AAAGACCCGGATCGTTAA

Upstream 100 bases:

>100_bases
TTTATATATGATAATGAAAAAGAATATATGAAGGATTGTAGTATAGAAATTATAGTTCGTTATAAACTATTCATATCTTA
TAGATCATGGGTGGTAACGA

Downstream 100 bases:

>100_bases
CTGATTCGGGTTTTCGTCTGTTTAGTTCCCATTAATACAAGCTTTTGATATAATAATTTATGGTGATTAATTTGAAAACG
ATGATTGAAGTGCGAAATTT

Product: stage V sporulation protein AF

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 485; Mature: 485

Protein sequence:

>485_residues
MKQDKRPIDHKLTNNVTFLKNYLGVEKSFDLIYLDLNYAGKDMAMFMVDGFAKDDISLYIMQTLAELKEHELDEDTLTKL
LKRYIPYIEIEPIDNIYQAADFVLAGATALFVDGVDKAIIIDSRTYPARSPEEPDLERVVRGPRDGFVETLVFNTALTRR
RVRDRSLRMEYLQVGRRSKTDVVISNIEDIADNKHIDKIKSILERIDTDGLPMAEKTIEEFLSDRYWNPYPSVRYTERPD
TAAAHLYDGHILLIIDGSPSVMITATTFWNHLQHAEEYRQKPTVGAYLRMVRFFAILFSMILLPLYYLMSSQPELLPAAL
EFIGPDDPGVIPLLLQFLIAEIGLDMLRMASIHTPSALGTALGLVAAIMIGDVSVQVGWFTNEVVLYIATAAIGSYATPS
YELSMANRIVRIILLLATASFGVIGYVLGITCWLLYITKMNTFKIPYFWPFIPFSPKALRDVIIRVPVPIKHRRPEILDP
KDPDR

Sequences:

>Translated_485_residues
MKQDKRPIDHKLTNNVTFLKNYLGVEKSFDLIYLDLNYAGKDMAMFMVDGFAKDDISLYIMQTLAELKEHELDEDTLTKL
LKRYIPYIEIEPIDNIYQAADFVLAGATALFVDGVDKAIIIDSRTYPARSPEEPDLERVVRGPRDGFVETLVFNTALTRR
RVRDRSLRMEYLQVGRRSKTDVVISNIEDIADNKHIDKIKSILERIDTDGLPMAEKTIEEFLSDRYWNPYPSVRYTERPD
TAAAHLYDGHILLIIDGSPSVMITATTFWNHLQHAEEYRQKPTVGAYLRMVRFFAILFSMILLPLYYLMSSQPELLPAAL
EFIGPDDPGVIPLLLQFLIAEIGLDMLRMASIHTPSALGTALGLVAAIMIGDVSVQVGWFTNEVVLYIATAAIGSYATPS
YELSMANRIVRIILLLATASFGVIGYVLGITCWLLYITKMNTFKIPYFWPFIPFSPKALRDVIIRVPVPIKHRRPEILDP
KDPDR
>Mature_485_residues
MKQDKRPIDHKLTNNVTFLKNYLGVEKSFDLIYLDLNYAGKDMAMFMVDGFAKDDISLYIMQTLAELKEHELDEDTLTKL
LKRYIPYIEIEPIDNIYQAADFVLAGATALFVDGVDKAIIIDSRTYPARSPEEPDLERVVRGPRDGFVETLVFNTALTRR
RVRDRSLRMEYLQVGRRSKTDVVISNIEDIADNKHIDKIKSILERIDTDGLPMAEKTIEEFLSDRYWNPYPSVRYTERPD
TAAAHLYDGHILLIIDGSPSVMITATTFWNHLQHAEEYRQKPTVGAYLRMVRFFAILFSMILLPLYYLMSSQPELLPAAL
EFIGPDDPGVIPLLLQFLIAEIGLDMLRMASIHTPSALGTALGLVAAIMIGDVSVQVGWFTNEVVLYIATAAIGSYATPS
YELSMANRIVRIILLLATASFGVIGYVLGITCWLLYITKMNTFKIPYFWPFIPFSPKALRDVIIRVPVPIKHRRPEILDP
KDPDR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Probable) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the gerABKA family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004995 [H]

Pfam domain/function: PF03323 GerA [H]

EC number: NA

Molecular weight: Translated: 55177; Mature: 55177

Theoretical pI: Translated: 5.51; Mature: 5.51

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKQDKRPIDHKLTNNVTFLKNYLGVEKSFDLIYLDLNYAGKDMAMFMVDGFAKDDISLYI
CCCCCCCCCHHHHCCHHHHHHHHCCCCCCCEEEEEECCCCCCEEEEEECCCCCCCHHHHH
MQTLAELKEHELDEDTLTKLLKRYIPYIEIEPIDNIYQAADFVLAGATALFVDGVDKAII
HHHHHHHHHCCCCHHHHHHHHHHHCCEEEECCCHHHHHHHHHHHHHHHHEEECCCCCEEE
IDSRTYPARSPEEPDLERVVRGPRDGFVETLVFNTALTRRRVRDRSLRMEYLQVGRRSKT
EECCCCCCCCCCCCCHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
DVVISNIEDIADNKHIDKIKSILERIDTDGLPMAEKTIEEFLSDRYWNPYPSVRYTERPD
HHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCCCCCCEECCCCC
TAAAHLYDGHILLIIDGSPSVMITATTFWNHLQHAEEYRQKPTVGAYLRMVRFFAILFSM
CHHHEEECCEEEEEEECCCCEEEEEHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHH
ILLPLYYLMSSQPELLPAALEFIGPDDPGVIPLLLQFLIAEIGLDMLRMASIHTPSALGT
HHHHHHHHHCCCCCHHHHHHHHCCCCCCCHHHHHHHHHHHHHCHHHHHHHHCCCCHHHHH
ALGLVAAIMIGDVSVQVGWFTNEVVLYIATAAIGSYATPSYELSMANRIVRIILLLATAS
HHHHHHHHHHCCCEEEEEEECCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHH
FGVIGYVLGITCWLLYITKMNTFKIPYFWPFIPFSPKALRDVIIRVPVPIKHRRPEILDP
HHHHHHHHHHHHHHHHHHHCCCEECCEEECCCCCCHHHHHHHHHCCCCCCCCCCCCCCCC
KDPDR
CCCCC
>Mature Secondary Structure
MKQDKRPIDHKLTNNVTFLKNYLGVEKSFDLIYLDLNYAGKDMAMFMVDGFAKDDISLYI
CCCCCCCCCHHHHCCHHHHHHHHCCCCCCCEEEEEECCCCCCEEEEEECCCCCCCHHHHH
MQTLAELKEHELDEDTLTKLLKRYIPYIEIEPIDNIYQAADFVLAGATALFVDGVDKAII
HHHHHHHHHCCCCHHHHHHHHHHHCCEEEECCCHHHHHHHHHHHHHHHHEEECCCCCEEE
IDSRTYPARSPEEPDLERVVRGPRDGFVETLVFNTALTRRRVRDRSLRMEYLQVGRRSKT
EECCCCCCCCCCCCCHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
DVVISNIEDIADNKHIDKIKSILERIDTDGLPMAEKTIEEFLSDRYWNPYPSVRYTERPD
HHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCCCCCCEECCCCC
TAAAHLYDGHILLIIDGSPSVMITATTFWNHLQHAEEYRQKPTVGAYLRMVRFFAILFSM
CHHHEEECCEEEEEEECCCCEEEEEHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHH
ILLPLYYLMSSQPELLPAALEFIGPDDPGVIPLLLQFLIAEIGLDMLRMASIHTPSALGT
HHHHHHHHHCCCCCHHHHHHHHCCCCCCCHHHHHHHHHHHHHCHHHHHHHHCCCCHHHHH
ALGLVAAIMIGDVSVQVGWFTNEVVLYIATAAIGSYATPSYELSMANRIVRIILLLATAS
HHHHHHHHHHCCCEEEEEEECCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHH
FGVIGYVLGITCWLLYITKMNTFKIPYFWPFIPFSPKALRDVIIRVPVPIKHRRPEILDP
HHHHHHHHHHHHHHHHHHHCCCEECCEEECCCCCCHHHHHHHHHCCCCCCCCCCCCCCCC
KDPDR
CCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 8969508; 9384377; 7934829; 1368705; 3926949 [H]